Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm28016-201ENSMUST00000184594 196 ntBASIC0.37□□□□□ -2.35
Trav8d-2Q5R1B6 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Trav8d-2Q5R1B6 Gm43432-201ENSMUST00000196352 121 ntBASIC0.37□□□□□ -2.35
Trav8d-2Q5R1B6 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.37□□□□□ -2.35
Trav8d-2Q5R1B6 Gm22048-201ENSMUST00000104721 89 ntBASIC0.36□□□□□ -2.35
Trav8d-2Q5R1B6 Gm15069-201ENSMUST00000117792 192 ntBASIC0.36□□□□□ -2.35
Trav8d-2Q5R1B6 Gm15068-201ENSMUST00000119796 192 ntBASIC0.36□□□□□ -2.35
Trav8d-2Q5R1B6 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Trav8d-2Q5R1B6 Gm12771-201ENSMUST00000120246 135 ntBASIC0.36□□□□□ -2.35
Trav8d-2Q5R1B6 Gm11904-201ENSMUST00000120562 248 ntBASIC0.36□□□□□ -2.35
Trav8d-2Q5R1B6 Gm25664-201ENSMUST00000157697 107 ntBASIC0.36□□□□□ -2.35
Trav8d-2Q5R1B6 Gm24423-201ENSMUST00000101982 106 ntBASIC0.35□□□□□ -2.35
Trav8d-2Q5R1B6 Gm26303-201ENSMUST00000116845 119 ntBASIC0.35□□□□□ -2.35
Trav8d-2Q5R1B6 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.35□□□□□ -2.35
Trav8d-2Q5R1B6 Gm28579-201ENSMUST00000186143 369 ntBASIC0.35□□□□□ -2.35
Trav8d-2Q5R1B6 Gm44211-201ENSMUST00000204867 145 ntBASIC0.35□□□□□ -2.35
Trav8d-2Q5R1B6 Gm26447-201ENSMUST00000082448 129 ntBASIC0.35□□□□□ -2.35
Trav8d-2Q5R1B6 Gm25634-201ENSMUST00000082667 105 ntBASIC0.35□□□□□ -2.35
Trav8d-2Q5R1B6 Gm10222-201ENSMUST00000088336 294 ntBASIC0.35□□□□□ -2.35
Trav8d-2Q5R1B6 Snord69-201ENSMUST00000104024 80 ntBASIC0.34□□□□□ -2.36
Trav8d-2Q5R1B6 Gm13797-201ENSMUST00000121792 120 ntBASIC0.34□□□□□ -2.36
Trav8d-2Q5R1B6 Gm16307-201ENSMUST00000161269 210 ntBASIC0.34□□□□□ -2.36
Trav8d-2Q5R1B6 Gm44977-201ENSMUST00000205283 420 ntBASIC0.34□□□□□ -2.36
Trav8d-2Q5R1B6 Gm23969-201ENSMUST00000083324 74 ntBASIC0.34□□□□□ -2.36
Trav8d-2Q5R1B6 Mir547-201ENSMUST00000102051 78 ntBASIC0.33□□□□□ -2.36
Trav8d-2Q5R1B6 Gm24559-201ENSMUST00000157519 121 ntBASIC0.33□□□□□ -2.36
Trav8d-2Q5R1B6 Gm23219-201ENSMUST00000158123 87 ntBASIC0.33□□□□□ -2.36
Trav8d-2Q5R1B6 Gm22836-201ENSMUST00000158441 61 ntBASIC0.33□□□□□ -2.36
Trav8d-2Q5R1B6 Gm17919-201ENSMUST00000173344 312 ntBASIC0.33□□□□□ -2.36
Trav8d-2Q5R1B6 Gm7240-201ENSMUST00000220769 664 ntBASIC0.33□□□□□ -2.36
Trav8d-2Q5R1B6 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.32□□□□□ -2.36
Trav8d-2Q5R1B6 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.32□□□□□ -2.36
Trav8d-2Q5R1B6 Gm25828-201ENSMUST00000157087 95 ntBASIC0.32□□□□□ -2.36
Trav8d-2Q5R1B6 Gm25882-201ENSMUST00000157784 85 ntBASIC0.32□□□□□ -2.36
Trav8d-2Q5R1B6 Gm22767-201ENSMUST00000158365 165 ntBASIC0.32□□□□□ -2.36
Trav8d-2Q5R1B6 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.32□□□□□ -2.36
Trav8d-2Q5R1B6 Gm29107-201ENSMUST00000190910 347 ntBASIC0.32□□□□□ -2.36
Trav8d-2Q5R1B6 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.32□□□□□ -2.36
Trav8d-2Q5R1B6 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC0.32□□□□□ -2.36
Trav8d-2Q5R1B6 Gm26326-201ENSMUST00000083070 129 ntBASIC0.32□□□□□ -2.36
Trav8d-2Q5R1B6 Mir30a-201ENSMUST00000083471 71 ntBASIC0.32□□□□□ -2.36
Trav8d-2Q5R1B6 Gm15289-201ENSMUST00000117793 244 ntBASIC0.31□□□□□ -2.36
Trav8d-2Q5R1B6 Gm13922-201ENSMUST00000119505 156 ntBASIC0.31□□□□□ -2.36
Trav8d-2Q5R1B6 Gm25318-201ENSMUST00000122554 314 ntBASIC0.31□□□□□ -2.36
Trav8d-2Q5R1B6 Gm25323-201ENSMUST00000122555 103 ntBASIC0.31□□□□□ -2.36
Trav8d-2Q5R1B6 Gm22479-201ENSMUST00000122566 81 ntBASIC0.31□□□□□ -2.36
Trav8d-2Q5R1B6 Gm24635-201ENSMUST00000122712 128 ntBASIC0.31□□□□□ -2.36
Trav8d-2Q5R1B6 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.31□□□□□ -2.36
Trav8d-2Q5R1B6 Gm25393-201ENSMUST00000157336 285 ntBASIC0.31□□□□□ -2.36
Trav8d-2Q5R1B6 Gm25885-201ENSMUST00000157779 109 ntBASIC0.31□□□□□ -2.36
Trav8d-2Q5R1B6 Gm23020-201ENSMUST00000158766 253 ntBASIC0.31□□□□□ -2.36
Trav8d-2Q5R1B6 Gm25241-201ENSMUST00000174909 84 ntBASIC0.31□□□□□ -2.36
Trav8d-2Q5R1B6 Gm26217-201ENSMUST00000175212 84 ntBASIC0.31□□□□□ -2.36
Trav8d-2Q5R1B6 Gm23416-201ENSMUST00000175520 95 ntBASIC0.31□□□□□ -2.36
Trav8d-2Q5R1B6 Gm23002-201ENSMUST00000179221 107 ntBASIC0.31□□□□□ -2.36
Trav8d-2Q5R1B6 Gm25235-201ENSMUST00000179933 107 ntBASIC0.31□□□□□ -2.36
Trav8d-2Q5R1B6 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Trav8d-2Q5R1B6 Gm44055-201ENSMUST00000204376 247 ntBASIC0.31□□□□□ -2.36
Trav8d-2Q5R1B6 Gm25814-201ENSMUST00000082754 107 ntBASIC0.31□□□□□ -2.36
Trav8d-2Q5R1B6 Mir181b-2-201ENSMUST00000083644 89 ntBASIC0.31□□□□□ -2.36
Trav8d-2Q5R1B6 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
Trav8d-2Q5R1B6 Gm26402-201ENSMUST00000158499 113 ntBASIC0.3□□□□□ -2.36
Trav8d-2Q5R1B6 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.3□□□□□ -2.36
Trav8d-2Q5R1B6 Gm25110-201ENSMUST00000116684 121 ntBASIC0.29□□□□□ -2.36
Trav8d-2Q5R1B6 Gm25775-201ENSMUST00000116716 121 ntBASIC0.29□□□□□ -2.36
Trav8d-2Q5R1B6 Gm24795-201ENSMUST00000116737 121 ntBASIC0.29□□□□□ -2.36
Trav8d-2Q5R1B6 Gm25171-201ENSMUST00000116926 121 ntBASIC0.29□□□□□ -2.36
Trav8d-2Q5R1B6 Gm22051-201ENSMUST00000117002 127 ntBASIC0.29□□□□□ -2.36
Trav8d-2Q5R1B6 Gm11204-201ENSMUST00000122438 147 ntBASIC0.29□□□□□ -2.36
Trav8d-2Q5R1B6 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.29□□□□□ -2.36
Trav8d-2Q5R1B6 Mir6377-201ENSMUST00000183760 114 ntBASIC0.29□□□□□ -2.36
Trav8d-2Q5R1B6 Gm25512-201ENSMUST00000083863 107 ntBASIC0.29□□□□□ -2.36
Trav8d-2Q5R1B6 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
Trav8d-2Q5R1B6 Gm23214-201ENSMUST00000122716 157 ntBASIC0.28□□□□□ -2.36
Trav8d-2Q5R1B6 Gm23838-201ENSMUST00000158067 162 ntBASIC0.28□□□□□ -2.36
Trav8d-2Q5R1B6 Gm23763-201ENSMUST00000158345 60 ntBASIC0.28□□□□□ -2.36
Trav8d-2Q5R1B6 Gm24500-201ENSMUST00000158447 124 ntBASIC0.28□□□□□ -2.36
Trav8d-2Q5R1B6 Gm22686-201ENSMUST00000082847 100 ntBASIC0.28□□□□□ -2.36
Trav8d-2Q5R1B6 Mir141-201ENSMUST00000083540 72 ntBASIC0.28□□□□□ -2.36
Trav8d-2Q5R1B6 Gm23345-201ENSMUST00000083817 150 ntBASIC0.28□□□□□ -2.36
Trav8d-2Q5R1B6 Gm23655-201ENSMUST00000122627 105 ntBASIC0.27□□□□□ -2.37
Trav8d-2Q5R1B6 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.27□□□□□ -2.37
Trav8d-2Q5R1B6 Gm22216-201ENSMUST00000157557 114 ntBASIC0.27□□□□□ -2.37
Trav8d-2Q5R1B6 Gm22706-201ENSMUST00000157907 112 ntBASIC0.27□□□□□ -2.37
Trav8d-2Q5R1B6 Gm27747-201ENSMUST00000184707 85 ntBASIC0.27□□□□□ -2.37
Trav8d-2Q5R1B6 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.27□□□□□ -2.37
Trav8d-2Q5R1B6 Gm26123-201ENSMUST00000083363 135 ntBASIC0.27□□□□□ -2.37
Trav8d-2Q5R1B6 Mir181a-2-201ENSMUST00000083489 76 ntBASIC0.27□□□□□ -2.37
Trav8d-2Q5R1B6 Gm26076-201ENSMUST00000104065 105 ntBASIC0.26□□□□□ -2.37
Trav8d-2Q5R1B6 Mir875-201ENSMUST00000104698 78 ntBASIC0.26□□□□□ -2.37
Trav8d-2Q5R1B6 Gm23989-201ENSMUST00000117030 66 ntBASIC0.26□□□□□ -2.37
Trav8d-2Q5R1B6 Gm24509-201ENSMUST00000157086 101 ntBASIC0.26□□□□□ -2.37
Trav8d-2Q5R1B6 Gm25358-201ENSMUST00000157189 101 ntBASIC0.26□□□□□ -2.37
Trav8d-2Q5R1B6 Gm22983-201ENSMUST00000158308 104 ntBASIC0.26□□□□□ -2.37
Trav8d-2Q5R1B6 Gm24006-201ENSMUST00000158462 132 ntBASIC0.26□□□□□ -2.37
Trav8d-2Q5R1B6 Gm24549-201ENSMUST00000158647 139 ntBASIC0.26□□□□□ -2.37
Trav8d-2Q5R1B6 Gm24764-201ENSMUST00000083686 199 ntBASIC0.26□□□□□ -2.37
Trav8d-2Q5R1B6 Gm25111-201ENSMUST00000116686 147 ntBASIC0.25□□□□□ -2.37
Trav8d-2Q5R1B6 Gm14792-201ENSMUST00000119725 258 ntBASIC0.25□□□□□ -2.37
Trav8d-2Q5R1B6 Gm23466-201ENSMUST00000157133 106 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 154.9 ms