Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Gm10813-201ENSMUST00000099936 90 ntBASIC1.73□□□□□ -2.13
Ptchd4B9EKX1 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Ptchd4B9EKX1 Gm25423-201ENSMUST00000157609 107 ntBASIC1.72□□□□□ -2.13
Ptchd4B9EKX1 Mir6995-201ENSMUST00000183658 71 ntBASIC1.72□□□□□ -2.13
Ptchd4B9EKX1 CT485607.2-201ENSMUST00000214650 91 ntBASIC1.72□□□□□ -2.13
Ptchd4B9EKX1 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.72□□□□□ -2.13
Ptchd4B9EKX1 Gm24523-201ENSMUST00000083965 132 ntBASIC1.72□□□□□ -2.13
Ptchd4B9EKX1 Gm23651-201ENSMUST00000116755 120 ntBASIC1.71□□□□□ -2.14
Ptchd4B9EKX1 Gm24141-201ENSMUST00000122776 115 ntBASIC1.71□□□□□ -2.14
Ptchd4B9EKX1 Gm25920-201ENSMUST00000158307 99 ntBASIC1.71□□□□□ -2.14
Ptchd4B9EKX1 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.71□□□□□ -2.14
Ptchd4B9EKX1 Gm24461-201ENSMUST00000082735 103 ntBASIC1.71□□□□□ -2.14
Ptchd4B9EKX1 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Ptchd4B9EKX1 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Ptchd4B9EKX1 Gm11644-201ENSMUST00000119735 150 ntBASIC1.7□□□□□ -2.14
Ptchd4B9EKX1 Gm23170-201ENSMUST00000157158 106 ntBASIC1.7□□□□□ -2.14
Ptchd4B9EKX1 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.7□□□□□ -2.14
Ptchd4B9EKX1 Snora20-201ENSMUST00000082703 128 ntBASIC1.7□□□□□ -2.14
Ptchd4B9EKX1 Gm23303-201ENSMUST00000082714 152 ntBASIC1.7□□□□□ -2.14
Ptchd4B9EKX1 Snord14a-201ENSMUST00000082807 87 ntBASIC1.7□□□□□ -2.14
Ptchd4B9EKX1 Gm26326-201ENSMUST00000083070 129 ntBASIC1.7□□□□□ -2.14
Ptchd4B9EKX1 Gm15115-201ENSMUST00000121145 264 ntBASIC1.69□□□□□ -2.14
Ptchd4B9EKX1 Gm22966-201ENSMUST00000157957 129 ntBASIC1.69□□□□□ -2.14
Ptchd4B9EKX1 Gm25769-201ENSMUST00000158569 127 ntBASIC1.69□□□□□ -2.14
Ptchd4B9EKX1 Mir5104-201ENSMUST00000175319 94 ntBASIC1.69□□□□□ -2.14
Ptchd4B9EKX1 Gm22775-201ENSMUST00000177630 120 ntBASIC1.69□□□□□ -2.14
Ptchd4B9EKX1 Gm23569-201ENSMUST00000180120 120 ntBASIC1.69□□□□□ -2.14
Ptchd4B9EKX1 Gm24151-201ENSMUST00000082758 141 ntBASIC1.69□□□□□ -2.14
Ptchd4B9EKX1 Gm23445-201ENSMUST00000082800 107 ntBASIC1.69□□□□□ -2.14
Ptchd4B9EKX1 Mir9-2-201ENSMUST00000083490 72 ntBASIC1.69□□□□□ -2.14
Ptchd4B9EKX1 Gm10351-201ENSMUST00000087694 125 ntBASIC1.69□□□□□ -2.14
Ptchd4B9EKX1 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Ptchd4B9EKX1 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.68□□□□□ -2.14
Ptchd4B9EKX1 Mir3096-201ENSMUST00000116685 71 ntBASIC1.68□□□□□ -2.14
Ptchd4B9EKX1 Gm14502-201ENSMUST00000118154 113 ntBASIC1.68□□□□□ -2.14
Ptchd4B9EKX1 Gm15067-201ENSMUST00000119534 156 ntBASIC1.68□□□□□ -2.14
Ptchd4B9EKX1 Gm24747-201ENSMUST00000157835 87 ntBASIC1.68□□□□□ -2.14
Ptchd4B9EKX1 Gm23260-201ENSMUST00000158317 172 ntBASIC1.68□□□□□ -2.14
Ptchd4B9EKX1 Gm24229-201ENSMUST00000158830 118 ntBASIC1.68□□□□□ -2.14
Ptchd4B9EKX1 Gm23967-201ENSMUST00000175062 78 ntBASIC1.68□□□□□ -2.14
Ptchd4B9EKX1 Mir3061-201ENSMUST00000175129 91 ntBASIC1.68□□□□□ -2.14
Ptchd4B9EKX1 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Ptchd4B9EKX1 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.68□□□□□ -2.14
Ptchd4B9EKX1 Gm22576-201ENSMUST00000083733 104 ntBASIC1.68□□□□□ -2.14
Ptchd4B9EKX1 Gm26011-201ENSMUST00000104410 104 ntBASIC1.67□□□□□ -2.14
Ptchd4B9EKX1 Gm22381-201ENSMUST00000158186 107 ntBASIC1.67□□□□□ -2.14
Ptchd4B9EKX1 Gm20391-201ENSMUST00000174722 106 ntBASIC1.67□□□□□ -2.14
Ptchd4B9EKX1 Gm25958-201ENSMUST00000175114 71 ntBASIC1.67□□□□□ -2.14
Ptchd4B9EKX1 Gm23267-201ENSMUST00000178490 132 ntBASIC1.67□□□□□ -2.14
Ptchd4B9EKX1 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.67□□□□□ -2.14
Ptchd4B9EKX1 Gm45492-201ENSMUST00000211611 288 ntBASIC1.67□□□□□ -2.14
Ptchd4B9EKX1 Gm25797-201ENSMUST00000082640 107 ntBASIC1.67□□□□□ -2.14
Ptchd4B9EKX1 Gm25812-201ENSMUST00000082751 103 ntBASIC1.67□□□□□ -2.14
Ptchd4B9EKX1 Gm24406-201ENSMUST00000083026 128 ntBASIC1.67□□□□□ -2.14
Ptchd4B9EKX1 Gm24449-201ENSMUST00000083985 106 ntBASIC1.67□□□□□ -2.14
Ptchd4B9EKX1 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.67□□□□□ -2.14
Ptchd4B9EKX1 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.66□□□□□ -2.14
Ptchd4B9EKX1 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.66□□□□□ -2.14
Ptchd4B9EKX1 Gm25060-201ENSMUST00000157374 130 ntBASIC1.66□□□□□ -2.14
Ptchd4B9EKX1 Gm26090-201ENSMUST00000157897 128 ntBASIC1.66□□□□□ -2.14
Ptchd4B9EKX1 Gm24174-201ENSMUST00000158933 111 ntBASIC1.66□□□□□ -2.14
Ptchd4B9EKX1 Gm22403-201ENSMUST00000174919 84 ntBASIC1.66□□□□□ -2.14
Ptchd4B9EKX1 Gm23714-201ENSMUST00000179259 105 ntBASIC1.66□□□□□ -2.14
Ptchd4B9EKX1 Gm27792-201ENSMUST00000184031 115 ntBASIC1.66□□□□□ -2.14
Ptchd4B9EKX1 Gm25038-201ENSMUST00000082928 130 ntBASIC1.66□□□□□ -2.14
Ptchd4B9EKX1 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Ptchd4B9EKX1 Gm26420-201ENSMUST00000104273 103 ntBASIC1.65□□□□□ -2.15
Ptchd4B9EKX1 Gm24717-201ENSMUST00000157522 124 ntBASIC1.65□□□□□ -2.15
Ptchd4B9EKX1 Gm44384-201ENSMUST00000200208 114 ntBASIC1.65□□□□□ -2.15
Ptchd4B9EKX1 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.65□□□□□ -2.15
Ptchd4B9EKX1 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.64□□□□□ -2.15
Ptchd4B9EKX1 U6.1-201ENSMUST00000157443 101 ntBASIC1.64□□□□□ -2.15
Ptchd4B9EKX1 Gm23558-201ENSMUST00000157823 80 ntBASIC1.64□□□□□ -2.15
Ptchd4B9EKX1 Gm22386-201ENSMUST00000158192 129 ntBASIC1.64□□□□□ -2.15
Ptchd4B9EKX1 Gm23859-201ENSMUST00000158383 64 ntBASIC1.64□□□□□ -2.15
Ptchd4B9EKX1 Gm27511-201ENSMUST00000183502 127 ntBASIC1.64□□□□□ -2.15
Ptchd4B9EKX1 Gm45471-201ENSMUST00000211270 281 ntBASIC1.64□□□□□ -2.15
Ptchd4B9EKX1 Gm22681-201ENSMUST00000083853 106 ntBASIC1.64□□□□□ -2.15
Ptchd4B9EKX1 Mir451a-201ENSMUST00000093557 72 ntBASIC1.64□□□□□ -2.15
Ptchd4B9EKX1 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.63□□□□□ -2.15
Ptchd4B9EKX1 Mir544-201ENSMUST00000103813 78 ntBASIC1.63□□□□□ -2.15
Ptchd4B9EKX1 Gm44489-201ENSMUST00000104619 97 ntBASIC1.63□□□□□ -2.15
Ptchd4B9EKX1 Gm11792-201ENSMUST00000120640 168 ntBASIC1.63□□□□□ -2.15
Ptchd4B9EKX1 Gm25949-201ENSMUST00000175333 114 ntBASIC1.63□□□□□ -2.15
Ptchd4B9EKX1 Mir7675-201ENSMUST00000184262 58 ntBASIC1.63□□□□□ -2.15
Ptchd4B9EKX1 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Ptchd4B9EKX1 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Ptchd4B9EKX1 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.62□□□□□ -2.15
Ptchd4B9EKX1 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.62□□□□□ -2.15
Ptchd4B9EKX1 Gm22999-201ENSMUST00000157082 88 ntBASIC1.62□□□□□ -2.15
Ptchd4B9EKX1 Gm44308-201ENSMUST00000197080 99 ntBASIC1.62□□□□□ -2.15
Ptchd4B9EKX1 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Ptchd4B9EKX1 Mir410-201ENSMUST00000083563 81 ntBASIC1.62□□□□□ -2.15
Ptchd4B9EKX1 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.62□□□□□ -2.15
Ptchd4B9EKX1 Gm14626-201ENSMUST00000117619 216 ntBASIC1.61□□□□□ -2.15
Ptchd4B9EKX1 Gm12309-201ENSMUST00000119889 182 ntBASIC1.61□□□□□ -2.15
Ptchd4B9EKX1 Gm22082-201ENSMUST00000157587 161 ntBASIC1.61□□□□□ -2.15
Ptchd4B9EKX1 Gm23122-201ENSMUST00000157645 103 ntBASIC1.61□□□□□ -2.15
Ptchd4B9EKX1 Gm23277-201ENSMUST00000157914 136 ntBASIC1.61□□□□□ -2.15
Ptchd4B9EKX1 Gm23504-201ENSMUST00000158988 95 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 238.9 ms