Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm27672-201ENSMUST00000183751 204 ntBASIC0.75□□□□□ -2.29
Trove2O08848 Mir6377-201ENSMUST00000183760 114 ntBASIC0.75□□□□□ -2.29
Trove2O08848 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Trove2O08848 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.75□□□□□ -2.29
Trove2O08848 Gm24121-201ENSMUST00000102029 106 ntBASIC0.74□□□□□ -2.29
Trove2O08848 Gm25506-201ENSMUST00000104339 70 ntBASIC0.74□□□□□ -2.29
Trove2O08848 Gm22433-201ENSMUST00000158550 142 ntBASIC0.74□□□□□ -2.29
Trove2O08848 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.74□□□□□ -2.29
Trove2O08848 Mir3968-201ENSMUST00000175355 100 ntBASIC0.74□□□□□ -2.29
Trove2O08848 Mir6364-201ENSMUST00000183396 86 ntBASIC0.74□□□□□ -2.29
Trove2O08848 Gm25895-201ENSMUST00000083714 100 ntBASIC0.74□□□□□ -2.29
Trove2O08848 Gm26076-201ENSMUST00000104065 105 ntBASIC0.73□□□□□ -2.29
Trove2O08848 Gm12432-201ENSMUST00000119540 186 ntBASIC0.73□□□□□ -2.29
Trove2O08848 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
Trove2O08848 Gm24747-201ENSMUST00000157835 87 ntBASIC0.73□□□□□ -2.29
Trove2O08848 Gm23892-201ENSMUST00000158105 130 ntBASIC0.73□□□□□ -2.29
Trove2O08848 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.73□□□□□ -2.29
Trove2O08848 Gm19790-201ENSMUST00000214414 251 ntBASIC0.73□□□□□ -2.29
Trove2O08848 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.73□□□□□ -2.29
Trove2O08848 Gm26326-201ENSMUST00000083070 129 ntBASIC0.73□□□□□ -2.29
Trove2O08848 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.73□□□□□ -2.29
Trove2O08848 Mir500-201ENSMUST00000093600 92 ntBASIC0.73□□□□□ -2.29
Trove2O08848 Gm22786-201ENSMUST00000104086 122 ntBASIC0.72□□□□□ -2.29
Trove2O08848 Gm27476-201ENSMUST00000183366 104 ntBASIC0.72□□□□□ -2.29
Trove2O08848 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC0.72□□□□□ -2.29
Trove2O08848 AL606472.1-201ENSMUST00000224628 275 ntBASIC0.72□□□□□ -2.29
Trove2O08848 Mir216a-201ENSMUST00000083605 72 ntBASIC0.72□□□□□ -2.29
Trove2O08848 Gm23203-201ENSMUST00000104374 107 ntBASIC0.71□□□□□ -2.3
Trove2O08848 Snord100-201ENSMUST00000116836 74 ntBASIC0.71□□□□□ -2.3
Trove2O08848 Gm26274-201ENSMUST00000157103 321 ntBASIC0.71□□□□□ -2.3
Trove2O08848 Gm26160-201ENSMUST00000158965 63 ntBASIC0.71□□□□□ -2.3
Trove2O08848 Gm25241-201ENSMUST00000174909 84 ntBASIC0.71□□□□□ -2.3
Trove2O08848 Gm26217-201ENSMUST00000175212 84 ntBASIC0.71□□□□□ -2.3
Trove2O08848 Gm23377-201ENSMUST00000082943 126 ntBASIC0.71□□□□□ -2.3
Trove2O08848 Gm25141-201ENSMUST00000083177 107 ntBASIC0.71□□□□□ -2.3
Trove2O08848 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Trove2O08848 Gm26279-201ENSMUST00000157095 102 ntBASIC0.7□□□□□ -2.3
Trove2O08848 Gm25882-201ENSMUST00000157784 85 ntBASIC0.7□□□□□ -2.3
Trove2O08848 Mir1933-201ENSMUST00000158930 88 ntBASIC0.7□□□□□ -2.3
Trove2O08848 Gm38364-201ENSMUST00000191814 179 ntBASIC0.7□□□□□ -2.3
Trove2O08848 Gm44462-201ENSMUST00000199696 129 ntBASIC0.7□□□□□ -2.3
Trove2O08848 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
Trove2O08848 Gm24867-201ENSMUST00000104161 107 ntBASIC0.69□□□□□ -2.3
Trove2O08848 Gm25110-201ENSMUST00000116684 121 ntBASIC0.69□□□□□ -2.3
Trove2O08848 Gm25775-201ENSMUST00000116716 121 ntBASIC0.69□□□□□ -2.3
Trove2O08848 Gm24795-201ENSMUST00000116737 121 ntBASIC0.69□□□□□ -2.3
Trove2O08848 Gm25171-201ENSMUST00000116926 121 ntBASIC0.69□□□□□ -2.3
Trove2O08848 Gm14567-201ENSMUST00000117155 174 ntBASIC0.69□□□□□ -2.3
Trove2O08848 Gm13345-201ENSMUST00000121928 228 ntBASIC0.69□□□□□ -2.3
Trove2O08848 Gm25494-201ENSMUST00000158143 100 ntBASIC0.69□□□□□ -2.3
Trove2O08848 Gm25223-201ENSMUST00000158200 110 ntBASIC0.69□□□□□ -2.3
Trove2O08848 Gm25718-201ENSMUST00000158632 118 ntBASIC0.69□□□□□ -2.3
Trove2O08848 Mir1954-201ENSMUST00000175595 86 ntBASIC0.69□□□□□ -2.3
Trove2O08848 Gm44488-201ENSMUST00000199467 119 ntBASIC0.69□□□□□ -2.3
Trove2O08848 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.69□□□□□ -2.3
Trove2O08848 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Trove2O08848 Gm22796-201ENSMUST00000157234 106 ntBASIC0.68□□□□□ -2.3
Trove2O08848 Gm36956-201ENSMUST00000193830 214 ntBASIC0.68□□□□□ -2.3
Trove2O08848 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.68□□□□□ -2.3
Trove2O08848 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.68□□□□□ -2.3
Trove2O08848 Gm25138-201ENSMUST00000083248 136 ntBASIC0.68□□□□□ -2.3
Trove2O08848 Gm26123-201ENSMUST00000083363 135 ntBASIC0.68□□□□□ -2.3
Trove2O08848 Mir101a-201ENSMUST00000083517 83 ntBASIC0.68□□□□□ -2.3
Trove2O08848 Gm24579-201ENSMUST00000103964 144 ntBASIC0.67□□□□□ -2.3
Trove2O08848 Gm25378-201ENSMUST00000104333 129 ntBASIC0.67□□□□□ -2.3
Trove2O08848 n-R5s87-201ENSMUST00000122752 116 ntBASIC0.67□□□□□ -2.3
Trove2O08848 Gm22951-201ENSMUST00000179471 107 ntBASIC0.67□□□□□ -2.3
Trove2O08848 Gm44909-201ENSMUST00000208756 165 ntBASIC0.67□□□□□ -2.3
Trove2O08848 Gm22744-201ENSMUST00000083444 65 ntBASIC0.67□□□□□ -2.3
Trove2O08848 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Trove2O08848 Gm26301-201ENSMUST00000104813 95 ntBASIC0.66□□□□□ -2.3
Trove2O08848 Gm22482-201ENSMUST00000122563 359 ntBASIC0.66□□□□□ -2.3
Trove2O08848 Gm25654-201ENSMUST00000158467 88 ntBASIC0.66□□□□□ -2.3
Trove2O08848 Mir3109-201ENSMUST00000175301 88 ntBASIC0.66□□□□□ -2.3
Trove2O08848 Gm27289-201ENSMUST00000183341 82 ntBASIC0.66□□□□□ -2.3
Trove2O08848 Mir466p-201ENSMUST00000103925 89 ntBASIC0.65□□□□□ -2.31
Trove2O08848 Gm6952-201ENSMUST00000118629 159 ntBASIC0.65□□□□□ -2.31
Trove2O08848 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC0.65□□□□□ -2.31
Trove2O08848 Gm24509-201ENSMUST00000157086 101 ntBASIC0.65□□□□□ -2.31
Trove2O08848 Gm25358-201ENSMUST00000157189 101 ntBASIC0.65□□□□□ -2.31
Trove2O08848 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.65□□□□□ -2.31
Trove2O08848 Gm23141-201ENSMUST00000178682 94 ntBASIC0.65□□□□□ -2.31
Trove2O08848 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Trove2O08848 Gm23853-201ENSMUST00000158375 104 ntBASIC0.64□□□□□ -2.31
Trove2O08848 Gm25749-201ENSMUST00000175485 111 ntBASIC0.64□□□□□ -2.31
Trove2O08848 Gm22887-201ENSMUST00000178586 107 ntBASIC0.64□□□□□ -2.31
Trove2O08848 Gm24415-201ENSMUST00000180218 107 ntBASIC0.64□□□□□ -2.31
Trove2O08848 Rny1-201ENSMUST00000083767 112 ntBASIC0.64□□□□□ -2.31
Trove2O08848 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.64□□□□□ -2.31
Trove2O08848 Gm22999-201ENSMUST00000157082 88 ntBASIC0.63□□□□□ -2.31
Trove2O08848 Gm24547-201ENSMUST00000158649 149 ntBASIC0.63□□□□□ -2.31
Trove2O08848 Gm44211-201ENSMUST00000204867 145 ntBASIC0.63□□□□□ -2.31
Trove2O08848 Mir30a-201ENSMUST00000083471 71 ntBASIC0.63□□□□□ -2.31
Trove2O08848 Mir186-201ENSMUST00000083497 71 ntBASIC0.63□□□□□ -2.31
Trove2O08848 Gm6272-201ENSMUST00000121256 171 ntBASIC0.62□□□□□ -2.31
Trove2O08848 Gm24729-201ENSMUST00000158225 137 ntBASIC0.62□□□□□ -2.31
Trove2O08848 Mir532-201ENSMUST00000093630 96 ntBASIC0.62□□□□□ -2.31
Trove2O08848 Gm25611-201ENSMUST00000104017 133 ntBASIC0.61□□□□□ -2.31
Trove2O08848 Gm24385-201ENSMUST00000122694 350 ntBASIC0.61□□□□□ -2.31
Trove2O08848 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.61□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms