Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm22281-201ENSMUST00000157198 103 ntBASIC2.9□□□□□ -1.95
Col17a1Q07563 Gm23601-201ENSMUST00000157259 131 ntBASIC2.9□□□□□ -1.95
Col17a1Q07563 Gm23535-201ENSMUST00000157542 106 ntBASIC2.9□□□□□ -1.95
Col17a1Q07563 Gm22516-201ENSMUST00000158266 124 ntBASIC2.9□□□□□ -1.95
Col17a1Q07563 Gm25491-201ENSMUST00000158733 308 ntBASIC2.9□□□□□ -1.95
Col17a1Q07563 Mir3098-201ENSMUST00000175416 87 ntBASIC2.9□□□□□ -1.95
Col17a1Q07563 Gm27698-201ENSMUST00000184060 249 ntBASIC2.9□□□□□ -1.95
Col17a1Q07563 AC126939.1-201ENSMUST00000224943 226 ntBASIC2.9□□□□□ -1.95
Col17a1Q07563 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.9□□□□□ -1.95
Col17a1Q07563 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.9□□□□□ -1.95
Col17a1Q07563 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Col17a1Q07563 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.89□□□□□ -1.95
Col17a1Q07563 Gm24582-201ENSMUST00000103967 103 ntBASIC2.89□□□□□ -1.95
Col17a1Q07563 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Col17a1Q07563 Mir1936-201ENSMUST00000158699 93 ntBASIC2.89□□□□□ -1.95
Col17a1Q07563 Gm23194-201ENSMUST00000158813 105 ntBASIC2.89□□□□□ -1.95
Col17a1Q07563 Gm44326-201ENSMUST00000198226 101 ntBASIC2.89□□□□□ -1.95
Col17a1Q07563 Gm11351-202ENSMUST00000225724 478 ntBASIC2.89□□□□□ -1.95
Col17a1Q07563 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Col17a1Q07563 Gm23349-201ENSMUST00000158432 98 ntBASIC2.88□□□□□ -1.95
Col17a1Q07563 Gm25978-201ENSMUST00000158698 90 ntBASIC2.88□□□□□ -1.95
Col17a1Q07563 Gm26498-201ENSMUST00000177799 79 ntBASIC2.88□□□□□ -1.95
Col17a1Q07563 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.88□□□□□ -1.95
Col17a1Q07563 Gm26230-201ENSMUST00000180141 79 ntBASIC2.88□□□□□ -1.95
Col17a1Q07563 Gm28912-201ENSMUST00000189001 234 ntBASIC2.88□□□□□ -1.95
Col17a1Q07563 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.88□□□□□ -1.95
Col17a1Q07563 Mir208a-201ENSMUST00000083498 83 ntBASIC2.88□□□□□ -1.95
Col17a1Q07563 Snora69-201ENSMUST00000083708 131 ntBASIC2.88□□□□□ -1.95
Col17a1Q07563 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.87□□□□□ -1.95
Col17a1Q07563 Gm14567-201ENSMUST00000117155 174 ntBASIC2.87□□□□□ -1.95
Col17a1Q07563 Gm24595-201ENSMUST00000122501 110 ntBASIC2.87□□□□□ -1.95
Col17a1Q07563 Gm22957-201ENSMUST00000122511 123 ntBASIC2.87□□□□□ -1.95
Col17a1Q07563 Gm22382-201ENSMUST00000158185 130 ntBASIC2.87□□□□□ -1.95
Col17a1Q07563 Mir6371-201ENSMUST00000184470 111 ntBASIC2.87□□□□□ -1.95
Col17a1Q07563 Gm6801-201ENSMUST00000190697 339 ntBASIC2.87□□□□□ -1.95
Col17a1Q07563 Gm24661-201ENSMUST00000083205 104 ntBASIC2.87□□□□□ -1.95
Col17a1Q07563 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.86□□□□□ -1.95
Col17a1Q07563 Gm23336-201ENSMUST00000117023 123 ntBASIC2.86□□□□□ -1.95
Col17a1Q07563 Gm25323-201ENSMUST00000122555 103 ntBASIC2.86□□□□□ -1.95
Col17a1Q07563 Gm25828-201ENSMUST00000157087 95 ntBASIC2.86□□□□□ -1.95
Col17a1Q07563 Gm22079-201ENSMUST00000157592 106 ntBASIC2.86□□□□□ -1.95
Col17a1Q07563 Gm27396-201ENSMUST00000157708 58 ntBASIC2.86□□□□□ -1.95
Col17a1Q07563 Gm23859-201ENSMUST00000158383 64 ntBASIC2.86□□□□□ -1.95
Col17a1Q07563 Gm24572-201ENSMUST00000175505 88 ntBASIC2.86□□□□□ -1.95
Col17a1Q07563 Gm27921-201ENSMUST00000183968 108 ntBASIC2.86□□□□□ -1.95
Col17a1Q07563 Gm26493-201ENSMUST00000083155 136 ntBASIC2.86□□□□□ -1.95
Col17a1Q07563 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Col17a1Q07563 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Col17a1Q07563 Gm23015-201ENSMUST00000104145 128 ntBASIC2.85□□□□□ -1.95
Col17a1Q07563 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.85□□□□□ -1.95
Col17a1Q07563 Gm15115-201ENSMUST00000121145 264 ntBASIC2.85□□□□□ -1.95
Col17a1Q07563 Gm22770-201ENSMUST00000158368 67 ntBASIC2.85□□□□□ -1.95
Col17a1Q07563 Gm24277-201ENSMUST00000158661 104 ntBASIC2.85□□□□□ -1.95
Col17a1Q07563 Mir7232-201ENSMUST00000197929 74 ntBASIC2.85□□□□□ -1.95
Col17a1Q07563 Gm42739-201ENSMUST00000200687 226 ntBASIC2.85□□□□□ -1.95
Col17a1Q07563 AC122327.1-201ENSMUST00000220778 108 ntBASIC2.85□□□□□ -1.95
Col17a1Q07563 Gm23850-201ENSMUST00000083830 169 ntBASIC2.85□□□□□ -1.95
Col17a1Q07563 Gm22545-201ENSMUST00000104350 132 ntBASIC2.84□□□□□ -1.95
Col17a1Q07563 Gm23053-201ENSMUST00000175136 96 ntBASIC2.84□□□□□ -1.95
Col17a1Q07563 Mir6370-201ENSMUST00000183510 120 ntBASIC2.84□□□□□ -1.95
Col17a1Q07563 Mir7021-201ENSMUST00000197026 63 ntBASIC2.84□□□□□ -1.95
Col17a1Q07563 Gm25588-201ENSMUST00000082501 140 ntBASIC2.84□□□□□ -1.95
Col17a1Q07563 Gm23056-201ENSMUST00000082803 111 ntBASIC2.84□□□□□ -1.95
Col17a1Q07563 Gm23507-201ENSMUST00000083078 107 ntBASIC2.84□□□□□ -1.95
Col17a1Q07563 Mir196b-201ENSMUST00000083509 85 ntBASIC2.84□□□□□ -1.95
Col17a1Q07563 Mir320-201ENSMUST00000083594 82 ntBASIC2.84□□□□□ -1.95
Col17a1Q07563 Snord11-201ENSMUST00000158468 84 ntBASIC2.84□□□□□ -1.96
Col17a1Q07563 Gm27415-201ENSMUST00000183720 95 ntBASIC2.84□□□□□ -1.96
Col17a1Q07563 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.84□□□□□ -1.96
Col17a1Q07563 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.84□□□□□ -1.96
Col17a1Q07563 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
Col17a1Q07563 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
Col17a1Q07563 Gm23202-201ENSMUST00000104376 129 ntBASIC2.83□□□□□ -1.96
Col17a1Q07563 Gm25728-201ENSMUST00000104525 159 ntBASIC2.83□□□□□ -1.96
Col17a1Q07563 Gm15365-201ENSMUST00000122392 300 ntBASIC2.83□□□□□ -1.96
Col17a1Q07563 Gm25107-201ENSMUST00000122472 129 ntBASIC2.83□□□□□ -1.96
Col17a1Q07563 Mir28b-201ENSMUST00000175399 80 ntBASIC2.83□□□□□ -1.96
Col17a1Q07563 Gm24388-201ENSMUST00000177872 107 ntBASIC2.83□□□□□ -1.96
Col17a1Q07563 Gm23567-201ENSMUST00000178005 107 ntBASIC2.83□□□□□ -1.96
Col17a1Q07563 Gm28169-201ENSMUST00000190342 345 ntBASIC2.83□□□□□ -1.96
Col17a1Q07563 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.83□□□□□ -1.96
Col17a1Q07563 Gm22443-201ENSMUST00000082890 107 ntBASIC2.83□□□□□ -1.96
Col17a1Q07563 Gm25705-201ENSMUST00000083119 104 ntBASIC2.83□□□□□ -1.96
Col17a1Q07563 Mir423-201ENSMUST00000083584 109 ntBASIC2.83□□□□□ -1.96
Col17a1Q07563 Gm22638-201ENSMUST00000179674 107 ntBASIC2.82□□□□□ -1.96
Col17a1Q07563 Gm37778-201ENSMUST00000191732 190 ntBASIC2.82□□□□□ -1.96
Col17a1Q07563 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.82□□□□□ -1.96
Col17a1Q07563 Gm44057-201ENSMUST00000204547 96 ntBASIC2.82□□□□□ -1.96
Col17a1Q07563 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.82□□□□□ -1.96
Col17a1Q07563 Gm22507-201ENSMUST00000082773 160 ntBASIC2.82□□□□□ -1.96
Col17a1Q07563 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Col17a1Q07563 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
Col17a1Q07563 Gm14946-201ENSMUST00000119859 296 ntBASIC2.81□□□□□ -1.96
Col17a1Q07563 Mir1927-201ENSMUST00000158579 109 ntBASIC2.81□□□□□ -1.96
Col17a1Q07563 Gm24837-201ENSMUST00000158683 81 ntBASIC2.81□□□□□ -1.96
Col17a1Q07563 Mir3068-202ENSMUST00000197755 79 ntBASIC2.81□□□□□ -1.96
Col17a1Q07563 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.81□□□□□ -1.96
Col17a1Q07563 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.81□□□□□ -1.96
Col17a1Q07563 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col17a1Q07563 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 167.4 ms