Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm26401-201ENSMUST00000158502 76 ntBASIC-0.07□□□□□ -2.42
Upf3bQ3ULL6 Gm25241-201ENSMUST00000174909 84 ntBASIC-0.07□□□□□ -2.42
Upf3bQ3ULL6 Gm26217-201ENSMUST00000175212 84 ntBASIC-0.07□□□□□ -2.42
Upf3bQ3ULL6 Gm6003-201ENSMUST00000187903 463 ntBASIC-0.07□□□□□ -2.42
Upf3bQ3ULL6 AC159896.1-201ENSMUST00000215264 215 ntBASIC-0.07□□□□□ -2.42
Upf3bQ3ULL6 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.07□□□□□ -2.42
Upf3bQ3ULL6 n-R5s94-201ENSMUST00000082573 119 ntBASIC-0.07□□□□□ -2.42
Upf3bQ3ULL6 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.07□□□□□ -2.42
Upf3bQ3ULL6 Gm22753-201ENSMUST00000083657 107 ntBASIC-0.07□□□□□ -2.42
Upf3bQ3ULL6 Mir672-201ENSMUST00000102331 100 ntBASIC-0.08□□□□□ -2.42
Upf3bQ3ULL6 Gm22984-201ENSMUST00000122751 122 ntBASIC-0.08□□□□□ -2.42
Upf3bQ3ULL6 Gm24498-201ENSMUST00000158445 102 ntBASIC-0.08□□□□□ -2.42
Upf3bQ3ULL6 Mir6390-201ENSMUST00000184405 129 ntBASIC-0.08□□□□□ -2.42
Upf3bQ3ULL6 Gm15069-201ENSMUST00000117792 192 ntBASIC-0.09□□□□□ -2.42
Upf3bQ3ULL6 Gm15068-201ENSMUST00000119796 192 ntBASIC-0.09□□□□□ -2.42
Upf3bQ3ULL6 Gm28489-201ENSMUST00000186655 316 ntBASIC-0.09□□□□□ -2.42
Upf3bQ3ULL6 Gm44455-201ENSMUST00000200061 82 ntBASIC-0.09□□□□□ -2.42
Upf3bQ3ULL6 AC159619.2-201ENSMUST00000222924 401 ntBASIC-0.09□□□□□ -2.42
Upf3bQ3ULL6 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.1□□□□□ -2.43
Upf3bQ3ULL6 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.1□□□□□ -2.43
Upf3bQ3ULL6 Gm26076-201ENSMUST00000104065 105 ntBASIC-0.11□□□□□ -2.43
Upf3bQ3ULL6 Gm24559-201ENSMUST00000157519 121 ntBASIC-0.11□□□□□ -2.43
Upf3bQ3ULL6 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.11□□□□□ -2.43
Upf3bQ3ULL6 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.11□□□□□ -2.43
Upf3bQ3ULL6 Gm27317-201ENSMUST00000183533 95 ntBASIC-0.11□□□□□ -2.43
Upf3bQ3ULL6 Gm28927-201ENSMUST00000191528 272 ntBASIC-0.11□□□□□ -2.43
Upf3bQ3ULL6 CT030645.1-201ENSMUST00000224020 231 ntBASIC-0.11□□□□□ -2.43
Upf3bQ3ULL6 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.11□□□□□ -2.43
Upf3bQ3ULL6 Snord82-201ENSMUST00000082889 70 ntBASIC-0.11□□□□□ -2.43
Upf3bQ3ULL6 Gm26123-201ENSMUST00000083363 135 ntBASIC-0.11□□□□□ -2.43
Upf3bQ3ULL6 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
Upf3bQ3ULL6 Gm25773-201ENSMUST00000116718 127 ntBASIC-0.12□□□□□ -2.43
Upf3bQ3ULL6 Gm25444-201ENSMUST00000158999 113 ntBASIC-0.12□□□□□ -2.43
Upf3bQ3ULL6 Mir100-201ENSMUST00000175270 80 ntBASIC-0.12□□□□□ -2.43
Upf3bQ3ULL6 Gm24575-201ENSMUST00000175502 77 ntBASIC-0.12□□□□□ -2.43
Upf3bQ3ULL6 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.12□□□□□ -2.43
Upf3bQ3ULL6 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-0.12□□□□□ -2.43
Upf3bQ3ULL6 Gm26479-201ENSMUST00000122620 106 ntBASIC-0.13□□□□□ -2.43
Upf3bQ3ULL6 Gm24501-201ENSMUST00000158452 62 ntBASIC-0.13□□□□□ -2.43
Upf3bQ3ULL6 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC-0.13□□□□□ -2.43
Upf3bQ3ULL6 Gm25142-201ENSMUST00000082698 107 ntBASIC-0.13□□□□□ -2.43
Upf3bQ3ULL6 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-0.13□□□□□ -2.43
Upf3bQ3ULL6 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
Upf3bQ3ULL6 Gm24278-201ENSMUST00000104239 127 ntBASIC-0.14□□□□□ -2.43
Upf3bQ3ULL6 Gm28579-201ENSMUST00000186143 369 ntBASIC-0.14□□□□□ -2.43
Upf3bQ3ULL6 Gm29665-201ENSMUST00000191457 528 ntBASIC-0.14□□□□□ -2.43
Upf3bQ3ULL6 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC-0.14□□□□□ -2.43
Upf3bQ3ULL6 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.14□□□□□ -2.43
Upf3bQ3ULL6 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.14□□□□□ -2.43
Upf3bQ3ULL6 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.15□□□□□ -2.43
Upf3bQ3ULL6 Gm27723-201ENSMUST00000157398 63 ntBASIC-0.15□□□□□ -2.43
Upf3bQ3ULL6 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.15□□□□□ -2.43
Upf3bQ3ULL6 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.15□□□□□ -2.43
Upf3bQ3ULL6 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC-0.15□□□□□ -2.43
Upf3bQ3ULL6 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.15□□□□□ -2.43
Upf3bQ3ULL6 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.16□□□□□ -2.44
Upf3bQ3ULL6 Gm13922-201ENSMUST00000119505 156 ntBASIC-0.16□□□□□ -2.44
Upf3bQ3ULL6 Gm25828-201ENSMUST00000157087 95 ntBASIC-0.16□□□□□ -2.44
Upf3bQ3ULL6 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.16□□□□□ -2.44
Upf3bQ3ULL6 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.16□□□□□ -2.44
Upf3bQ3ULL6 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.16□□□□□ -2.44
Upf3bQ3ULL6 Mir191-201ENSMUST00000196210 74 ntBASIC-0.16□□□□□ -2.44
Upf3bQ3ULL6 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC-0.16□□□□□ -2.44
Upf3bQ3ULL6 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-0.16□□□□□ -2.44
Upf3bQ3ULL6 Gm44989-201ENSMUST00000204749 217 ntBASIC-0.16□□□□□ -2.44
Upf3bQ3ULL6 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.16□□□□□ -2.44
Upf3bQ3ULL6 CT030170.3-201ENSMUST00000221205 1815 ntBASIC-0.16□□□□□ -2.44
Upf3bQ3ULL6 Gm26255-201ENSMUST00000122492 103 ntBASIC-0.17□□□□□ -2.44
Upf3bQ3ULL6 Gm24635-201ENSMUST00000122712 128 ntBASIC-0.17□□□□□ -2.44
Upf3bQ3ULL6 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.17□□□□□ -2.44
Upf3bQ3ULL6 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
Upf3bQ3ULL6 Gm7240-201ENSMUST00000220769 664 ntBASIC-0.17□□□□□ -2.44
Upf3bQ3ULL6 Gm24316-201ENSMUST00000083041 107 ntBASIC-0.17□□□□□ -2.44
Upf3bQ3ULL6 Gm22767-201ENSMUST00000158365 165 ntBASIC-0.18□□□□□ -2.44
Upf3bQ3ULL6 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.18□□□□□ -2.44
Upf3bQ3ULL6 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.18□□□□□ -2.44
Upf3bQ3ULL6 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.18□□□□□ -2.44
Upf3bQ3ULL6 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.18□□□□□ -2.44
Upf3bQ3ULL6 Gm22118-201ENSMUST00000175593 171 ntBASIC-0.18□□□□□ -2.44
Upf3bQ3ULL6 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.18□□□□□ -2.44
Upf3bQ3ULL6 Gm25793-201ENSMUST00000083287 107 ntBASIC-0.18□□□□□ -2.44
Upf3bQ3ULL6 Mirlet7g-201ENSMUST00000083506 88 ntBASIC-0.18□□□□□ -2.44
Upf3bQ3ULL6 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.18□□□□□ -2.44
Upf3bQ3ULL6 Gm25611-201ENSMUST00000104017 133 ntBASIC-0.19□□□□□ -2.44
Upf3bQ3ULL6 Gm27943-201ENSMUST00000184844 116 ntBASIC-0.19□□□□□ -2.44
Upf3bQ3ULL6 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.19□□□□□ -2.44
Upf3bQ3ULL6 Gm44563-201ENSMUST00000207958 178 ntBASIC-0.19□□□□□ -2.44
Upf3bQ3ULL6 Mir377-201ENSMUST00000083504 68 ntBASIC-0.19□□□□□ -2.44
Upf3bQ3ULL6 Gm6952-201ENSMUST00000118629 159 ntBASIC-0.2□□□□□ -2.44
Upf3bQ3ULL6 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.2□□□□□ -2.44
Upf3bQ3ULL6 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.2□□□□□ -2.44
Upf3bQ3ULL6 Gm22450-201ENSMUST00000179641 107 ntBASIC-0.2□□□□□ -2.44
Upf3bQ3ULL6 Gm25473-201ENSMUST00000180191 107 ntBASIC-0.2□□□□□ -2.44
Upf3bQ3ULL6 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.2□□□□□ -2.44
Upf3bQ3ULL6 Gm24856-201ENSMUST00000082809 107 ntBASIC-0.2□□□□□ -2.44
Upf3bQ3ULL6 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.2□□□□□ -2.44
Upf3bQ3ULL6 Gm24521-201ENSMUST00000083958 107 ntBASIC-0.2□□□□□ -2.44
Upf3bQ3ULL6 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
Upf3bQ3ULL6 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.21□□□□□ -2.44
Upf3bQ3ULL6 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-0.21□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 2051.4 ms