Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm12924-201ENSMUST00000121747 318 ntBASIC0.03□□□□□ -2.4
Trav3-3Q5R1C3 Gm24392-201ENSMUST00000158136 103 ntBASIC0.03□□□□□ -2.4
Trav3-3Q5R1C3 Gm23761-201ENSMUST00000158347 104 ntBASIC0.03□□□□□ -2.4
Trav3-3Q5R1C3 Gm26402-201ENSMUST00000158499 113 ntBASIC0.03□□□□□ -2.4
Trav3-3Q5R1C3 Gm26287-201ENSMUST00000158887 81 ntBASIC0.03□□□□□ -2.4
Trav3-3Q5R1C3 Gm24667-201ENSMUST00000158938 103 ntBASIC0.03□□□□□ -2.4
Trav3-3Q5R1C3 Mir100-201ENSMUST00000175270 80 ntBASIC0.03□□□□□ -2.4
Trav3-3Q5R1C3 Gm27521-201ENSMUST00000184022 64 ntBASIC0.03□□□□□ -2.4
Trav3-3Q5R1C3 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.03□□□□□ -2.4
Trav3-3Q5R1C3 AC192333.1-201ENSMUST00000224573 376 ntBASIC0.03□□□□□ -2.4
Trav3-3Q5R1C3 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.03□□□□□ -2.4
Trav3-3Q5R1C3 Gm22686-201ENSMUST00000082847 100 ntBASIC0.03□□□□□ -2.4
Trav3-3Q5R1C3 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.02□□□□□ -2.41
Trav3-3Q5R1C3 Gm25274-201ENSMUST00000104296 135 ntBASIC0.02□□□□□ -2.41
Trav3-3Q5R1C3 Gm22051-201ENSMUST00000117002 127 ntBASIC0.02□□□□□ -2.41
Trav3-3Q5R1C3 Gm25444-201ENSMUST00000158999 113 ntBASIC0.02□□□□□ -2.41
Trav3-3Q5R1C3 Mir669k-201ENSMUST00000177742 127 ntBASIC0.02□□□□□ -2.41
Trav3-3Q5R1C3 Gm25673-201ENSMUST00000179957 127 ntBASIC0.02□□□□□ -2.41
Trav3-3Q5R1C3 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
Trav3-3Q5R1C3 Gm44977-201ENSMUST00000205283 420 ntBASIC0.02□□□□□ -2.41
Trav3-3Q5R1C3 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0.02□□□□□ -2.41
Trav3-3Q5R1C3 Mir224-201ENSMUST00000083608 82 ntBASIC0.02□□□□□ -2.41
Trav3-3Q5R1C3 Gm22003-201ENSMUST00000101885 107 ntBASIC0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm23991-201ENSMUST00000117033 93 ntBASIC0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm22999-201ENSMUST00000157082 88 ntBASIC0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm23821-201ENSMUST00000158738 106 ntBASIC0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm16546-201ENSMUST00000159442 355 ntBASIC0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm23410-201ENSMUST00000179967 107 ntBASIC0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm22756-201ENSMUST00000180118 107 ntBASIC0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
Trav3-3Q5R1C3 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm44458-201ENSMUST00000196594 143 ntBASIC0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm42506-201ENSMUST00000202009 150 ntBASIC0.01□□□□□ -2.41
Trav3-3Q5R1C3 AC154552.1-201ENSMUST00000222969 202 ntBASIC0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm26447-201ENSMUST00000082448 129 ntBASIC0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm23406-201ENSMUST00000082537 122 ntBASIC0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm22505-201ENSMUST00000082956 108 ntBASIC0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm22363-201ENSMUST00000083100 108 ntBASIC0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm23814-201ENSMUST00000083230 102 ntBASIC0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm23095-201ENSMUST00000083446 107 ntBASIC0.01□□□□□ -2.41
Trav3-3Q5R1C3 Mir410-201ENSMUST00000083563 81 ntBASIC0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm26293-201ENSMUST00000104170 84 ntBASIC0□□□□□ -2.41
Trav3-3Q5R1C3 Gm22080-201ENSMUST00000157591 106 ntBASIC0□□□□□ -2.41
Trav3-3Q5R1C3 Gm24575-201ENSMUST00000175502 77 ntBASIC0□□□□□ -2.41
Trav3-3Q5R1C3 Gm25703-201ENSMUST00000083123 151 ntBASIC0□□□□□ -2.41
Trav3-3Q5R1C3 Gm23321-201ENSMUST00000104465 126 ntBASIC-0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm25848-201ENSMUST00000116790 144 ntBASIC-0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm22815-201ENSMUST00000157451 62 ntBASIC-0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm25771-201ENSMUST00000158565 144 ntBASIC-0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm28008-201ENSMUST00000184021 186 ntBASIC-0.01□□□□□ -2.41
Trav3-3Q5R1C3 Mir6394-201ENSMUST00000184738 99 ntBASIC-0.01□□□□□ -2.41
Trav3-3Q5R1C3 Gm23301-201ENSMUST00000082713 65 ntBASIC-0.01□□□□□ -2.41
Trav3-3Q5R1C3 Snord95-201ENSMUST00000082846 68 ntBASIC-0.01□□□□□ -2.41
Trav3-3Q5R1C3 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC-0.02□□□□□ -2.41
Trav3-3Q5R1C3 Gm11904-201ENSMUST00000120562 248 ntBASIC-0.02□□□□□ -2.41
Trav3-3Q5R1C3 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC-0.02□□□□□ -2.41
Trav3-3Q5R1C3 Mir7077-201ENSMUST00000183991 57 ntBASIC-0.02□□□□□ -2.41
Trav3-3Q5R1C3 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.02□□□□□ -2.41
Trav3-3Q5R1C3 Gm27668-201ENSMUST00000184188 120 ntBASIC-0.02□□□□□ -2.41
Trav3-3Q5R1C3 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.02□□□□□ -2.41
Trav3-3Q5R1C3 Gm24423-201ENSMUST00000101982 106 ntBASIC-0.03□□□□□ -2.41
Trav3-3Q5R1C3 Gm25611-201ENSMUST00000104017 133 ntBASIC-0.03□□□□□ -2.41
Trav3-3Q5R1C3 Gm25718-201ENSMUST00000158632 118 ntBASIC-0.03□□□□□ -2.41
Trav3-3Q5R1C3 Gm25235-201ENSMUST00000179933 107 ntBASIC-0.03□□□□□ -2.41
Trav3-3Q5R1C3 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.03□□□□□ -2.41
Trav3-3Q5R1C3 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
Trav3-3Q5R1C3 Gm22571-201ENSMUST00000082984 70 ntBASIC-0.03□□□□□ -2.41
Trav3-3Q5R1C3 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.03□□□□□ -2.41
Trav3-3Q5R1C3 Gm24278-201ENSMUST00000104239 127 ntBASIC-0.04□□□□□ -2.42
Trav3-3Q5R1C3 Gm6952-201ENSMUST00000118629 159 ntBASIC-0.04□□□□□ -2.42
Trav3-3Q5R1C3 Gm23219-201ENSMUST00000158123 87 ntBASIC-0.04□□□□□ -2.42
Trav3-3Q5R1C3 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.04□□□□□ -2.42
Trav3-3Q5R1C3 Gm27672-201ENSMUST00000183751 204 ntBASIC-0.04□□□□□ -2.42
Trav3-3Q5R1C3 Gm45313-201ENSMUST00000210584 178 ntBASIC-0.04□□□□□ -2.42
Trav3-3Q5R1C3 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.04□□□□□ -2.42
Trav3-3Q5R1C3 Mirlet7g-201ENSMUST00000083506 88 ntBASIC-0.04□□□□□ -2.42
Trav3-3Q5R1C3 Mir411-201ENSMUST00000083543 82 ntBASIC-0.04□□□□□ -2.42
Trav3-3Q5R1C3 Gm10222-201ENSMUST00000088336 294 ntBASIC-0.04□□□□□ -2.42
Trav3-3Q5R1C3 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.05□□□□□ -2.42
Trav3-3Q5R1C3 Gm14039-201ENSMUST00000118705 101 ntBASIC-0.05□□□□□ -2.42
Trav3-3Q5R1C3 Gm26159-201ENSMUST00000158968 104 ntBASIC-0.05□□□□□ -2.42
Trav3-3Q5R1C3 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.05□□□□□ -2.42
Trav3-3Q5R1C3 Mir6985-201ENSMUST00000184641 61 ntBASIC-0.05□□□□□ -2.42
Trav3-3Q5R1C3 Gm27943-201ENSMUST00000184844 116 ntBASIC-0.05□□□□□ -2.42
Trav3-3Q5R1C3 Gm28767-201ENSMUST00000188601 114 ntBASIC-0.05□□□□□ -2.42
Trav3-3Q5R1C3 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.05□□□□□ -2.42
Trav3-3Q5R1C3 Mir721-201ENSMUST00000200230 88 ntBASIC-0.05□□□□□ -2.42
Trav3-3Q5R1C3 Gm13345-201ENSMUST00000121928 228 ntBASIC-0.06□□□□□ -2.42
Trav3-3Q5R1C3 Gm24006-201ENSMUST00000158462 132 ntBASIC-0.06□□□□□ -2.42
Trav3-3Q5R1C3 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.06□□□□□ -2.42
Trav3-3Q5R1C3 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.06□□□□□ -2.42
Trav3-3Q5R1C3 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.06□□□□□ -2.42
Trav3-3Q5R1C3 Gm43505-201ENSMUST00000200579 139 ntBASIC-0.06□□□□□ -2.42
Trav3-3Q5R1C3 Gm23126-201ENSMUST00000104260 134 ntBASIC-0.07□□□□□ -2.42
Trav3-3Q5R1C3 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.07□□□□□ -2.42
Trav3-3Q5R1C3 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.07□□□□□ -2.42
Trav3-3Q5R1C3 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.07□□□□□ -2.42
Trav3-3Q5R1C3 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.07□□□□□ -2.42
Trav3-3Q5R1C3 Gm27402-201ENSMUST00000183890 120 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 139.9 ms