Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC073072.2-201ENST00000447425 348 ntBASIC6.13□□□□□ -1.43
SLC1A1P43005 AC004129.2-201ENST00000457229 287 ntBASIC6.13□□□□□ -1.43
SLC1A1P43005 OR7E157P-201ENST00000494376 911 ntBASIC6.13□□□□□ -1.43
SLC1A1P43005 OR5D2P-201ENST00000524390 911 ntBASIC6.13□□□□□ -1.43
SLC1A1P43005 OR4A41P-201ENST00000533053 928 ntBASIC6.13□□□□□ -1.43
SLC1A1P43005 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.13□□□□□ -1.43
SLC1A1P43005 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.13□□□□□ -1.43
SLC1A1P43005 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.13□□□□□ -1.43
SLC1A1P43005 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.13□□□□□ -1.43
SLC1A1P43005 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.13□□□□□ -1.43
SLC1A1P43005 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.13□□□□□ -1.43
SLC1A1P43005 AC005244.1-201ENST00000582566 339 ntBASIC6.13□□□□□ -1.43
SLC1A1P43005 AC011500.1-201ENST00000601963 469 ntBASIC6.13□□□□□ -1.43
SLC1A1P43005 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.13□□□□□ -1.43
SLC1A1P43005 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.13□□□□□ -1.43
SLC1A1P43005 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.13□□□□□ -1.43
SLC1A1P43005 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.13□□□□□ -1.43
SLC1A1P43005 AC016542.2-201ENST00000624201 619 ntBASIC6.13□□□□□ -1.43
SLC1A1P43005 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.13□□□□□ -1.43
SLC1A1P43005 AC117409.1-201ENST00000470499 1310 ntBASIC6.13□□□□□ -1.43
SLC1A1P43005 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SLC1A1P43005 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
SLC1A1P43005 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SLC1A1P43005 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SLC1A1P43005 QRSL1P1-201ENST00000400977 1540 ntBASIC6.13□□□□□ -1.43
SLC1A1P43005 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SLC1A1P43005 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SLC1A1P43005 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SLC1A1P43005 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SLC1A1P43005 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.13□□□□□ -1.43
SLC1A1P43005 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.13□□□□□ -1.43
SLC1A1P43005 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SLC1A1P43005 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SLC1A1P43005 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SLC1A1P43005 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SLC1A1P43005 AC140134.1-201ENST00000511830 3544 ntBASIC6.12□□□□□ -1.43
SLC1A1P43005 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SLC1A1P43005 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SLC1A1P43005 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SLC1A1P43005 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SLC1A1P43005 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SLC1A1P43005 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SLC1A1P43005 RN7SKP250-201ENST00000363924 321 ntBASIC6.12□□□□□ -1.43
SLC1A1P43005 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SLC1A1P43005 RBBP4P5-201ENST00000398583 1266 ntBASIC6.12□□□□□ -1.43
SLC1A1P43005 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SLC1A1P43005 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.12□□□□□ -1.43
SLC1A1P43005 GAPDHP75-201ENST00000433910 943 ntBASIC6.12□□□□□ -1.43
SLC1A1P43005 AC242426.1-201ENST00000435270 960 ntBASIC6.12□□□□□ -1.43
SLC1A1P43005 TUBB4BP6-201ENST00000437576 479 ntBASIC6.12□□□□□ -1.43
SLC1A1P43005 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.12□□□□□ -1.43
SLC1A1P43005 GEMIN2P1-201ENST00000454246 752 ntBASIC6.12□□□□□ -1.43
SLC1A1P43005 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.12□□□□□ -1.43
SLC1A1P43005 AC106822.1-201ENST00000502647 526 ntBASIC6.12□□□□□ -1.43
SLC1A1P43005 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SLC1A1P43005 AC112484.3-201ENST00000505910 329 ntBASIC6.12□□□□□ -1.43
SLC1A1P43005 AC105384.2-201ENST00000508433 640 ntBASIC6.12□□□□□ -1.43
SLC1A1P43005 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.12□□□□□ -1.43
SLC1A1P43005 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.12□□□□□ -1.43
SLC1A1P43005 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.12□□□□□ -1.43
SLC1A1P43005 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.12□□□□□ -1.43
SLC1A1P43005 AC121758.1-202ENST00000556917 658 ntBASIC6.12□□□□□ -1.43
SLC1A1P43005 AC091078.2-201ENST00000557145 559 ntBASIC6.12□□□□□ -1.43
SLC1A1P43005 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.12□□□□□ -1.43
SLC1A1P43005 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.12□□□□□ -1.43
SLC1A1P43005 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.12□□□□□ -1.43
SLC1A1P43005 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.12□□□□□ -1.43
SLC1A1P43005 AC016590.3-201ENST00000611171 753 ntBASIC6.12□□□□□ -1.43
SLC1A1P43005 uc_338.29-201ENST00000615099 168 ntBASIC6.12□□□□□ -1.43
SLC1A1P43005 AC015712.7-201ENST00000615211 635 ntBASIC6.12□□□□□ -1.43
SLC1A1P43005 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
SLC1A1P43005 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SLC1A1P43005 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SLC1A1P43005 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.12□□□□□ -1.43
SLC1A1P43005 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SLC1A1P43005 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.12□□□□□ -1.43
SLC1A1P43005 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SLC1A1P43005 AC087516.1-201ENST00000561236 2428 ntBASIC6.11□□□□□ -1.43
SLC1A1P43005 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC1A1P43005 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SLC1A1P43005 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC1A1P43005 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC1A1P43005 AC093671.1-201ENST00000624981 2929 ntBASIC6.11□□□□□ -1.43
SLC1A1P43005 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SLC1A1P43005 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SLC1A1P43005 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SLC1A1P43005 RNU1-136P-201ENST00000384181 164 ntBASIC6.11□□□□□ -1.43
SLC1A1P43005 AC087752.1-201ENST00000391360 558 ntBASIC6.11□□□□□ -1.43
SLC1A1P43005 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.11□□□□□ -1.43
SLC1A1P43005 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.11□□□□□ -1.43
SLC1A1P43005 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.11□□□□□ -1.43
SLC1A1P43005 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SLC1A1P43005 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.11□□□□□ -1.43
SLC1A1P43005 AC005077.1-201ENST00000449226 375 ntBASIC6.11□□□□□ -1.43
SLC1A1P43005 AL157777.1-201ENST00000468100 304 ntBASIC6.11□□□□□ -1.43
SLC1A1P43005 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.11□□□□□ -1.43
SLC1A1P43005 AC099521.1-201ENST00000482557 334 ntBASIC6.11□□□□□ -1.43
SLC1A1P43005 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.11□□□□□ -1.43
SLC1A1P43005 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SLC1A1P43005 AC091874.2-201ENST00000505889 720 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms