Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Gm16356-201ENSMUST00000143300 169 ntBASIC-0.42□□□□□ -2.48
Trav2Q5R1I9 Gm22814-201ENSMUST00000157452 104 ntBASIC-0.42□□□□□ -2.48
Trav2Q5R1I9 Gm22553-201ENSMUST00000157797 295 ntBASIC-0.42□□□□□ -2.48
Trav2Q5R1I9 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.42□□□□□ -2.48
Trav2Q5R1I9 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.42□□□□□ -2.48
Trav2Q5R1I9 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.43□□□□□ -2.48
Trav2Q5R1I9 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.43□□□□□ -2.48
Trav2Q5R1I9 Gm27539-201ENSMUST00000184971 224 ntBASIC-0.43□□□□□ -2.48
Trav2Q5R1I9 Gm23614-201ENSMUST00000082598 107 ntBASIC-0.43□□□□□ -2.48
Trav2Q5R1I9 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.43□□□□□ -2.48
Trav2Q5R1I9 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.43□□□□□ -2.48
Trav2Q5R1I9 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.44□□□□□ -2.48
Trav2Q5R1I9 Gm15002-201ENSMUST00000118406 452 ntBASIC-0.44□□□□□ -2.48
Trav2Q5R1I9 Gm22999-201ENSMUST00000157082 88 ntBASIC-0.44□□□□□ -2.48
Trav2Q5R1I9 Gm22815-201ENSMUST00000157451 62 ntBASIC-0.44□□□□□ -2.48
Trav2Q5R1I9 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.44□□□□□ -2.48
Trav2Q5R1I9 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC-0.44□□□□□ -2.48
Trav2Q5R1I9 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.44□□□□□ -2.48
Trav2Q5R1I9 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.44□□□□□ -2.48
Trav2Q5R1I9 Gm26056-201ENSMUST00000083043 104 ntBASIC-0.44□□□□□ -2.48
Trav2Q5R1I9 Gm26111-201ENSMUST00000083969 106 ntBASIC-0.44□□□□□ -2.48
Trav2Q5R1I9 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.45□□□□□ -2.48
Trav2Q5R1I9 Gm28767-201ENSMUST00000188601 114 ntBASIC-0.45□□□□□ -2.48
Trav2Q5R1I9 Gm44959-201ENSMUST00000209127 231 ntBASIC-0.45□□□□□ -2.48
Trav2Q5R1I9 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.45□□□□□ -2.48
Trav2Q5R1I9 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.46□□□□□ -2.48
Trav2Q5R1I9 Gm23982-201ENSMUST00000157141 106 ntBASIC-0.46□□□□□ -2.48
Trav2Q5R1I9 Gm24504-201ENSMUST00000157679 100 ntBASIC-0.46□□□□□ -2.48
Trav2Q5R1I9 Gm22114-201ENSMUST00000177756 107 ntBASIC-0.46□□□□□ -2.48
Trav2Q5R1I9 Gm37338-201ENSMUST00000191986 127 ntBASIC-0.46□□□□□ -2.48
Trav2Q5R1I9 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.46□□□□□ -2.48
Trav2Q5R1I9 AC131720.2-201ENSMUST00000220420 431 ntBASIC-0.46□□□□□ -2.48
Trav2Q5R1I9 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.46□□□□□ -2.48
Trav2Q5R1I9 Gm25929-201ENSMUST00000082784 107 ntBASIC-0.46□□□□□ -2.48
Trav2Q5R1I9 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.46□□□□□ -2.48
Trav2Q5R1I9 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
Trav2Q5R1I9 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-0.47□□□□□ -2.48
Trav2Q5R1I9 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-0.47□□□□□ -2.48
Trav2Q5R1I9 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.47□□□□□ -2.48
Trav2Q5R1I9 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.47□□□□□ -2.48
Trav2Q5R1I9 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.47□□□□□ -2.48
Trav2Q5R1I9 Gm24559-201ENSMUST00000157519 121 ntBASIC-0.47□□□□□ -2.48
Trav2Q5R1I9 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.47□□□□□ -2.48
Trav2Q5R1I9 Snora19-201ENSMUST00000082962 132 ntBASIC-0.47□□□□□ -2.48
Trav2Q5R1I9 Gm23658-201ENSMUST00000083233 132 ntBASIC-0.47□□□□□ -2.48
Trav2Q5R1I9 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-0.47□□□□□ -2.48
Trav2Q5R1I9 Gm25611-201ENSMUST00000104017 133 ntBASIC-0.48□□□□□ -2.49
Trav2Q5R1I9 Gm24275-201ENSMUST00000116780 146 ntBASIC-0.48□□□□□ -2.49
Trav2Q5R1I9 Gm12770-201ENSMUST00000121734 462 ntBASIC-0.48□□□□□ -2.49
Trav2Q5R1I9 Gm28579-201ENSMUST00000186143 369 ntBASIC-0.48□□□□□ -2.49
Trav2Q5R1I9 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.48□□□□□ -2.49
Trav2Q5R1I9 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.49□□□□□ -2.49
Trav2Q5R1I9 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.49□□□□□ -2.49
Trav2Q5R1I9 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.49□□□□□ -2.49
Trav2Q5R1I9 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.49□□□□□ -2.49
Trav2Q5R1I9 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.49□□□□□ -2.49
Trav2Q5R1I9 Gm25827-201ENSMUST00000157089 107 ntBASIC-0.5□□□□□ -2.49
Trav2Q5R1I9 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.5□□□□□ -2.49
Trav2Q5R1I9 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.5□□□□□ -2.49
Trav2Q5R1I9 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.5□□□□□ -2.49
Trav2Q5R1I9 Snora75-201ENSMUST00000082903 133 ntBASIC-0.5□□□□□ -2.49
Trav2Q5R1I9 Mir759-201ENSMUST00000103254 98 ntBASIC-0.51□□□□□ -2.49
Trav2Q5R1I9 Gm26076-201ENSMUST00000104065 105 ntBASIC-0.51□□□□□ -2.49
Trav2Q5R1I9 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.51□□□□□ -2.49
Trav2Q5R1I9 Gm12797-201ENSMUST00000118645 273 ntBASIC-0.51□□□□□ -2.49
Trav2Q5R1I9 Gm11834-201ENSMUST00000122257 585 ntBASIC-0.51□□□□□ -2.49
Trav2Q5R1I9 Gm22097-201ENSMUST00000157929 278 ntBASIC-0.51□□□□□ -2.49
Trav2Q5R1I9 Gm23262-201ENSMUST00000158323 168 ntBASIC-0.51□□□□□ -2.49
Trav2Q5R1I9 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.51□□□□□ -2.49
Trav2Q5R1I9 Gm38280-201ENSMUST00000192610 158 ntBASIC-0.51□□□□□ -2.49
Trav2Q5R1I9 Gm6952-201ENSMUST00000118629 159 ntBASIC-0.52□□□□□ -2.49
Trav2Q5R1I9 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.52□□□□□ -2.49
Trav2Q5R1I9 Gm24635-201ENSMUST00000122712 128 ntBASIC-0.52□□□□□ -2.49
Trav2Q5R1I9 Gm23640-201ENSMUST00000157860 104 ntBASIC-0.52□□□□□ -2.49
Trav2Q5R1I9 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.52□□□□□ -2.49
Trav2Q5R1I9 CT025526.1-201ENSMUST00000217327 267 ntBASIC-0.52□□□□□ -2.49
Trav2Q5R1I9 AC162857.1-201ENSMUST00000226614 400 ntBASIC-0.52□□□□□ -2.49
Trav2Q5R1I9 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.52□□□□□ -2.49
Trav2Q5R1I9 Gm24204-201ENSMUST00000082950 107 ntBASIC-0.52□□□□□ -2.49
Trav2Q5R1I9 Gm25937-201ENSMUST00000083912 107 ntBASIC-0.52□□□□□ -2.49
Trav2Q5R1I9 Gm42606-201ENSMUST00000114209 239 ntBASIC-0.53□□□□□ -2.49
Trav2Q5R1I9 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.53□□□□□ -2.49
Trav2Q5R1I9 Gm24393-201ENSMUST00000158135 97 ntBASIC-0.53□□□□□ -2.49
Trav2Q5R1I9 Gm25414-201ENSMUST00000101814 107 ntBASIC-0.54□□□□□ -2.5
Trav2Q5R1I9 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.54□□□□□ -2.5
Trav2Q5R1I9 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.54□□□□□ -2.5
Trav2Q5R1I9 Gm23779-201ENSMUST00000157938 64 ntBASIC-0.54□□□□□ -2.5
Trav2Q5R1I9 Gm22767-201ENSMUST00000158365 165 ntBASIC-0.54□□□□□ -2.5
Trav2Q5R1I9 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.54□□□□□ -2.5
Trav2Q5R1I9 Gm23793-201ENSMUST00000179396 117 ntBASIC-0.54□□□□□ -2.5
Trav2Q5R1I9 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.54□□□□□ -2.5
Trav2Q5R1I9 AC159896.1-201ENSMUST00000215264 215 ntBASIC-0.54□□□□□ -2.5
Trav2Q5R1I9 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.54□□□□□ -2.5
Trav2Q5R1I9 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-0.54□□□□□ -2.5
Trav2Q5R1I9 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.55□□□□□ -2.5
Trav2Q5R1I9 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.55□□□□□ -2.5
Trav2Q5R1I9 Mir669k-201ENSMUST00000177742 127 ntBASIC-0.55□□□□□ -2.5
Trav2Q5R1I9 Gm25615-201ENSMUST00000177836 94 ntBASIC-0.55□□□□□ -2.5
Trav2Q5R1I9 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.55□□□□□ -2.5
Trav2Q5R1I9 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 76,532 protein–RNA pairs in 196.5 ms