Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm22943-201ENSMUST00000158564 76 ntBASIC2.63□□□□□ -1.99
Col6a1Q04857 Gm22069-201ENSMUST00000179911 107 ntBASIC2.63□□□□□ -1.99
Col6a1Q04857 Gm45544-201ENSMUST00000211130 88 ntBASIC2.63□□□□□ -1.99
Col6a1Q04857 Gm25681-201ENSMUST00000083938 106 ntBASIC2.63□□□□□ -1.99
Col6a1Q04857 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.63□□□□□ -1.99
Col6a1Q04857 Gm23600-201ENSMUST00000157260 71 ntBASIC2.62□□□□□ -1.99
Col6a1Q04857 Gm24250-201ENSMUST00000157320 135 ntBASIC2.62□□□□□ -1.99
Col6a1Q04857 Gm23898-201ENSMUST00000158111 103 ntBASIC2.62□□□□□ -1.99
Col6a1Q04857 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.62□□□□□ -1.99
Col6a1Q04857 Gm23289-201ENSMUST00000175615 108 ntBASIC2.62□□□□□ -1.99
Col6a1Q04857 Gm23770-201ENSMUST00000178009 108 ntBASIC2.62□□□□□ -1.99
Col6a1Q04857 Gm22832-201ENSMUST00000178022 108 ntBASIC2.62□□□□□ -1.99
Col6a1Q04857 Gm23863-201ENSMUST00000178265 108 ntBASIC2.62□□□□□ -1.99
Col6a1Q04857 Gm24828-201ENSMUST00000178507 108 ntBASIC2.62□□□□□ -1.99
Col6a1Q04857 Gm23052-201ENSMUST00000178633 108 ntBASIC2.62□□□□□ -1.99
Col6a1Q04857 Gm25729-201ENSMUST00000179050 108 ntBASIC2.62□□□□□ -1.99
Col6a1Q04857 Gm25359-201ENSMUST00000179315 108 ntBASIC2.62□□□□□ -1.99
Col6a1Q04857 Gm26466-201ENSMUST00000179615 79 ntBASIC2.62□□□□□ -1.99
Col6a1Q04857 Gm22624-201ENSMUST00000179913 108 ntBASIC2.62□□□□□ -1.99
Col6a1Q04857 Gm27898-201ENSMUST00000183987 80 ntBASIC2.62□□□□□ -1.99
Col6a1Q04857 Mir6928-201ENSMUST00000185166 70 ntBASIC2.62□□□□□ -1.99
Col6a1Q04857 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.62□□□□□ -1.99
Col6a1Q04857 Mir301-201ENSMUST00000083655 86 ntBASIC2.62□□□□□ -1.99
Col6a1Q04857 Gm25628-201ENSMUST00000084002 105 ntBASIC2.62□□□□□ -1.99
Col6a1Q04857 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Col6a1Q04857 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Col6a1Q04857 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.61□□□□□ -1.99
Col6a1Q04857 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.61□□□□□ -1.99
Col6a1Q04857 Gm22228-201ENSMUST00000157364 101 ntBASIC2.61□□□□□ -1.99
Col6a1Q04857 Gm26345-201ENSMUST00000157534 120 ntBASIC2.61□□□□□ -1.99
Col6a1Q04857 Gm24771-201ENSMUST00000158508 137 ntBASIC2.61□□□□□ -1.99
Col6a1Q04857 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC2.61□□□□□ -1.99
Col6a1Q04857 Gm27991-201ENSMUST00000184804 137 ntBASIC2.61□□□□□ -1.99
Col6a1Q04857 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC2.61□□□□□ -1.99
Col6a1Q04857 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.61□□□□□ -1.99
Col6a1Q04857 Gm24099-201ENSMUST00000083384 107 ntBASIC2.61□□□□□ -1.99
Col6a1Q04857 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
Col6a1Q04857 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col6a1Q04857 Gm26253-201ENSMUST00000122493 103 ntBASIC2.6□□□□□ -1.99
Col6a1Q04857 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.6□□□□□ -1.99
Col6a1Q04857 Gm23980-201ENSMUST00000157135 158 ntBASIC2.6□□□□□ -1.99
Col6a1Q04857 Gm23223-201ENSMUST00000158119 127 ntBASIC2.6□□□□□ -1.99
Col6a1Q04857 Gm22517-201ENSMUST00000158265 136 ntBASIC2.6□□□□□ -1.99
Col6a1Q04857 Gm23005-201ENSMUST00000158950 136 ntBASIC2.6□□□□□ -1.99
Col6a1Q04857 Gm43626-201ENSMUST00000198575 162 ntBASIC2.6□□□□□ -1.99
Col6a1Q04857 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.6□□□□□ -1.99
Col6a1Q04857 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col6a1Q04857 Gm6444-201ENSMUST00000119611 458 ntBASIC2.59□□□□□ -1.99
Col6a1Q04857 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.59□□□□□ -1.99
Col6a1Q04857 Gm24238-201ENSMUST00000157792 98 ntBASIC2.59□□□□□ -1.99
Col6a1Q04857 Gm24044-201ENSMUST00000083107 156 ntBASIC2.59□□□□□ -1.99
Col6a1Q04857 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Col6a1Q04857 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.59□□□□□ -2
Col6a1Q04857 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.58□□□□□ -2
Col6a1Q04857 Mir758-201ENSMUST00000103260 81 ntBASIC2.58□□□□□ -2
Col6a1Q04857 Gm12309-201ENSMUST00000119889 182 ntBASIC2.58□□□□□ -2
Col6a1Q04857 Gm22999-201ENSMUST00000157082 88 ntBASIC2.58□□□□□ -2
Col6a1Q04857 Gm22338-201ENSMUST00000157715 129 ntBASIC2.58□□□□□ -2
Col6a1Q04857 Gm23083-201ENSMUST00000157851 116 ntBASIC2.58□□□□□ -2
Col6a1Q04857 Gm22729-201ENSMUST00000158088 129 ntBASIC2.58□□□□□ -2
Col6a1Q04857 Gm23854-201ENSMUST00000158378 108 ntBASIC2.58□□□□□ -2
Col6a1Q04857 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col6a1Q04857 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col6a1Q04857 Gm22283-201ENSMUST00000082556 161 ntBASIC2.58□□□□□ -2
Col6a1Q04857 Gm25697-201ENSMUST00000082902 98 ntBASIC2.58□□□□□ -2
Col6a1Q04857 Mir222-201ENSMUST00000083537 79 ntBASIC2.58□□□□□ -2
Col6a1Q04857 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Col6a1Q04857 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.58□□□□□ -2
Col6a1Q04857 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.57□□□□□ -2
Col6a1Q04857 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Col6a1Q04857 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Col6a1Q04857 Gm26154-201ENSMUST00000102339 96 ntBASIC2.57□□□□□ -2
Col6a1Q04857 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.57□□□□□ -2
Col6a1Q04857 Gm25045-201ENSMUST00000122670 99 ntBASIC2.57□□□□□ -2
Col6a1Q04857 Gm22554-201ENSMUST00000157798 147 ntBASIC2.57□□□□□ -2
Col6a1Q04857 Gm24212-201ENSMUST00000158258 132 ntBASIC2.57□□□□□ -2
Col6a1Q04857 Gm44408-201ENSMUST00000200205 66 ntBASIC2.57□□□□□ -2
Col6a1Q04857 Gm19855-201ENSMUST00000210145 249 ntBASIC2.57□□□□□ -2
Col6a1Q04857 Gm7214-201ENSMUST00000222428 272 ntBASIC2.57□□□□□ -2
Col6a1Q04857 Gm24261-201ENSMUST00000083744 104 ntBASIC2.57□□□□□ -2
Col6a1Q04857 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Col6a1Q04857 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.57□□□□□ -2
Col6a1Q04857 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Col6a1Q04857 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.56□□□□□ -2
Col6a1Q04857 Gm24000-201ENSMUST00000158063 89 ntBASIC2.56□□□□□ -2
Col6a1Q04857 Gm22768-201ENSMUST00000158366 153 ntBASIC2.56□□□□□ -2
Col6a1Q04857 Gm20409-201ENSMUST00000173457 130 ntBASIC2.56□□□□□ -2
Col6a1Q04857 Gm44325-201ENSMUST00000196757 77 ntBASIC2.56□□□□□ -2
Col6a1Q04857 Mir3087-201ENSMUST00000199405 56 ntBASIC2.56□□□□□ -2
Col6a1Q04857 Gm45654-201ENSMUST00000210980 123 ntBASIC2.56□□□□□ -2
Col6a1Q04857 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col6a1Q04857 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
Col6a1Q04857 Gm14674-201ENSMUST00000117816 342 ntBASIC2.55□□□□□ -2
Col6a1Q04857 Gm25887-201ENSMUST00000157777 84 ntBASIC2.55□□□□□ -2
Col6a1Q04857 Gm24947-201ENSMUST00000158334 110 ntBASIC2.55□□□□□ -2
Col6a1Q04857 Gm42960-201ENSMUST00000202160 241 ntBASIC2.55□□□□□ -2
Col6a1Q04857 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col6a1Q04857 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.55□□□□□ -2
Col6a1Q04857 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Col6a1Q04857 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms