Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.8□□□□□ -2.12
Col28a1Q2UY11 Mir410-201ENSMUST00000083563 81 ntBASIC1.8□□□□□ -2.12
Col28a1Q2UY11 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
Col28a1Q2UY11 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.79□□□□□ -2.12
Col28a1Q2UY11 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Col28a1Q2UY11 Gm14946-201ENSMUST00000119859 296 ntBASIC1.79□□□□□ -2.12
Col28a1Q2UY11 Gm25371-201ENSMUST00000158162 101 ntBASIC1.79□□□□□ -2.12
Col28a1Q2UY11 Gm26864-201ENSMUST00000181346 156 ntBASIC1.79□□□□□ -2.12
Col28a1Q2UY11 Mir8116-201ENSMUST00000184134 97 ntBASIC1.79□□□□□ -2.12
Col28a1Q2UY11 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.79□□□□□ -2.12
Col28a1Q2UY11 AC160962.3-201ENSMUST00000225914 112 ntBASIC1.79□□□□□ -2.12
Col28a1Q2UY11 Snord118-201ENSMUST00000082965 135 ntBASIC1.79□□□□□ -2.12
Col28a1Q2UY11 Gm24536-201ENSMUST00000083144 107 ntBASIC1.79□□□□□ -2.12
Col28a1Q2UY11 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.79□□□□□ -2.12
Col28a1Q2UY11 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
Col28a1Q2UY11 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.78□□□□□ -2.12
Col28a1Q2UY11 Gm16328-201ENSMUST00000126985 196 ntBASIC1.78□□□□□ -2.12
Col28a1Q2UY11 Gm22279-201ENSMUST00000157200 93 ntBASIC1.78□□□□□ -2.12
Col28a1Q2UY11 Gm22731-201ENSMUST00000158086 94 ntBASIC1.78□□□□□ -2.12
Col28a1Q2UY11 Gm25368-201ENSMUST00000158847 131 ntBASIC1.78□□□□□ -2.12
Col28a1Q2UY11 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Col28a1Q2UY11 Gm9156-201ENSMUST00000189660 463 ntBASIC1.78□□□□□ -2.12
Col28a1Q2UY11 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Col28a1Q2UY11 Gm3724-201ENSMUST00000197957 349 ntBASIC1.78□□□□□ -2.12
Col28a1Q2UY11 Gm42807-201ENSMUST00000200141 329 ntBASIC1.78□□□□□ -2.12
Col28a1Q2UY11 Gm45386-201ENSMUST00000210194 218 ntBASIC1.78□□□□□ -2.12
Col28a1Q2UY11 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.78□□□□□ -2.12
Col28a1Q2UY11 Gm26922-201ENSMUST00000082687 72 ntBASIC1.78□□□□□ -2.12
Col28a1Q2UY11 Mir29c-201ENSMUST00000083614 88 ntBASIC1.78□□□□□ -2.12
Col28a1Q2UY11 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Col28a1Q2UY11 Gm24907-201ENSMUST00000116932 128 ntBASIC1.77□□□□□ -2.13
Col28a1Q2UY11 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Col28a1Q2UY11 Gm22079-201ENSMUST00000157592 106 ntBASIC1.77□□□□□ -2.13
Col28a1Q2UY11 Gm22556-201ENSMUST00000157803 100 ntBASIC1.77□□□□□ -2.13
Col28a1Q2UY11 Gm25558-201ENSMUST00000158083 106 ntBASIC1.77□□□□□ -2.13
Col28a1Q2UY11 Gm25771-201ENSMUST00000158565 144 ntBASIC1.77□□□□□ -2.13
Col28a1Q2UY11 Mir6901-201ENSMUST00000185062 62 ntBASIC1.77□□□□□ -2.13
Col28a1Q2UY11 Gm25627-201ENSMUST00000084003 153 ntBASIC1.77□□□□□ -2.13
Col28a1Q2UY11 BC022960-201ENSMUST00000119987 1815 ntBASIC1.77□□□□□ -2.13
Col28a1Q2UY11 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Col28a1Q2UY11 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Col28a1Q2UY11 Gm25091-201ENSMUST00000103997 71 ntBASIC1.76□□□□□ -2.13
Col28a1Q2UY11 Gm27878-201ENSMUST00000184000 106 ntBASIC1.76□□□□□ -2.13
Col28a1Q2UY11 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.76□□□□□ -2.13
Col28a1Q2UY11 Gm24165-201ENSMUST00000082718 128 ntBASIC1.76□□□□□ -2.13
Col28a1Q2UY11 Gm22683-201ENSMUST00000082854 137 ntBASIC1.76□□□□□ -2.13
Col28a1Q2UY11 Mir547-201ENSMUST00000102051 78 ntBASIC1.75□□□□□ -2.13
Col28a1Q2UY11 Gm25878-201ENSMUST00000104327 93 ntBASIC1.75□□□□□ -2.13
Col28a1Q2UY11 Gm12013-201ENSMUST00000121971 155 ntBASIC1.75□□□□□ -2.13
Col28a1Q2UY11 Gm22796-201ENSMUST00000157234 106 ntBASIC1.75□□□□□ -2.13
Col28a1Q2UY11 Gm22429-201ENSMUST00000158553 130 ntBASIC1.75□□□□□ -2.13
Col28a1Q2UY11 Gm25678-201ENSMUST00000174984 73 ntBASIC1.75□□□□□ -2.13
Col28a1Q2UY11 Gm24638-201ENSMUST00000179807 132 ntBASIC1.75□□□□□ -2.13
Col28a1Q2UY11 Gm37330-201ENSMUST00000192606 153 ntBASIC1.75□□□□□ -2.13
Col28a1Q2UY11 Mir7215-201ENSMUST00000200383 51 ntBASIC1.75□□□□□ -2.13
Col28a1Q2UY11 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.75□□□□□ -2.13
Col28a1Q2UY11 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.75□□□□□ -2.13
Col28a1Q2UY11 Gm26420-201ENSMUST00000104273 103 ntBASIC1.74□□□□□ -2.13
Col28a1Q2UY11 Gm22535-201ENSMUST00000158174 119 ntBASIC1.74□□□□□ -2.13
Col28a1Q2UY11 Gm25769-201ENSMUST00000158569 127 ntBASIC1.74□□□□□ -2.13
Col28a1Q2UY11 Mir1931-201ENSMUST00000158589 119 ntBASIC1.74□□□□□ -2.13
Col28a1Q2UY11 Gm25996-201ENSMUST00000175393 117 ntBASIC1.74□□□□□ -2.13
Col28a1Q2UY11 Gm24572-201ENSMUST00000175505 88 ntBASIC1.74□□□□□ -2.13
Col28a1Q2UY11 Gm8034-201ENSMUST00000178853 132 ntBASIC1.74□□□□□ -2.13
Col28a1Q2UY11 Mir6352-201ENSMUST00000184495 116 ntBASIC1.74□□□□□ -2.13
Col28a1Q2UY11 Gm6109-201ENSMUST00000223297 348 ntBASIC1.74□□□□□ -2.13
Col28a1Q2UY11 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.74□□□□□ -2.13
Col28a1Q2UY11 Gm26326-201ENSMUST00000083070 129 ntBASIC1.74□□□□□ -2.13
Col28a1Q2UY11 Mir34a-201ENSMUST00000083559 102 ntBASIC1.74□□□□□ -2.13
Col28a1Q2UY11 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.74□□□□□ -2.13
Col28a1Q2UY11 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.73□□□□□ -2.13
Col28a1Q2UY11 Gm14937-201ENSMUST00000119709 208 ntBASIC1.73□□□□□ -2.13
Col28a1Q2UY11 Gm14671-201ENSMUST00000121790 262 ntBASIC1.73□□□□□ -2.13
Col28a1Q2UY11 Gm25544-201ENSMUST00000122676 120 ntBASIC1.73□□□□□ -2.13
Col28a1Q2UY11 Gm15692-201ENSMUST00000152173 352 ntBASIC1.73□□□□□ -2.13
Col28a1Q2UY11 Gm25884-201ENSMUST00000157782 62 ntBASIC1.73□□□□□ -2.13
Col28a1Q2UY11 Gm22387-201ENSMUST00000158191 131 ntBASIC1.73□□□□□ -2.13
Col28a1Q2UY11 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.73□□□□□ -2.13
Col28a1Q2UY11 Gm44932-201ENSMUST00000206799 121 ntBASIC1.73□□□□□ -2.13
Col28a1Q2UY11 Gm24038-201ENSMUST00000082872 159 ntBASIC1.73□□□□□ -2.13
Col28a1Q2UY11 Mir301b-201ENSMUST00000102333 97 ntBASIC1.72□□□□□ -2.13
Col28a1Q2UY11 Gm22196-201ENSMUST00000116865 109 ntBASIC1.72□□□□□ -2.13
Col28a1Q2UY11 Gm22031-201ENSMUST00000116945 126 ntBASIC1.72□□□□□ -2.13
Col28a1Q2UY11 Gm22451-201ENSMUST00000122803 151 ntBASIC1.72□□□□□ -2.13
Col28a1Q2UY11 Gm23898-201ENSMUST00000158111 103 ntBASIC1.72□□□□□ -2.13
Col28a1Q2UY11 Gm22386-201ENSMUST00000158192 129 ntBASIC1.72□□□□□ -2.13
Col28a1Q2UY11 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Col28a1Q2UY11 Gm43865-201ENSMUST00000204721 127 ntBASIC1.72□□□□□ -2.13
Col28a1Q2UY11 Gm23244-201ENSMUST00000083375 92 ntBASIC1.72□□□□□ -2.13
Col28a1Q2UY11 Mir301-201ENSMUST00000083655 86 ntBASIC1.72□□□□□ -2.13
Col28a1Q2UY11 Snora33-201ENSMUST00000093556 129 ntBASIC1.72□□□□□ -2.13
Col28a1Q2UY11 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Gm25022-201ENSMUST00000102205 83 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Gm23390-201ENSMUST00000157393 106 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Gm26415-201ENSMUST00000157673 292 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Gm22338-201ENSMUST00000157715 129 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Gm24076-201ENSMUST00000158179 94 ntBASIC1.71□□□□□ -2.14
Col28a1Q2UY11 Mir467a-6-201ENSMUST00000177790 83 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 135.5 ms