Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Mir6896-201ENSMUST00000198033 73 ntBASIC0.29□□□□□ -2.36
Nkx3-1P97436 Gm45673-201ENSMUST00000210293 358 ntBASIC0.29□□□□□ -2.36
Nkx3-1P97436 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.29□□□□□ -2.36
Nkx3-1P97436 Mir324-201ENSMUST00000083600 89 ntBASIC0.29□□□□□ -2.36
Nkx3-1P97436 Gm24762-201ENSMUST00000083689 104 ntBASIC0.29□□□□□ -2.36
Nkx3-1P97436 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
Nkx3-1P97436 Gm11904-201ENSMUST00000120562 248 ntBASIC0.28□□□□□ -2.36
Nkx3-1P97436 Gm26116-201ENSMUST00000175600 77 ntBASIC0.28□□□□□ -2.36
Nkx3-1P97436 Gm25235-201ENSMUST00000179933 107 ntBASIC0.28□□□□□ -2.36
Nkx3-1P97436 Mir6336-201ENSMUST00000183581 130 ntBASIC0.28□□□□□ -2.36
Nkx3-1P97436 Gm44211-201ENSMUST00000204867 145 ntBASIC0.28□□□□□ -2.36
Nkx3-1P97436 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.28□□□□□ -2.36
Nkx3-1P97436 Gm26447-201ENSMUST00000082448 129 ntBASIC0.28□□□□□ -2.36
Nkx3-1P97436 Gm25142-201ENSMUST00000082698 107 ntBASIC0.28□□□□□ -2.36
Nkx3-1P97436 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.27□□□□□ -2.37
Nkx3-1P97436 Gm26076-201ENSMUST00000104065 105 ntBASIC0.27□□□□□ -2.37
Nkx3-1P97436 Gm25110-201ENSMUST00000116684 121 ntBASIC0.27□□□□□ -2.37
Nkx3-1P97436 Gm25775-201ENSMUST00000116716 121 ntBASIC0.27□□□□□ -2.37
Nkx3-1P97436 Gm24795-201ENSMUST00000116737 121 ntBASIC0.27□□□□□ -2.37
Nkx3-1P97436 Gm25171-201ENSMUST00000116926 121 ntBASIC0.27□□□□□ -2.37
Nkx3-1P97436 Gm13246-201ENSMUST00000120994 315 ntBASIC0.27□□□□□ -2.37
Nkx3-1P97436 Gm13797-201ENSMUST00000121792 120 ntBASIC0.27□□□□□ -2.37
Nkx3-1P97436 Gm24963-201ENSMUST00000157916 144 ntBASIC0.27□□□□□ -2.37
Nkx3-1P97436 Gm23838-201ENSMUST00000158067 162 ntBASIC0.27□□□□□ -2.37
Nkx3-1P97436 Mir1933-201ENSMUST00000158930 88 ntBASIC0.27□□□□□ -2.37
Nkx3-1P97436 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.27□□□□□ -2.37
Nkx3-1P97436 Gm29107-201ENSMUST00000190910 347 ntBASIC0.27□□□□□ -2.37
Nkx3-1P97436 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.27□□□□□ -2.37
Nkx3-1P97436 Gm25634-201ENSMUST00000082667 105 ntBASIC0.27□□□□□ -2.37
Nkx3-1P97436 Mir181a-2-201ENSMUST00000083489 76 ntBASIC0.27□□□□□ -2.37
Nkx3-1P97436 Gm24764-201ENSMUST00000083686 199 ntBASIC0.27□□□□□ -2.37
Nkx3-1P97436 Gm25538-201ENSMUST00000101943 107 ntBASIC0.26□□□□□ -2.37
Nkx3-1P97436 Gm24423-201ENSMUST00000101982 106 ntBASIC0.26□□□□□ -2.37
Nkx3-1P97436 Mir710-201ENSMUST00000102088 110 ntBASIC0.26□□□□□ -2.37
Nkx3-1P97436 Gm14792-201ENSMUST00000119725 258 ntBASIC0.26□□□□□ -2.37
Nkx3-1P97436 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
Nkx3-1P97436 Gm24635-201ENSMUST00000122712 128 ntBASIC0.26□□□□□ -2.37
Nkx3-1P97436 Gm22491-201ENSMUST00000157190 102 ntBASIC0.26□□□□□ -2.37
Nkx3-1P97436 Gm25882-201ENSMUST00000157784 85 ntBASIC0.26□□□□□ -2.37
Nkx3-1P97436 Gm26402-201ENSMUST00000158499 113 ntBASIC0.26□□□□□ -2.37
Nkx3-1P97436 Gm23002-201ENSMUST00000179221 107 ntBASIC0.26□□□□□ -2.37
Nkx3-1P97436 Gm27585-201ENSMUST00000183717 199 ntBASIC0.26□□□□□ -2.37
Nkx3-1P97436 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Nkx3-1P97436 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC0.26□□□□□ -2.37
Nkx3-1P97436 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.26□□□□□ -2.37
Nkx3-1P97436 Mir532-201ENSMUST00000093630 96 ntBASIC0.26□□□□□ -2.37
Nkx3-1P97436 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.25□□□□□ -2.37
Nkx3-1P97436 Gm23655-201ENSMUST00000122627 105 ntBASIC0.25□□□□□ -2.37
Nkx3-1P97436 Gm26152-201ENSMUST00000157427 101 ntBASIC0.25□□□□□ -2.37
Nkx3-1P97436 Gm24476-201ENSMUST00000157437 131 ntBASIC0.25□□□□□ -2.37
Nkx3-1P97436 Gm22216-201ENSMUST00000157557 114 ntBASIC0.25□□□□□ -2.37
Nkx3-1P97436 Gm22088-201ENSMUST00000158341 117 ntBASIC0.25□□□□□ -2.37
Nkx3-1P97436 Gm23579-201ENSMUST00000158528 103 ntBASIC0.25□□□□□ -2.37
Nkx3-1P97436 Gm23375-201ENSMUST00000175407 83 ntBASIC0.25□□□□□ -2.37
Nkx3-1P97436 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.25□□□□□ -2.37
Nkx3-1P97436 Gm27747-201ENSMUST00000184707 85 ntBASIC0.25□□□□□ -2.37
Nkx3-1P97436 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.25□□□□□ -2.37
Nkx3-1P97436 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Nkx3-1P97436 Gm26326-201ENSMUST00000083070 129 ntBASIC0.25□□□□□ -2.37
Nkx3-1P97436 Mir709-201ENSMUST00000102190 88 ntBASIC0.24□□□□□ -2.37
Nkx3-1P97436 Snord69-201ENSMUST00000104024 80 ntBASIC0.24□□□□□ -2.37
Nkx3-1P97436 Gm15069-201ENSMUST00000117792 192 ntBASIC0.24□□□□□ -2.37
Nkx3-1P97436 Gm15068-201ENSMUST00000119796 192 ntBASIC0.24□□□□□ -2.37
Nkx3-1P97436 Gm23466-201ENSMUST00000157133 106 ntBASIC0.24□□□□□ -2.37
Nkx3-1P97436 Gm25393-201ENSMUST00000157336 285 ntBASIC0.24□□□□□ -2.37
Nkx3-1P97436 Gm22767-201ENSMUST00000158365 165 ntBASIC0.24□□□□□ -2.37
Nkx3-1P97436 Gm22434-201ENSMUST00000158549 122 ntBASIC0.24□□□□□ -2.37
Nkx3-1P97436 Gm23180-201ENSMUST00000158686 125 ntBASIC0.24□□□□□ -2.37
Nkx3-1P97436 Gm17919-201ENSMUST00000173344 312 ntBASIC0.24□□□□□ -2.37
Nkx3-1P97436 Gm23416-201ENSMUST00000175520 95 ntBASIC0.24□□□□□ -2.37
Nkx3-1P97436 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
Nkx3-1P97436 Gm28016-201ENSMUST00000184594 196 ntBASIC0.24□□□□□ -2.37
Nkx3-1P97436 Gm27607-201ENSMUST00000185162 122 ntBASIC0.24□□□□□ -2.37
Nkx3-1P97436 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.24□□□□□ -2.37
Nkx3-1P97436 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.24□□□□□ -2.37
Nkx3-1P97436 Gm23451-201ENSMUST00000083328 122 ntBASIC0.24□□□□□ -2.37
Nkx3-1P97436 Mir146-201ENSMUST00000083667 65 ntBASIC0.24□□□□□ -2.37
Nkx3-1P97436 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.24□□□□□ -2.37
Nkx3-1P97436 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
Nkx3-1P97436 Gm23531-201ENSMUST00000104567 68 ntBASIC0.23□□□□□ -2.37
Nkx3-1P97436 Gm14946-201ENSMUST00000119859 296 ntBASIC0.23□□□□□ -2.37
Nkx3-1P97436 Gm6985-201ENSMUST00000121255 271 ntBASIC0.23□□□□□ -2.37
Nkx3-1P97436 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.23□□□□□ -2.37
Nkx3-1P97436 Gm23853-201ENSMUST00000158375 104 ntBASIC0.23□□□□□ -2.37
Nkx3-1P97436 Gm23581-201ENSMUST00000158531 63 ntBASIC0.23□□□□□ -2.37
Nkx3-1P97436 Gm25718-201ENSMUST00000158632 118 ntBASIC0.23□□□□□ -2.37
Nkx3-1P97436 Gm6003-201ENSMUST00000187903 463 ntBASIC0.23□□□□□ -2.37
Nkx3-1P97436 Gm37715-201ENSMUST00000193206 235 ntBASIC0.23□□□□□ -2.37
Nkx3-1P97436 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.23□□□□□ -2.37
Nkx3-1P97436 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.22□□□□□ -2.37
Nkx3-1P97436 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.22□□□□□ -2.37
Nkx3-1P97436 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.22□□□□□ -2.37
Nkx3-1P97436 Mir669f-201ENSMUST00000103850 121 ntBASIC0.22□□□□□ -2.37
Nkx3-1P97436 Gm15289-201ENSMUST00000117793 244 ntBASIC0.22□□□□□ -2.37
Nkx3-1P97436 Gm23994-201ENSMUST00000158059 88 ntBASIC0.22□□□□□ -2.37
Nkx3-1P97436 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.22□□□□□ -2.37
Nkx3-1P97436 Gm22887-201ENSMUST00000178586 107 ntBASIC0.22□□□□□ -2.37
Nkx3-1P97436 Mir3970-201ENSMUST00000199287 90 ntBASIC0.22□□□□□ -2.37
Nkx3-1P97436 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.22□□□□□ -2.37
Nkx3-1P97436 Gm25135-201ENSMUST00000082648 143 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms