Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm28559-201ENSMUST00000190532 139 ntBASIC0.76□□□□□ -2.29
Cldn1O88551 Gm42988-201ENSMUST00000198116 225 ntBASIC0.76□□□□□ -2.29
Cldn1O88551 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
Cldn1O88551 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Cldn1O88551 Gm25895-201ENSMUST00000083714 100 ntBASIC0.76□□□□□ -2.29
Cldn1O88551 Gm26421-201ENSMUST00000104279 132 ntBASIC0.75□□□□□ -2.29
Cldn1O88551 Mir669g-201ENSMUST00000116809 123 ntBASIC0.75□□□□□ -2.29
Cldn1O88551 Gm14671-201ENSMUST00000121790 262 ntBASIC0.75□□□□□ -2.29
Cldn1O88551 Gm25323-201ENSMUST00000122555 103 ntBASIC0.75□□□□□ -2.29
Cldn1O88551 Gm26090-201ENSMUST00000157897 128 ntBASIC0.75□□□□□ -2.29
Cldn1O88551 Gm22675-201ENSMUST00000158430 104 ntBASIC0.75□□□□□ -2.29
Cldn1O88551 Gm24880-201ENSMUST00000158776 85 ntBASIC0.75□□□□□ -2.29
Cldn1O88551 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.75□□□□□ -2.29
Cldn1O88551 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.75□□□□□ -2.29
Cldn1O88551 Gm16404-201ENSMUST00000177739 468 ntBASIC0.75□□□□□ -2.29
Cldn1O88551 Gm14598-201ENSMUST00000180109 468 ntBASIC0.75□□□□□ -2.29
Cldn1O88551 Gm14625-201ENSMUST00000180231 468 ntBASIC0.75□□□□□ -2.29
Cldn1O88551 Gm27974-201ENSMUST00000183415 105 ntBASIC0.75□□□□□ -2.29
Cldn1O88551 Gm44989-201ENSMUST00000204749 217 ntBASIC0.75□□□□□ -2.29
Cldn1O88551 Gm18213-201ENSMUST00000207850 178 ntBASIC0.75□□□□□ -2.29
Cldn1O88551 Gm24920-201ENSMUST00000083018 85 ntBASIC0.75□□□□□ -2.29
Cldn1O88551 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Cldn1O88551 Gm24555-201ENSMUST00000104548 124 ntBASIC0.74□□□□□ -2.29
Cldn1O88551 Gm15069-201ENSMUST00000117792 192 ntBASIC0.74□□□□□ -2.29
Cldn1O88551 Gm15068-201ENSMUST00000119796 192 ntBASIC0.74□□□□□ -2.29
Cldn1O88551 Gm23655-201ENSMUST00000122627 105 ntBASIC0.74□□□□□ -2.29
Cldn1O88551 Gm24559-201ENSMUST00000157519 121 ntBASIC0.74□□□□□ -2.29
Cldn1O88551 Gm25184-201ENSMUST00000157753 163 ntBASIC0.74□□□□□ -2.29
Cldn1O88551 Gm22163-201ENSMUST00000158408 135 ntBASIC0.74□□□□□ -2.29
Cldn1O88551 Gm25267-201ENSMUST00000158522 63 ntBASIC0.74□□□□□ -2.29
Cldn1O88551 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.74□□□□□ -2.29
Cldn1O88551 Gm24762-201ENSMUST00000083689 104 ntBASIC0.74□□□□□ -2.29
Cldn1O88551 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Cldn1O88551 Mir466b-8-201ENSMUST00000103883 86 ntBASIC0.73□□□□□ -2.29
Cldn1O88551 Gm24867-201ENSMUST00000104161 107 ntBASIC0.73□□□□□ -2.29
Cldn1O88551 Gm26293-201ENSMUST00000104170 84 ntBASIC0.73□□□□□ -2.29
Cldn1O88551 Gm22544-201ENSMUST00000104349 127 ntBASIC0.73□□□□□ -2.29
Cldn1O88551 Snord89-201ENSMUST00000104516 110 ntBASIC0.73□□□□□ -2.29
Cldn1O88551 Gm22387-201ENSMUST00000158191 131 ntBASIC0.73□□□□□ -2.29
Cldn1O88551 Gm22515-201ENSMUST00000158273 305 ntBASIC0.73□□□□□ -2.29
Cldn1O88551 Gm22433-201ENSMUST00000158550 142 ntBASIC0.73□□□□□ -2.29
Cldn1O88551 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.73□□□□□ -2.29
Cldn1O88551 Gm23977-201ENSMUST00000177871 74 ntBASIC0.73□□□□□ -2.29
Cldn1O88551 Gm44409-201ENSMUST00000198810 166 ntBASIC0.73□□□□□ -2.29
Cldn1O88551 Mir466e-201ENSMUST00000198862 84 ntBASIC0.73□□□□□ -2.29
Cldn1O88551 Mir466c-1-201ENSMUST00000200654 84 ntBASIC0.73□□□□□ -2.29
Cldn1O88551 Gm24729-201ENSMUST00000158225 137 ntBASIC0.72□□□□□ -2.29
Cldn1O88551 Gm22914-201ENSMUST00000175195 77 ntBASIC0.72□□□□□ -2.29
Cldn1O88551 Gm37997-201ENSMUST00000193515 267 ntBASIC0.72□□□□□ -2.29
Cldn1O88551 Mir468-201ENSMUST00000197332 78 ntBASIC0.72□□□□□ -2.29
Cldn1O88551 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.72□□□□□ -2.29
Cldn1O88551 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.72□□□□□ -2.29
Cldn1O88551 Snora20-201ENSMUST00000082703 128 ntBASIC0.72□□□□□ -2.29
Cldn1O88551 Gm22809-201ENSMUST00000082743 156 ntBASIC0.72□□□□□ -2.29
Cldn1O88551 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.72□□□□□ -2.29
Cldn1O88551 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Cldn1O88551 Gm26156-201ENSMUST00000116999 123 ntBASIC0.71□□□□□ -2.3
Cldn1O88551 Gm24401-201ENSMUST00000157868 91 ntBASIC0.71□□□□□ -2.3
Cldn1O88551 Gm24323-201ENSMUST00000175342 77 ntBASIC0.71□□□□□ -2.3
Cldn1O88551 Gm44301-201ENSMUST00000200362 143 ntBASIC0.71□□□□□ -2.3
Cldn1O88551 AC161426.1-201ENSMUST00000214137 286 ntBASIC0.71□□□□□ -2.3
Cldn1O88551 Gm24311-201ENSMUST00000082570 104 ntBASIC0.71□□□□□ -2.3
Cldn1O88551 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Cldn1O88551 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.7□□□□□ -2.3
Cldn1O88551 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.7□□□□□ -2.3
Cldn1O88551 Gm22689-201ENSMUST00000102452 110 ntBASIC0.7□□□□□ -2.3
Cldn1O88551 Gm26279-201ENSMUST00000157095 102 ntBASIC0.7□□□□□ -2.3
Cldn1O88551 Gm24015-201ENSMUST00000157725 232 ntBASIC0.7□□□□□ -2.3
Cldn1O88551 Gm25494-201ENSMUST00000158143 100 ntBASIC0.7□□□□□ -2.3
Cldn1O88551 Gm24772-201ENSMUST00000158507 110 ntBASIC0.7□□□□□ -2.3
Cldn1O88551 Mir1961-201ENSMUST00000158643 112 ntBASIC0.7□□□□□ -2.3
Cldn1O88551 Gm25633-201ENSMUST00000178565 107 ntBASIC0.7□□□□□ -2.3
Cldn1O88551 Gm38323-201ENSMUST00000192450 210 ntBASIC0.7□□□□□ -2.3
Cldn1O88551 Mir186-201ENSMUST00000083497 71 ntBASIC0.7□□□□□ -2.3
Cldn1O88551 Gm23130-201ENSMUST00000104252 74 ntBASIC0.69□□□□□ -2.3
Cldn1O88551 Gm19790-201ENSMUST00000214414 251 ntBASIC0.69□□□□□ -2.3
Cldn1O88551 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
Cldn1O88551 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.68□□□□□ -2.3
Cldn1O88551 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.68□□□□□ -2.3
Cldn1O88551 Gm23545-201ENSMUST00000158205 104 ntBASIC0.68□□□□□ -2.3
Cldn1O88551 Gm26160-201ENSMUST00000158965 63 ntBASIC0.68□□□□□ -2.3
Cldn1O88551 Gm38364-201ENSMUST00000191814 179 ntBASIC0.68□□□□□ -2.3
Cldn1O88551 Mir6375-201ENSMUST00000197176 95 ntBASIC0.68□□□□□ -2.3
Cldn1O88551 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.68□□□□□ -2.3
Cldn1O88551 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.68□□□□□ -2.3
Cldn1O88551 Mir33-201ENSMUST00000083531 69 ntBASIC0.68□□□□□ -2.3
Cldn1O88551 Gm13922-201ENSMUST00000119505 156 ntBASIC0.67□□□□□ -2.3
Cldn1O88551 Gm25654-201ENSMUST00000158467 88 ntBASIC0.67□□□□□ -2.3
Cldn1O88551 Mir3109-201ENSMUST00000175301 88 ntBASIC0.67□□□□□ -2.3
Cldn1O88551 Gm27672-201ENSMUST00000183751 204 ntBASIC0.67□□□□□ -2.3
Cldn1O88551 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.67□□□□□ -2.3
Cldn1O88551 Gm12771-201ENSMUST00000120246 135 ntBASIC0.66□□□□□ -2.3
Cldn1O88551 Gm13345-201ENSMUST00000121928 228 ntBASIC0.66□□□□□ -2.3
Cldn1O88551 Gm25390-201ENSMUST00000157341 103 ntBASIC0.66□□□□□ -2.3
Cldn1O88551 Gm20386-201ENSMUST00000174010 132 ntBASIC0.66□□□□□ -2.3
Cldn1O88551 Gm23375-201ENSMUST00000175407 83 ntBASIC0.66□□□□□ -2.3
Cldn1O88551 Gm25464-201ENSMUST00000175481 107 ntBASIC0.66□□□□□ -2.3
Cldn1O88551 Gm23141-201ENSMUST00000178682 94 ntBASIC0.66□□□□□ -2.3
Cldn1O88551 Gm27402-201ENSMUST00000183890 120 ntBASIC0.66□□□□□ -2.3
Cldn1O88551 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 377.5 ms