Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.07□□□□□ -1.92
Rnf40Q3U319 Gm14884-201ENSMUST00000120456 196 ntBASIC3.07□□□□□ -1.92
Rnf40Q3U319 Gm15654-201ENSMUST00000152660 300 ntBASIC3.07□□□□□ -1.92
Rnf40Q3U319 Gm23391-201ENSMUST00000157579 104 ntBASIC3.07□□□□□ -1.92
Rnf40Q3U319 Mir1934-201ENSMUST00000158127 83 ntBASIC3.07□□□□□ -1.92
Rnf40Q3U319 Gm25835-201ENSMUST00000158917 144 ntBASIC3.07□□□□□ -1.92
Rnf40Q3U319 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC3.07□□□□□ -1.92
Rnf40Q3U319 Gm28591-201ENSMUST00000185259 183 ntBASIC3.07□□□□□ -1.92
Rnf40Q3U319 Gm21007-201ENSMUST00000221024 326 ntBASIC3.07□□□□□ -1.92
Rnf40Q3U319 Mir5117-201ENSMUST00000083226 84 ntBASIC3.07□□□□□ -1.92
Rnf40Q3U319 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Rnf40Q3U319 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Rnf40Q3U319 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.06□□□□□ -1.92
Rnf40Q3U319 Gm24376-201ENSMUST00000104399 127 ntBASIC3.06□□□□□ -1.92
Rnf40Q3U319 Gm16328-201ENSMUST00000126985 196 ntBASIC3.06□□□□□ -1.92
Rnf40Q3U319 Gm22416-201ENSMUST00000158590 88 ntBASIC3.06□□□□□ -1.92
Rnf40Q3U319 Gm24880-201ENSMUST00000158776 85 ntBASIC3.06□□□□□ -1.92
Rnf40Q3U319 Gm25119-201ENSMUST00000158815 88 ntBASIC3.06□□□□□ -1.92
Rnf40Q3U319 Gm20672-201ENSMUST00000176605 261 ntBASIC3.06□□□□□ -1.92
Rnf40Q3U319 Mir7578-201ENSMUST00000183455 82 ntBASIC3.06□□□□□ -1.92
Rnf40Q3U319 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Rnf40Q3U319 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Rnf40Q3U319 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Rnf40Q3U319 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.06□□□□□ -1.92
Rnf40Q3U319 Gm43484-201ENSMUST00000198333 5966 ntBASIC3.05□□□□□ -1.92
Rnf40Q3U319 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.05□□□□□ -1.92
Rnf40Q3U319 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
Rnf40Q3U319 Gm11966-201ENSMUST00000119907 87 ntBASIC3.05□□□□□ -1.92
Rnf40Q3U319 Gm22815-201ENSMUST00000157451 62 ntBASIC3.05□□□□□ -1.92
Rnf40Q3U319 Gm25066-201ENSMUST00000158145 123 ntBASIC3.05□□□□□ -1.92
Rnf40Q3U319 Mir6369-201ENSMUST00000183772 106 ntBASIC3.05□□□□□ -1.92
Rnf40Q3U319 Gm25798-201ENSMUST00000082641 107 ntBASIC3.05□□□□□ -1.92
Rnf40Q3U319 Gm24533-201ENSMUST00000083138 196 ntBASIC3.05□□□□□ -1.92
Rnf40Q3U319 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Rnf40Q3U319 Gm18795-202ENSMUST00000223373 2920 ntBASIC3.05□□□□□ -1.92
Rnf40Q3U319 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC3.05□□□□□ -1.92
Rnf40Q3U319 Gm44133-202ENSMUST00000204450 2586 ntBASIC3.05□□□□□ -1.92
Rnf40Q3U319 Gm23609-201ENSMUST00000104542 127 ntBASIC3.04□□□□□ -1.92
Rnf40Q3U319 Gm26213-201ENSMUST00000158582 110 ntBASIC3.04□□□□□ -1.92
Rnf40Q3U319 Gm20391-201ENSMUST00000174722 106 ntBASIC3.04□□□□□ -1.92
Rnf40Q3U319 Gm23375-201ENSMUST00000175407 83 ntBASIC3.04□□□□□ -1.92
Rnf40Q3U319 Gm19257-201ENSMUST00000186121 183 ntBASIC3.04□□□□□ -1.92
Rnf40Q3U319 Gm6109-201ENSMUST00000223297 348 ntBASIC3.04□□□□□ -1.92
Rnf40Q3U319 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Rnf40Q3U319 Gm22590-201ENSMUST00000104247 128 ntBASIC3.03□□□□□ -1.92
Rnf40Q3U319 Gm23530-201ENSMUST00000104564 137 ntBASIC3.03□□□□□ -1.92
Rnf40Q3U319 Fau-ps1-201ENSMUST00000119675 252 ntBASIC3.03□□□□□ -1.92
Rnf40Q3U319 Gm24384-201ENSMUST00000122693 75 ntBASIC3.03□□□□□ -1.92
Rnf40Q3U319 Gm24399-201ENSMUST00000157869 74 ntBASIC3.03□□□□□ -1.92
Rnf40Q3U319 Gm25160-201ENSMUST00000158914 102 ntBASIC3.03□□□□□ -1.92
Rnf40Q3U319 Mir5123-201ENSMUST00000177794 83 ntBASIC3.03□□□□□ -1.92
Rnf40Q3U319 Gm7258-201ENSMUST00000179317 300 ntBASIC3.03□□□□□ -1.92
Rnf40Q3U319 Gm27700-201ENSMUST00000185003 81 ntBASIC3.03□□□□□ -1.92
Rnf40Q3U319 Gm28358-202ENSMUST00000189292 223 ntBASIC3.03□□□□□ -1.92
Rnf40Q3U319 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Rnf40Q3U319 Mir499-201ENSMUST00000102357 79 ntBASIC3.02□□□□□ -1.93
Rnf40Q3U319 Gm25270-201ENSMUST00000122606 138 ntBASIC3.02□□□□□ -1.93
Rnf40Q3U319 Mir6388-201ENSMUST00000184417 75 ntBASIC3.02□□□□□ -1.93
Rnf40Q3U319 Gm43521-201ENSMUST00000197838 255 ntBASIC3.02□□□□□ -1.93
Rnf40Q3U319 Gm43107-201ENSMUST00000198729 255 ntBASIC3.02□□□□□ -1.93
Rnf40Q3U319 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
Rnf40Q3U319 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
Rnf40Q3U319 Gm22023-201ENSMUST00000104354 130 ntBASIC3.01□□□□□ -1.93
Rnf40Q3U319 Gm26341-201ENSMUST00000104561 134 ntBASIC3.01□□□□□ -1.93
Rnf40Q3U319 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.01□□□□□ -1.93
Rnf40Q3U319 Gm24333-201ENSMUST00000175101 84 ntBASIC3.01□□□□□ -1.93
Rnf40Q3U319 Gm5900-201ENSMUST00000179862 375 ntBASIC3.01□□□□□ -1.93
Rnf40Q3U319 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Rnf40Q3U319 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Rnf40Q3U319 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Rnf40Q3U319 Gm24396-201ENSMUST00000116905 93 ntBASIC3□□□□□ -1.93
Rnf40Q3U319 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3□□□□□ -1.93
Rnf40Q3U319 Gm16550-201ENSMUST00000162550 126 ntBASIC3□□□□□ -1.93
Rnf40Q3U319 Gm27893-201ENSMUST00000184408 194 ntBASIC3□□□□□ -1.93
Rnf40Q3U319 Gm34314-201ENSMUST00000203622 367 ntBASIC3□□□□□ -1.93
Rnf40Q3U319 Mir429-201ENSMUST00000083493 83 ntBASIC3□□□□□ -1.93
Rnf40Q3U319 Mir128-1-201ENSMUST00000083586 70 ntBASIC3□□□□□ -1.93
Rnf40Q3U319 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Rnf40Q3U319 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Rnf40Q3U319 Gm24049-201ENSMUST00000102409 100 ntBASIC2.99□□□□□ -1.93
Rnf40Q3U319 Mir6386-201ENSMUST00000183558 104 ntBASIC2.99□□□□□ -1.93
Rnf40Q3U319 Gm44903-201ENSMUST00000206840 130 ntBASIC2.99□□□□□ -1.93
Rnf40Q3U319 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.99□□□□□ -1.93
Rnf40Q3U319 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC2.99□□□□□ -1.93
Rnf40Q3U319 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Rnf40Q3U319 Gm26100-201ENSMUST00000157245 127 ntBASIC2.98□□□□□ -1.93
Rnf40Q3U319 Gm22554-201ENSMUST00000157798 147 ntBASIC2.98□□□□□ -1.93
Rnf40Q3U319 Gm24851-201ENSMUST00000158028 103 ntBASIC2.98□□□□□ -1.93
Rnf40Q3U319 Gm25519-201ENSMUST00000158392 127 ntBASIC2.98□□□□□ -1.93
Rnf40Q3U319 Gm25044-201ENSMUST00000158603 104 ntBASIC2.98□□□□□ -1.93
Rnf40Q3U319 Gm16539-201ENSMUST00000160086 327 ntBASIC2.98□□□□□ -1.93
Rnf40Q3U319 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.98□□□□□ -1.93
Rnf40Q3U319 Snord53-201ENSMUST00000175146 78 ntBASIC2.98□□□□□ -1.93
Rnf40Q3U319 Gm25750-201ENSMUST00000175483 112 ntBASIC2.98□□□□□ -1.93
Rnf40Q3U319 Gm44462-201ENSMUST00000199696 129 ntBASIC2.98□□□□□ -1.93
Rnf40Q3U319 Gm26062-201ENSMUST00000083379 107 ntBASIC2.98□□□□□ -1.93
Rnf40Q3U319 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Rnf40Q3U319 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Rnf40Q3U319 Mir20b-201ENSMUST00000102087 80 ntBASIC2.97□□□□□ -1.93
Rnf40Q3U319 Gm26290-201ENSMUST00000158891 145 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms