Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 PCNAP4-201ENST00000532690 730 ntBASIC5.57□□□□□ -1.52
LIM2P55344 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.57□□□□□ -1.52
LIM2P55344 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.57□□□□□ -1.52
LIM2P55344 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.57□□□□□ -1.52
LIM2P55344 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LIM2P55344 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.57□□□□□ -1.52
LIM2P55344 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
LIM2P55344 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.57□□□□□ -1.52
LIM2P55344 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.57□□□□□ -1.52
LIM2P55344 AP001357.1-201ENST00000586304 1053 ntBASIC5.57□□□□□ -1.52
LIM2P55344 AL139099.4-201ENST00000614802 114 ntBASIC5.57□□□□□ -1.52
LIM2P55344 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.57□□□□□ -1.52
LIM2P55344 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LIM2P55344 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LIM2P55344 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.57□□□□□ -1.52
LIM2P55344 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LIM2P55344 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
LIM2P55344 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
LIM2P55344 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
LIM2P55344 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LIM2P55344 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIM2P55344 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.56□□□□□ -1.52
LIM2P55344 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LIM2P55344 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LIM2P55344 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
LIM2P55344 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIM2P55344 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIM2P55344 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIM2P55344 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIM2P55344 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.56□□□□□ -1.52
LIM2P55344 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.56□□□□□ -1.52
LIM2P55344 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.56□□□□□ -1.52
LIM2P55344 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.56□□□□□ -1.52
LIM2P55344 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LIM2P55344 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.56□□□□□ -1.52
LIM2P55344 OSTCP1-201ENST00000455507 450 ntBASIC5.56□□□□□ -1.52
LIM2P55344 AC093719.1-201ENST00000480427 441 ntBASIC5.56□□□□□ -1.52
LIM2P55344 AC111000.5-201ENST00000506559 1178 ntBASIC5.56□□□□□ -1.52
LIM2P55344 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.56□□□□□ -1.52
LIM2P55344 ST13P12-201ENST00000508958 1094 ntBASIC5.56□□□□□ -1.52
LIM2P55344 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.56□□□□□ -1.52
LIM2P55344 snoU109.5-201ENST00000516231 132 ntBASIC5.56□□□□□ -1.52
LIM2P55344 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.56□□□□□ -1.52
LIM2P55344 AC090424.1-201ENST00000535243 736 ntBASIC5.56□□□□□ -1.52
LIM2P55344 AC006530.1-201ENST00000555980 571 ntBASIC5.56□□□□□ -1.52
LIM2P55344 AL356801.1-201ENST00000559320 294 ntBASIC5.56□□□□□ -1.52
LIM2P55344 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.56□□□□□ -1.52
LIM2P55344 AL138895.2-201ENST00000603019 178 ntBASIC5.56□□□□□ -1.52
LIM2P55344 AC067773.1-201ENST00000603284 1094 ntBASIC5.56□□□□□ -1.52
LIM2P55344 AL137246.1-201ENST00000607072 977 ntBASIC5.56□□□□□ -1.52
LIM2P55344 FO681491.1-202ENST00000623392 737 ntBASIC5.56□□□□□ -1.52
LIM2P55344 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.56□□□□□ -1.52
LIM2P55344 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
LIM2P55344 AC000095.2-202ENST00000637415 154 ntBASIC5.56□□□□□ -1.52
LIM2P55344 OR11H2-202ENST00000641517 1085 ntBASIC5.56□□□□□ -1.52
LIM2P55344 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIM2P55344 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
LIM2P55344 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
LIM2P55344 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LIM2P55344 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LIM2P55344 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LIM2P55344 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIM2P55344 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LIM2P55344 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.56□□□□□ -1.52
LIM2P55344 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIM2P55344 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIM2P55344 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.56□□□□□ -1.52
LIM2P55344 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.55□□□□□ -1.52
LIM2P55344 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
LIM2P55344 AC138907.8-201ENST00000623981 2256 ntBASIC5.55□□□□□ -1.52
LIM2P55344 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
LIM2P55344 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.55□□□□□ -1.52
LIM2P55344 MELK-211ENST00000545008 2236 ntTSL 2 BASIC5.55□□□□□ -1.52
LIM2P55344 AC087516.1-201ENST00000561236 2428 ntBASIC5.55□□□□□ -1.52
LIM2P55344 AC099654.3-201ENST00000447087 1546 ntBASIC5.55□□□□□ -1.52
LIM2P55344 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.55□□□□□ -1.52
LIM2P55344 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LIM2P55344 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
LIM2P55344 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
LIM2P55344 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
LIM2P55344 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.55□□□□□ -1.52
LIM2P55344 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.55□□□□□ -1.52
LIM2P55344 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LIM2P55344 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.55□□□□□ -1.52
LIM2P55344 DNAJA1P5-201ENST00000440278 943 ntBASIC5.55□□□□□ -1.52
LIM2P55344 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LIM2P55344 AC023141.8-201ENST00000442554 208 ntBASIC5.55□□□□□ -1.52
LIM2P55344 HMGN1P2-201ENST00000445197 310 ntBASIC5.55□□□□□ -1.52
LIM2P55344 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.55□□□□□ -1.52
LIM2P55344 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.55□□□□□ -1.52
LIM2P55344 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LIM2P55344 AL157777.1-201ENST00000468100 304 ntBASIC5.55□□□□□ -1.52
LIM2P55344 RN7SL57P-201ENST00000493687 290 ntBASIC5.55□□□□□ -1.52
LIM2P55344 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.55□□□□□ -1.52
LIM2P55344 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.55□□□□□ -1.52
LIM2P55344 OR51A1P-201ENST00000511110 946 ntBASIC5.55□□□□□ -1.52
LIM2P55344 GAPDHP71-201ENST00000511530 1003 ntBASIC5.55□□□□□ -1.52
LIM2P55344 AC060775.1-201ENST00000518241 520 ntBASIC5.55□□□□□ -1.52
LIM2P55344 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LIM2P55344 AC068305.2-201ENST00000550567 1205 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms