Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm44358-201ENSMUST00000196301 98 ntBASIC2.19□□□□□ -2.06
Rnf180Q3U827 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC2.19□□□□□ -2.06
Rnf180Q3U827 Gm43602-201ENSMUST00000196772 300 ntBASIC2.19□□□□□ -2.06
Rnf180Q3U827 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.19□□□□□ -2.06
Rnf180Q3U827 Snora3-201ENSMUST00000083082 132 ntBASIC2.19□□□□□ -2.06
Rnf180Q3U827 Mir489-201ENSMUST00000093599 107 ntBASIC2.19□□□□□ -2.06
Rnf180Q3U827 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Rnf180Q3U827 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.18□□□□□ -2.06
Rnf180Q3U827 Gm14671-201ENSMUST00000121790 262 ntBASIC2.18□□□□□ -2.06
Rnf180Q3U827 Gm25797-201ENSMUST00000082640 107 ntBASIC2.18□□□□□ -2.06
Rnf180Q3U827 Gm23138-201ENSMUST00000083365 103 ntBASIC2.18□□□□□ -2.06
Rnf180Q3U827 Gm22681-201ENSMUST00000083853 106 ntBASIC2.18□□□□□ -2.06
Rnf180Q3U827 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Rnf180Q3U827 Gm11334-201ENSMUST00000121969 156 ntBASIC2.17□□□□□ -2.06
Rnf180Q3U827 Gm26280-201ENSMUST00000157096 101 ntBASIC2.17□□□□□ -2.06
Rnf180Q3U827 Gm26415-201ENSMUST00000157673 292 ntBASIC2.17□□□□□ -2.06
Rnf180Q3U827 Gm22387-201ENSMUST00000158191 131 ntBASIC2.17□□□□□ -2.06
Rnf180Q3U827 Gm18433-201ENSMUST00000192747 197 ntBASIC2.17□□□□□ -2.06
Rnf180Q3U827 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.17□□□□□ -2.06
Rnf180Q3U827 Mir490-201ENSMUST00000093567 84 ntBASIC2.17□□□□□ -2.06
Rnf180Q3U827 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.17□□□□□ -2.06
Rnf180Q3U827 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC2.16□□□□□ -2.06
Rnf180Q3U827 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Rnf180Q3U827 Gm24984-201ENSMUST00000104454 133 ntBASIC2.16□□□□□ -2.06
Rnf180Q3U827 Gm24586-201ENSMUST00000116695 89 ntBASIC2.16□□□□□ -2.06
Rnf180Q3U827 Gm11644-201ENSMUST00000119735 150 ntBASIC2.16□□□□□ -2.06
Rnf180Q3U827 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.16□□□□□ -2.06
Rnf180Q3U827 Gm23277-201ENSMUST00000157914 136 ntBASIC2.16□□□□□ -2.06
Rnf180Q3U827 AC139186.1-201ENSMUST00000197610 94 ntBASIC2.16□□□□□ -2.06
Rnf180Q3U827 Mir3069-201ENSMUST00000198802 65 ntBASIC2.16□□□□□ -2.06
Rnf180Q3U827 Mir7217-201ENSMUST00000200304 62 ntBASIC2.16□□□□□ -2.06
Rnf180Q3U827 Gm23445-201ENSMUST00000082800 107 ntBASIC2.16□□□□□ -2.06
Rnf180Q3U827 Gm22743-201ENSMUST00000083445 133 ntBASIC2.16□□□□□ -2.06
Rnf180Q3U827 Gm24449-201ENSMUST00000083985 106 ntBASIC2.16□□□□□ -2.06
Rnf180Q3U827 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Rnf180Q3U827 Gm14502-201ENSMUST00000118154 113 ntBASIC2.15□□□□□ -2.07
Rnf180Q3U827 Gm15115-201ENSMUST00000121145 264 ntBASIC2.15□□□□□ -2.07
Rnf180Q3U827 Gm25364-201ENSMUST00000158851 107 ntBASIC2.15□□□□□ -2.07
Rnf180Q3U827 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.15□□□□□ -2.07
Rnf180Q3U827 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.15□□□□□ -2.07
Rnf180Q3U827 Gm45544-201ENSMUST00000211130 88 ntBASIC2.15□□□□□ -2.07
Rnf180Q3U827 Gm24313-201ENSMUST00000082561 133 ntBASIC2.15□□□□□ -2.07
Rnf180Q3U827 Gm23303-201ENSMUST00000082714 152 ntBASIC2.15□□□□□ -2.07
Rnf180Q3U827 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Rnf180Q3U827 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Rnf180Q3U827 Gm22545-201ENSMUST00000104350 132 ntBASIC2.14□□□□□ -2.07
Rnf180Q3U827 Gm14626-201ENSMUST00000117619 216 ntBASIC2.14□□□□□ -2.07
Rnf180Q3U827 Gm14709-201ENSMUST00000121225 304 ntBASIC2.14□□□□□ -2.07
Rnf180Q3U827 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.14□□□□□ -2.07
Rnf180Q3U827 Gm24747-201ENSMUST00000157835 87 ntBASIC2.14□□□□□ -2.07
Rnf180Q3U827 Gm25771-201ENSMUST00000158565 144 ntBASIC2.14□□□□□ -2.07
Rnf180Q3U827 Gm24677-201ENSMUST00000158755 150 ntBASIC2.14□□□□□ -2.07
Rnf180Q3U827 Gm23504-201ENSMUST00000158988 95 ntBASIC2.14□□□□□ -2.07
Rnf180Q3U827 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.14□□□□□ -2.07
Rnf180Q3U827 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Rnf180Q3U827 Gm25279-201ENSMUST00000122608 133 ntBASIC2.13□□□□□ -2.07
Rnf180Q3U827 Gm16510-201ENSMUST00000153501 249 ntBASIC2.13□□□□□ -2.07
Rnf180Q3U827 Gm25060-201ENSMUST00000157374 130 ntBASIC2.13□□□□□ -2.07
Rnf180Q3U827 Mir3098-201ENSMUST00000175416 87 ntBASIC2.13□□□□□ -2.07
Rnf180Q3U827 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC2.13□□□□□ -2.07
Rnf180Q3U827 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.13□□□□□ -2.07
Rnf180Q3U827 Gm22283-201ENSMUST00000082556 161 ntBASIC2.13□□□□□ -2.07
Rnf180Q3U827 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.12□□□□□ -2.07
Rnf180Q3U827 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Rnf180Q3U827 Gm26011-201ENSMUST00000104410 104 ntBASIC2.12□□□□□ -2.07
Rnf180Q3U827 Gm23336-201ENSMUST00000117023 123 ntBASIC2.12□□□□□ -2.07
Rnf180Q3U827 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.12□□□□□ -2.07
Rnf180Q3U827 Gm23044-201ENSMUST00000157891 100 ntBASIC2.12□□□□□ -2.07
Rnf180Q3U827 Gm24345-201ENSMUST00000158706 124 ntBASIC2.12□□□□□ -2.07
Rnf180Q3U827 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.12□□□□□ -2.07
Rnf180Q3U827 Mir6419-201ENSMUST00000184784 113 ntBASIC2.12□□□□□ -2.07
Rnf180Q3U827 Gm29604-201ENSMUST00000187176 163 ntBASIC2.12□□□□□ -2.07
Rnf180Q3U827 Gm44240-201ENSMUST00000204015 2654 ntBASIC2.12□□□□□ -2.07
Rnf180Q3U827 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Rnf180Q3U827 Gm23172-201ENSMUST00000157160 124 ntBASIC2.11□□□□□ -2.07
Rnf180Q3U827 Gm22888-201ENSMUST00000158640 77 ntBASIC2.11□□□□□ -2.07
Rnf180Q3U827 Gm25730-201ENSMUST00000178753 165 ntBASIC2.11□□□□□ -2.07
Rnf180Q3U827 Gm43626-201ENSMUST00000198575 162 ntBASIC2.11□□□□□ -2.07
Rnf180Q3U827 Gm43898-201ENSMUST00000204456 424 ntBASIC2.11□□□□□ -2.07
Rnf180Q3U827 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Rnf180Q3U827 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC2.1□□□□□ -2.07
Rnf180Q3U827 Gm24000-201ENSMUST00000158063 89 ntBASIC2.1□□□□□ -2.07
Rnf180Q3U827 Gm23859-201ENSMUST00000158383 64 ntBASIC2.1□□□□□ -2.07
Rnf180Q3U827 Gm24656-201ENSMUST00000177548 132 ntBASIC2.1□□□□□ -2.07
Rnf180Q3U827 Mir7232-201ENSMUST00000197929 74 ntBASIC2.1□□□□□ -2.07
Rnf180Q3U827 Gm24616-201ENSMUST00000083274 139 ntBASIC2.1□□□□□ -2.07
Rnf180Q3U827 Mir19b-2-201ENSMUST00000083539 84 ntBASIC2.1□□□□□ -2.07
Rnf180Q3U827 Gm22828-201ENSMUST00000083768 107 ntBASIC2.1□□□□□ -2.07
Rnf180Q3U827 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Rnf180Q3U827 Gm26326-201ENSMUST00000083070 129 ntBASIC2.09□□□□□ -2.07
Rnf180Q3U827 Mir30d-201ENSMUST00000083503 82 ntBASIC2.09□□□□□ -2.07
Rnf180Q3U827 Gm26420-201ENSMUST00000104273 103 ntBASIC2.08□□□□□ -2.08
Rnf180Q3U827 Gm23708-201ENSMUST00000104367 123 ntBASIC2.08□□□□□ -2.08
Rnf180Q3U827 Gm25769-201ENSMUST00000158569 127 ntBASIC2.08□□□□□ -2.08
Rnf180Q3U827 Gm26073-201ENSMUST00000179906 127 ntBASIC2.08□□□□□ -2.08
Rnf180Q3U827 Gm27792-201ENSMUST00000184031 115 ntBASIC2.08□□□□□ -2.08
Rnf180Q3U827 Gm44462-201ENSMUST00000199696 129 ntBASIC2.08□□□□□ -2.08
Rnf180Q3U827 Gm25796-201ENSMUST00000082645 163 ntBASIC2.08□□□□□ -2.08
Rnf180Q3U827 Mir320-201ENSMUST00000083594 82 ntBASIC2.08□□□□□ -2.08
Rnf180Q3U827 Gm22576-201ENSMUST00000083733 104 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 309.4 ms