Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Vti1aO89116 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Vti1aO89116 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Vti1aO89116 Gm26345-201ENSMUST00000157534 120 ntBASIC2.24□□□□□ -2.05
Vti1aO89116 Gm24237-201ENSMUST00000157790 132 ntBASIC2.24□□□□□ -2.05
Vti1aO89116 Gm22332-201ENSMUST00000158072 126 ntBASIC2.24□□□□□ -2.05
Vti1aO89116 Gm25836-201ENSMUST00000158918 123 ntBASIC2.24□□□□□ -2.05
Vti1aO89116 Mir3094-201ENSMUST00000175121 64 ntBASIC2.24□□□□□ -2.05
Vti1aO89116 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
Vti1aO89116 Gm26213-201ENSMUST00000158582 110 ntBASIC2.23□□□□□ -2.05
Vti1aO89116 Gm45471-201ENSMUST00000211270 281 ntBASIC2.23□□□□□ -2.05
Vti1aO89116 Gm24151-201ENSMUST00000082758 141 ntBASIC2.23□□□□□ -2.05
Vti1aO89116 Mir451a-201ENSMUST00000093557 72 ntBASIC2.23□□□□□ -2.05
Vti1aO89116 Gm24098-201ENSMUST00000102075 109 ntBASIC2.22□□□□□ -2.05
Vti1aO89116 Gm25381-201ENSMUST00000102078 109 ntBASIC2.22□□□□□ -2.05
Vti1aO89116 Gm15289-201ENSMUST00000117793 244 ntBASIC2.22□□□□□ -2.05
Vti1aO89116 Gm15692-201ENSMUST00000152173 352 ntBASIC2.22□□□□□ -2.05
Vti1aO89116 Gm25367-201ENSMUST00000158846 106 ntBASIC2.22□□□□□ -2.05
Vti1aO89116 CT033781.2-201ENSMUST00000221113 153 ntBASIC2.22□□□□□ -2.05
Vti1aO89116 Gm25796-201ENSMUST00000082645 163 ntBASIC2.22□□□□□ -2.05
Vti1aO89116 Gm22884-201ENSMUST00000083127 140 ntBASIC2.22□□□□□ -2.05
Vti1aO89116 Gm26168-201ENSMUST00000083787 112 ntBASIC2.22□□□□□ -2.05
Vti1aO89116 Gm25006-201ENSMUST00000083813 107 ntBASIC2.22□□□□□ -2.05
Vti1aO89116 Gm25089-201ENSMUST00000102015 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm25938-201ENSMUST00000104139 166 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm12309-201ENSMUST00000119889 182 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm26090-201ENSMUST00000157897 128 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm25840-201ENSMUST00000177821 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm24952-201ENSMUST00000177909 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm23682-201ENSMUST00000178146 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm24652-201ENSMUST00000178223 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm22629-201ENSMUST00000178272 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm24021-201ENSMUST00000178435 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm22274-201ENSMUST00000178441 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm22050-201ENSMUST00000178442 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm23688-201ENSMUST00000178502 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm23944-201ENSMUST00000178607 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm26283-201ENSMUST00000178625 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm25452-201ENSMUST00000178776 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm23286-201ENSMUST00000178963 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm22640-201ENSMUST00000179035 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm25984-201ENSMUST00000179129 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm25585-201ENSMUST00000179469 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm26374-201ENSMUST00000179737 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm24040-201ENSMUST00000179786 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm25017-201ENSMUST00000179805 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm23618-201ENSMUST00000179912 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm26284-201ENSMUST00000180107 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm24570-201ENSMUST00000180314 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm24654-201ENSMUST00000180315 79 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm44408-201ENSMUST00000200205 66 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Gm25987-201ENSMUST00000083234 107 ntBASIC2.21□□□□□ -2.06
Vti1aO89116 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Vti1aO89116 Gm23172-201ENSMUST00000157160 124 ntBASIC2.2□□□□□ -2.06
Vti1aO89116 Gm22665-201ENSMUST00000158720 275 ntBASIC2.2□□□□□ -2.06
Vti1aO89116 Gm25730-201ENSMUST00000178753 165 ntBASIC2.2□□□□□ -2.06
Vti1aO89116 Mir7021-201ENSMUST00000197026 63 ntBASIC2.2□□□□□ -2.06
Vti1aO89116 Gm45654-201ENSMUST00000210980 123 ntBASIC2.2□□□□□ -2.06
Vti1aO89116 Gm23109-201ENSMUST00000116867 126 ntBASIC2.19□□□□□ -2.06
Vti1aO89116 Gm22558-201ENSMUST00000157326 95 ntBASIC2.19□□□□□ -2.06
Vti1aO89116 Gm27446-201ENSMUST00000183963 89 ntBASIC2.19□□□□□ -2.06
Vti1aO89116 Mir7016-201ENSMUST00000184308 72 ntBASIC2.19□□□□□ -2.06
Vti1aO89116 Gm22723-201ENSMUST00000083820 129 ntBASIC2.19□□□□□ -2.06
Vti1aO89116 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Vti1aO89116 Mir547-201ENSMUST00000102051 78 ntBASIC2.18□□□□□ -2.06
Vti1aO89116 Gm11792-201ENSMUST00000120640 168 ntBASIC2.18□□□□□ -2.06
Vti1aO89116 Gm25460-201ENSMUST00000157954 127 ntBASIC2.18□□□□□ -2.06
Vti1aO89116 Gm22727-201ENSMUST00000158090 116 ntBASIC2.18□□□□□ -2.06
Vti1aO89116 Snora69-201ENSMUST00000083708 131 ntBASIC2.18□□□□□ -2.06
Vti1aO89116 Gm25377-201ENSMUST00000104334 129 ntBASIC2.17□□□□□ -2.06
Vti1aO89116 Gm23469-201ENSMUST00000157131 104 ntBASIC2.17□□□□□ -2.06
Vti1aO89116 Gm22708-201ENSMUST00000158987 103 ntBASIC2.17□□□□□ -2.06
Vti1aO89116 Gm23289-201ENSMUST00000175615 108 ntBASIC2.17□□□□□ -2.06
Vti1aO89116 Gm23377-201ENSMUST00000082943 126 ntBASIC2.17□□□□□ -2.06
Vti1aO89116 Gm23100-201ENSMUST00000083455 141 ntBASIC2.17□□□□□ -2.06
Vti1aO89116 Gm25091-201ENSMUST00000103997 71 ntBASIC2.16□□□□□ -2.06
Vti1aO89116 Gm37579-201ENSMUST00000194291 142 ntBASIC2.16□□□□□ -2.06
Vti1aO89116 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Vti1aO89116 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.16□□□□□ -2.06
Vti1aO89116 Mir411-201ENSMUST00000083543 82 ntBASIC2.16□□□□□ -2.06
Vti1aO89116 Mir223-201ENSMUST00000102112 110 ntBASIC2.15□□□□□ -2.07
Vti1aO89116 Gm23342-201ENSMUST00000158958 115 ntBASIC2.15□□□□□ -2.07
Vti1aO89116 Mir7225-201ENSMUST00000184178 54 ntBASIC2.15□□□□□ -2.07
Vti1aO89116 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC2.15□□□□□ -2.07
Vti1aO89116 Mir669n-201ENSMUST00000158636 54 ntBASIC2.14□□□□□ -2.07
Vti1aO89116 Gm27511-201ENSMUST00000183502 127 ntBASIC2.14□□□□□ -2.07
Vti1aO89116 Gm42844-201ENSMUST00000200355 112 ntBASIC2.14□□□□□ -2.07
Vti1aO89116 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.14□□□□□ -2.07
Vti1aO89116 Gm24523-201ENSMUST00000083965 132 ntBASIC2.14□□□□□ -2.07
Vti1aO89116 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Vti1aO89116 Mir758-201ENSMUST00000103260 81 ntBASIC2.13□□□□□ -2.07
Vti1aO89116 Gm23907-201ENSMUST00000104595 189 ntBASIC2.13□□□□□ -2.07
Vti1aO89116 Gm24394-201ENSMUST00000158141 123 ntBASIC2.13□□□□□ -2.07
Vti1aO89116 Gm20409-201ENSMUST00000173457 130 ntBASIC2.13□□□□□ -2.07
Vti1aO89116 Gm8034-201ENSMUST00000178853 132 ntBASIC2.13□□□□□ -2.07
Vti1aO89116 Gm16976-205ENSMUST00000227324 226 ntBASIC2.13□□□□□ -2.07
Vti1aO89116 Gm24805-201ENSMUST00000082931 104 ntBASIC2.13□□□□□ -2.07
Vti1aO89116 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.13□□□□□ -2.07
Vti1aO89116 U6.1-201ENSMUST00000157443 101 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 140.2 ms