Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm23655-201ENSMUST00000122627 105 ntBASIC0.76□□□□□ -2.29
Col5a1O88207 Gm25961-201ENSMUST00000157174 135 ntBASIC0.76□□□□□ -2.29
Col5a1O88207 Gm25424-201ENSMUST00000157612 58 ntBASIC0.76□□□□□ -2.29
Col5a1O88207 Gm25015-201ENSMUST00000158400 128 ntBASIC0.76□□□□□ -2.29
Col5a1O88207 Gm25716-201ENSMUST00000158628 104 ntBASIC0.76□□□□□ -2.29
Col5a1O88207 Gm23194-201ENSMUST00000158813 105 ntBASIC0.76□□□□□ -2.29
Col5a1O88207 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.76□□□□□ -2.29
Col5a1O88207 Gm5002-201ENSMUST00000207145 223 ntBASIC0.76□□□□□ -2.29
Col5a1O88207 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.76□□□□□ -2.29
Col5a1O88207 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.76□□□□□ -2.29
Col5a1O88207 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.76□□□□□ -2.29
Col5a1O88207 Gm23461-201ENSMUST00000083265 107 ntBASIC0.76□□□□□ -2.29
Col5a1O88207 Gm26339-201ENSMUST00000102368 99 ntBASIC0.75□□□□□ -2.29
Col5a1O88207 Gm13922-201ENSMUST00000119505 156 ntBASIC0.75□□□□□ -2.29
Col5a1O88207 Gm26482-201ENSMUST00000158015 62 ntBASIC0.75□□□□□ -2.29
Col5a1O88207 Gm25654-201ENSMUST00000158467 88 ntBASIC0.75□□□□□ -2.29
Col5a1O88207 Gm26285-201ENSMUST00000177923 107 ntBASIC0.75□□□□□ -2.29
Col5a1O88207 Gm28409-201ENSMUST00000187064 103 ntBASIC0.75□□□□□ -2.29
Col5a1O88207 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.75□□□□□ -2.29
Col5a1O88207 Gm23622-201ENSMUST00000082460 107 ntBASIC0.75□□□□□ -2.29
Col5a1O88207 Gm26225-201ENSMUST00000082508 135 ntBASIC0.75□□□□□ -2.29
Col5a1O88207 Gm24258-201ENSMUST00000083739 133 ntBASIC0.75□□□□□ -2.29
Col5a1O88207 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Col5a1O88207 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.75□□□□□ -2.29
Col5a1O88207 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.75□□□□□ -2.29
Col5a1O88207 Mir3109-201ENSMUST00000175301 88 ntBASIC0.75□□□□□ -2.29
Col5a1O88207 Gm22884-201ENSMUST00000083127 140 ntBASIC0.75□□□□□ -2.29
Col5a1O88207 Gm24929-201ENSMUST00000083403 139 ntBASIC0.75□□□□□ -2.29
Col5a1O88207 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.74□□□□□ -2.29
Col5a1O88207 Gm11856-201ENSMUST00000118712 276 ntBASIC0.74□□□□□ -2.29
Col5a1O88207 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.74□□□□□ -2.29
Col5a1O88207 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.74□□□□□ -2.29
Col5a1O88207 Gm22612-201ENSMUST00000158293 101 ntBASIC0.74□□□□□ -2.29
Col5a1O88207 Gm28344-201ENSMUST00000185704 279 ntBASIC0.74□□□□□ -2.29
Col5a1O88207 Gm37693-201ENSMUST00000194562 234 ntBASIC0.74□□□□□ -2.29
Col5a1O88207 Gm44057-201ENSMUST00000204547 96 ntBASIC0.74□□□□□ -2.29
Col5a1O88207 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.74□□□□□ -2.29
Col5a1O88207 Gm25627-201ENSMUST00000084003 153 ntBASIC0.74□□□□□ -2.29
Col5a1O88207 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
Col5a1O88207 Gm25538-201ENSMUST00000101943 107 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 Gm22373-201ENSMUST00000104584 89 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 Gm12449-201ENSMUST00000117572 234 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 Mir1949-201ENSMUST00000157434 141 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 Gm22337-201ENSMUST00000157721 132 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 Gm23898-201ENSMUST00000158111 103 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 Gm25494-201ENSMUST00000158143 100 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 Gm26360-201ENSMUST00000158872 103 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 Gm20477-201ENSMUST00000174028 280 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 Gm38364-201ENSMUST00000191814 179 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 Gm19790-201ENSMUST00000214414 251 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Col5a1O88207 Gm23735-201ENSMUST00000082551 134 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 Gm24375-201ENSMUST00000104397 132 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 Gm22082-201ENSMUST00000157587 161 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 Gm22967-201ENSMUST00000157956 239 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 Gm22425-201ENSMUST00000158532 138 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 Gm23208-201ENSMUST00000158666 127 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
Col5a1O88207 Gm27980-201ENSMUST00000184094 169 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.73□□□□□ -2.29
Col5a1O88207 Snord100-201ENSMUST00000116836 74 ntBASIC0.72□□□□□ -2.29
Col5a1O88207 Gm14937-201ENSMUST00000119709 208 ntBASIC0.72□□□□□ -2.29
Col5a1O88207 Gm13246-201ENSMUST00000120994 315 ntBASIC0.72□□□□□ -2.29
Col5a1O88207 Gm25828-201ENSMUST00000157087 95 ntBASIC0.72□□□□□ -2.29
Col5a1O88207 Gm24476-201ENSMUST00000157437 131 ntBASIC0.72□□□□□ -2.29
Col5a1O88207 Gm25223-201ENSMUST00000158200 110 ntBASIC0.72□□□□□ -2.29
Col5a1O88207 Gm24345-201ENSMUST00000158706 124 ntBASIC0.72□□□□□ -2.29
Col5a1O88207 Gm25035-201ENSMUST00000175414 77 ntBASIC0.72□□□□□ -2.29
Col5a1O88207 Gm25464-201ENSMUST00000175481 107 ntBASIC0.72□□□□□ -2.29
Col5a1O88207 Mir7091-201ENSMUST00000184075 79 ntBASIC0.72□□□□□ -2.29
Col5a1O88207 Gm44326-201ENSMUST00000198226 101 ntBASIC0.72□□□□□ -2.29
Col5a1O88207 Snord80-202ENSMUST00000199023 77 ntBASIC0.72□□□□□ -2.29
Col5a1O88207 Gm43944-201ENSMUST00000205220 120 ntBASIC0.72□□□□□ -2.29
Col5a1O88207 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.72□□□□□ -2.29
Col5a1O88207 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Col5a1O88207 Gm22336-201ENSMUST00000157719 107 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 Gm25599-201ENSMUST00000157816 103 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 Gm22332-201ENSMUST00000158072 126 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 Gm22163-201ENSMUST00000158408 135 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 Gm26160-201ENSMUST00000158965 63 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 Gm43602-201ENSMUST00000196772 300 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 Gm44464-201ENSMUST00000198010 138 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 Gm24038-201ENSMUST00000082872 159 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 Gm22738-201ENSMUST00000083440 147 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 Mir302d-201ENSMUST00000083513 66 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 Gm24762-201ENSMUST00000083689 104 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 Mir488-201ENSMUST00000093595 109 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 Gm24171-201ENSMUST00000104126 131 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 Gm26293-201ENSMUST00000104170 84 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 Gm24015-201ENSMUST00000157725 232 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 Gm23080-201ENSMUST00000157846 103 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 Mir7683-201ENSMUST00000183842 61 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 Gm28669-201ENSMUST00000188400 100 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 Mir101a-201ENSMUST00000083517 83 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms