Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.5□□□□□ -2.49
Col1a1P11087 Gm25207-201ENSMUST00000093745 107 ntBASIC-0.5□□□□□ -2.49
Col1a1P11087 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.51□□□□□ -2.49
Col1a1P11087 Gm14919-201ENSMUST00000120839 390 ntBASIC-0.51□□□□□ -2.49
Col1a1P11087 Gm13560-201ENSMUST00000121865 329 ntBASIC-0.51□□□□□ -2.49
Col1a1P11087 Gm27926-201ENSMUST00000157180 66 ntBASIC-0.51□□□□□ -2.49
Col1a1P11087 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC-0.51□□□□□ -2.49
Col1a1P11087 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.51□□□□□ -2.49
Col1a1P11087 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.51□□□□□ -2.49
Col1a1P11087 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.51□□□□□ -2.49
Col1a1P11087 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.51□□□□□ -2.49
Col1a1P11087 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.51□□□□□ -2.49
Col1a1P11087 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC-0.51□□□□□ -2.49
Col1a1P11087 AC120394.1-201ENSMUST00000217153 351 ntBASIC-0.51□□□□□ -2.49
Col1a1P11087 Gm26437-201ENSMUST00000082595 105 ntBASIC-0.51□□□□□ -2.49
Col1a1P11087 Gm25797-201ENSMUST00000082640 107 ntBASIC-0.51□□□□□ -2.49
Col1a1P11087 Gm24164-201ENSMUST00000093663 104 ntBASIC-0.51□□□□□ -2.49
Col1a1P11087 Mir767-201ENSMUST00000103256 107 ntBASIC-0.52□□□□□ -2.49
Col1a1P11087 Gm14906-201ENSMUST00000119265 390 ntBASIC-0.52□□□□□ -2.49
Col1a1P11087 Gm23072-201ENSMUST00000158243 123 ntBASIC-0.52□□□□□ -2.49
Col1a1P11087 Gm22085-201ENSMUST00000158344 110 ntBASIC-0.52□□□□□ -2.49
Col1a1P11087 Gm26022-201ENSMUST00000158663 108 ntBASIC-0.52□□□□□ -2.49
Col1a1P11087 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.52□□□□□ -2.49
Col1a1P11087 Gm43563-201ENSMUST00000196761 198 ntBASIC-0.52□□□□□ -2.49
Col1a1P11087 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.52□□□□□ -2.49
Col1a1P11087 Gm25081-201ENSMUST00000082534 108 ntBASIC-0.52□□□□□ -2.49
Col1a1P11087 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.53□□□□□ -2.49
Col1a1P11087 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.53□□□□□ -2.49
Col1a1P11087 Gm24440-201ENSMUST00000157236 63 ntBASIC-0.53□□□□□ -2.49
Col1a1P11087 Gm25429-201ENSMUST00000157607 132 ntBASIC-0.53□□□□□ -2.49
Col1a1P11087 Mir1951-201ENSMUST00000157981 89 ntBASIC-0.53□□□□□ -2.49
Col1a1P11087 Gm24073-201ENSMUST00000158177 106 ntBASIC-0.53□□□□□ -2.49
Col1a1P11087 Gm22435-201ENSMUST00000158552 128 ntBASIC-0.53□□□□□ -2.49
Col1a1P11087 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.53□□□□□ -2.49
Col1a1P11087 Gm23194-201ENSMUST00000158813 105 ntBASIC-0.53□□□□□ -2.49
Col1a1P11087 Gm24512-201ENSMUST00000174963 65 ntBASIC-0.53□□□□□ -2.49
Col1a1P11087 Gm22631-201ENSMUST00000179656 94 ntBASIC-0.53□□□□□ -2.49
Col1a1P11087 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.53□□□□□ -2.49
Col1a1P11087 Gm28669-201ENSMUST00000188400 100 ntBASIC-0.53□□□□□ -2.49
Col1a1P11087 Mir7218-201ENSMUST00000200050 59 ntBASIC-0.53□□□□□ -2.49
Col1a1P11087 Gm43884-201ENSMUST00000204251 559 ntBASIC-0.53□□□□□ -2.49
Col1a1P11087 AC164629.1-201ENSMUST00000220250 1113 ntBASIC-0.53□□□□□ -2.49
Col1a1P11087 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.53□□□□□ -2.49
Col1a1P11087 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.53□□□□□ -2.49
Col1a1P11087 Gm24707-201ENSMUST00000082812 107 ntBASIC-0.53□□□□□ -2.49
Col1a1P11087 Gm25204-201ENSMUST00000082843 106 ntBASIC-0.53□□□□□ -2.49
Col1a1P11087 Gm26497-201ENSMUST00000083146 107 ntBASIC-0.53□□□□□ -2.49
Col1a1P11087 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm13518-201ENSMUST00000120018 233 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm11834-201ENSMUST00000122257 585 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm24517-201ENSMUST00000122560 107 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm22733-201ENSMUST00000158094 91 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm23065-201ENSMUST00000158236 130 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm22113-201ENSMUST00000158343 104 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm45543-201ENSMUST00000209327 88 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm24929-201ENSMUST00000083403 139 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Mir190b-201ENSMUST00000104803 80 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm12770-201ENSMUST00000121734 462 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm23232-201ENSMUST00000157300 105 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Mir669k-201ENSMUST00000177742 127 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm25673-201ENSMUST00000179957 127 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm44352-201ENSMUST00000196358 110 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm29817-201ENSMUST00000210098 172 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm45544-201ENSMUST00000211130 88 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 n-R5s183-201ENSMUST00000083939 115 ntBASIC-0.54□□□□□ -2.5
Col1a1P11087 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-0.55□□□□□ -2.5
Col1a1P11087 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
Col1a1P11087 Gm22591-201ENSMUST00000104243 106 ntBASIC-0.55□□□□□ -2.5
Col1a1P11087 Gm22771-201ENSMUST00000104449 91 ntBASIC-0.55□□□□□ -2.5
Col1a1P11087 Gm22031-201ENSMUST00000116945 126 ntBASIC-0.55□□□□□ -2.5
Col1a1P11087 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC-0.55□□□□□ -2.5
Col1a1P11087 Gm25781-201ENSMUST00000122527 84 ntBASIC-0.55□□□□□ -2.5
Col1a1P11087 Gm23715-201ENSMUST00000157354 106 ntBASIC-0.55□□□□□ -2.5
Col1a1P11087 Gm22387-201ENSMUST00000158191 131 ntBASIC-0.55□□□□□ -2.5
Col1a1P11087 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.55□□□□□ -2.5
Col1a1P11087 Gm5001-201ENSMUST00000204361 331 ntBASIC-0.55□□□□□ -2.5
Col1a1P11087 Gm44487-201ENSMUST00000205145 325 ntBASIC-0.55□□□□□ -2.5
Col1a1P11087 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC-0.55□□□□□ -2.5
Col1a1P11087 Gm35558-203ENSMUST00000222264 204 ntBASIC-0.55□□□□□ -2.5
Col1a1P11087 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.55□□□□□ -2.5
Col1a1P11087 Mir350-201ENSMUST00000083639 99 ntBASIC-0.55□□□□□ -2.5
Col1a1P11087 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
Col1a1P11087 Gm26076-201ENSMUST00000104065 105 ntBASIC-0.56□□□□□ -2.5
Col1a1P11087 AC147101.1-201ENSMUST00000217964 312 ntBASIC-0.56□□□□□ -2.5
Col1a1P11087 AC112972.1-201ENSMUST00000227329 365 ntBASIC-0.56□□□□□ -2.5
Col1a1P11087 Gm22248-201ENSMUST00000082482 150 ntBASIC-0.56□□□□□ -2.5
Col1a1P11087 Gm25141-201ENSMUST00000083177 107 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms