Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Snora24-201ENSMUST00000174989 130 ntBASIC0.85□□□□□ -2.27
Cldn3Q9Z0G9 Snora15-201ENSMUST00000177461 131 ntBASIC0.85□□□□□ -2.27
Cldn3Q9Z0G9 Mir669k-201ENSMUST00000177742 127 ntBASIC0.85□□□□□ -2.27
Cldn3Q9Z0G9 Gm25673-201ENSMUST00000179957 127 ntBASIC0.85□□□□□ -2.27
Cldn3Q9Z0G9 Mir7052-201ENSMUST00000184821 65 ntBASIC0.85□□□□□ -2.27
Cldn3Q9Z0G9 Mir468-201ENSMUST00000197332 78 ntBASIC0.85□□□□□ -2.27
Cldn3Q9Z0G9 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
Cldn3Q9Z0G9 Gm24624-201ENSMUST00000082617 164 ntBASIC0.85□□□□□ -2.27
Cldn3Q9Z0G9 Snora20-201ENSMUST00000082703 128 ntBASIC0.85□□□□□ -2.27
Cldn3Q9Z0G9 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.84□□□□□ -2.27
Cldn3Q9Z0G9 Gm23130-201ENSMUST00000104252 74 ntBASIC0.84□□□□□ -2.27
Cldn3Q9Z0G9 Gm22544-201ENSMUST00000104349 127 ntBASIC0.84□□□□□ -2.27
Cldn3Q9Z0G9 Gm6897-201ENSMUST00000117714 138 ntBASIC0.84□□□□□ -2.27
Cldn3Q9Z0G9 Gm14758-201ENSMUST00000119104 138 ntBASIC0.84□□□□□ -2.27
Cldn3Q9Z0G9 Gm24015-201ENSMUST00000157725 232 ntBASIC0.84□□□□□ -2.27
Cldn3Q9Z0G9 Gm22515-201ENSMUST00000158273 305 ntBASIC0.84□□□□□ -2.27
Cldn3Q9Z0G9 Gm22914-201ENSMUST00000175195 77 ntBASIC0.84□□□□□ -2.27
Cldn3Q9Z0G9 Mir7663-201ENSMUST00000183950 61 ntBASIC0.84□□□□□ -2.27
Cldn3Q9Z0G9 Gm44308-201ENSMUST00000197080 99 ntBASIC0.84□□□□□ -2.27
Cldn3Q9Z0G9 Gm44976-201ENSMUST00000205543 261 ntBASIC0.84□□□□□ -2.27
Cldn3Q9Z0G9 Gm18213-201ENSMUST00000207850 178 ntBASIC0.84□□□□□ -2.27
Cldn3Q9Z0G9 Gm45471-201ENSMUST00000211270 281 ntBASIC0.84□□□□□ -2.27
Cldn3Q9Z0G9 AL606472.1-201ENSMUST00000224628 275 ntBASIC0.84□□□□□ -2.27
Cldn3Q9Z0G9 Gm22809-201ENSMUST00000082743 156 ntBASIC0.84□□□□□ -2.27
Cldn3Q9Z0G9 Gm22686-201ENSMUST00000082847 100 ntBASIC0.84□□□□□ -2.27
Cldn3Q9Z0G9 Mir384-201ENSMUST00000083565 88 ntBASIC0.84□□□□□ -2.27
Cldn3Q9Z0G9 Gm23766-201ENSMUST00000103894 80 ntBASIC0.83□□□□□ -2.28
Cldn3Q9Z0G9 Gm25506-201ENSMUST00000104339 70 ntBASIC0.83□□□□□ -2.28
Cldn3Q9Z0G9 Gm15069-201ENSMUST00000117792 192 ntBASIC0.83□□□□□ -2.28
Cldn3Q9Z0G9 Gm15068-201ENSMUST00000119796 192 ntBASIC0.83□□□□□ -2.28
Cldn3Q9Z0G9 Gm22145-201ENSMUST00000157396 148 ntBASIC0.83□□□□□ -2.28
Cldn3Q9Z0G9 Gm26090-201ENSMUST00000157897 128 ntBASIC0.83□□□□□ -2.28
Cldn3Q9Z0G9 Gm23892-201ENSMUST00000158105 130 ntBASIC0.83□□□□□ -2.28
Cldn3Q9Z0G9 Gm22387-201ENSMUST00000158191 131 ntBASIC0.83□□□□□ -2.28
Cldn3Q9Z0G9 Gm25015-201ENSMUST00000158400 128 ntBASIC0.83□□□□□ -2.28
Cldn3Q9Z0G9 Gm25718-201ENSMUST00000158632 118 ntBASIC0.83□□□□□ -2.28
Cldn3Q9Z0G9 Gm16539-201ENSMUST00000160086 327 ntBASIC0.83□□□□□ -2.28
Cldn3Q9Z0G9 Gm27974-201ENSMUST00000183415 105 ntBASIC0.83□□□□□ -2.28
Cldn3Q9Z0G9 Gm24762-201ENSMUST00000083689 104 ntBASIC0.83□□□□□ -2.28
Cldn3Q9Z0G9 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Cldn3Q9Z0G9 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Cldn3Q9Z0G9 Gm22689-201ENSMUST00000102452 110 ntBASIC0.82□□□□□ -2.28
Cldn3Q9Z0G9 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Cldn3Q9Z0G9 Snord19-201ENSMUST00000104609 76 ntBASIC0.82□□□□□ -2.28
Cldn3Q9Z0G9 Gm24559-201ENSMUST00000157519 121 ntBASIC0.82□□□□□ -2.28
Cldn3Q9Z0G9 Gm22767-201ENSMUST00000158365 165 ntBASIC0.82□□□□□ -2.28
Cldn3Q9Z0G9 Gm22433-201ENSMUST00000158550 142 ntBASIC0.82□□□□□ -2.28
Cldn3Q9Z0G9 Mir1954-201ENSMUST00000175595 86 ntBASIC0.82□□□□□ -2.28
Cldn3Q9Z0G9 Gm22951-201ENSMUST00000179471 107 ntBASIC0.82□□□□□ -2.28
Cldn3Q9Z0G9 Gm27476-201ENSMUST00000183366 104 ntBASIC0.82□□□□□ -2.28
Cldn3Q9Z0G9 Gm44989-201ENSMUST00000204749 217 ntBASIC0.82□□□□□ -2.28
Cldn3Q9Z0G9 Gm24311-201ENSMUST00000082570 104 ntBASIC0.82□□□□□ -2.28
Cldn3Q9Z0G9 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.82□□□□□ -2.28
Cldn3Q9Z0G9 Gm24271-201ENSMUST00000102327 111 ntBASIC0.81□□□□□ -2.28
Cldn3Q9Z0G9 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.81□□□□□ -2.28
Cldn3Q9Z0G9 Gm25323-201ENSMUST00000122555 103 ntBASIC0.81□□□□□ -2.28
Cldn3Q9Z0G9 Gm24401-201ENSMUST00000157868 91 ntBASIC0.81□□□□□ -2.28
Cldn3Q9Z0G9 Gm20386-201ENSMUST00000174010 132 ntBASIC0.81□□□□□ -2.28
Cldn3Q9Z0G9 Gm20630-201ENSMUST00000177387 551 ntBASIC0.81□□□□□ -2.28
Cldn3Q9Z0G9 Gm27332-201ENSMUST00000184893 112 ntBASIC0.81□□□□□ -2.28
Cldn3Q9Z0G9 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.81□□□□□ -2.28
Cldn3Q9Z0G9 Gm24929-201ENSMUST00000083403 139 ntBASIC0.81□□□□□ -2.28
Cldn3Q9Z0G9 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Cldn3Q9Z0G9 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
Cldn3Q9Z0G9 Gm16404-201ENSMUST00000177739 468 ntBASIC0.8□□□□□ -2.28
Cldn3Q9Z0G9 Gm14598-201ENSMUST00000180109 468 ntBASIC0.8□□□□□ -2.28
Cldn3Q9Z0G9 Gm14625-201ENSMUST00000180231 468 ntBASIC0.8□□□□□ -2.28
Cldn3Q9Z0G9 Gm25141-201ENSMUST00000083177 107 ntBASIC0.8□□□□□ -2.28
Cldn3Q9Z0G9 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.79□□□□□ -2.28
Cldn3Q9Z0G9 Gm12432-201ENSMUST00000119540 186 ntBASIC0.79□□□□□ -2.28
Cldn3Q9Z0G9 Mir1961-201ENSMUST00000158643 112 ntBASIC0.79□□□□□ -2.28
Cldn3Q9Z0G9 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.79□□□□□ -2.28
Cldn3Q9Z0G9 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.79□□□□□ -2.28
Cldn3Q9Z0G9 Gm44948-201ENSMUST00000209050 149 ntBASIC0.79□□□□□ -2.28
Cldn3Q9Z0G9 Gm22744-201ENSMUST00000083444 65 ntBASIC0.79□□□□□ -2.28
Cldn3Q9Z0G9 Gm26301-201ENSMUST00000104813 95 ntBASIC0.78□□□□□ -2.28
Cldn3Q9Z0G9 Gm25267-201ENSMUST00000158522 63 ntBASIC0.78□□□□□ -2.28
Cldn3Q9Z0G9 Gm38323-201ENSMUST00000192450 210 ntBASIC0.78□□□□□ -2.28
Cldn3Q9Z0G9 Gm42533-201ENSMUST00000196247 157 ntBASIC0.78□□□□□ -2.28
Cldn3Q9Z0G9 Rny1-201ENSMUST00000083767 112 ntBASIC0.78□□□□□ -2.28
Cldn3Q9Z0G9 Gm25223-201ENSMUST00000158200 110 ntBASIC0.77□□□□□ -2.29
Cldn3Q9Z0G9 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.77□□□□□ -2.29
Cldn3Q9Z0G9 Gm25749-201ENSMUST00000175485 111 ntBASIC0.77□□□□□ -2.29
Cldn3Q9Z0G9 Gm38113-201ENSMUST00000193704 201 ntBASIC0.77□□□□□ -2.29
Cldn3Q9Z0G9 Gm25895-201ENSMUST00000083714 100 ntBASIC0.77□□□□□ -2.29
Cldn3Q9Z0G9 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.77□□□□□ -2.29
Cldn3Q9Z0G9 Mir669g-201ENSMUST00000116809 123 ntBASIC0.76□□□□□ -2.29
Cldn3Q9Z0G9 Gm13922-201ENSMUST00000119505 156 ntBASIC0.76□□□□□ -2.29
Cldn3Q9Z0G9 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.76□□□□□ -2.29
Cldn3Q9Z0G9 Gm22675-201ENSMUST00000158430 104 ntBASIC0.76□□□□□ -2.29
Cldn3Q9Z0G9 Gm25044-201ENSMUST00000158603 104 ntBASIC0.76□□□□□ -2.29
Cldn3Q9Z0G9 Gm25464-201ENSMUST00000175481 107 ntBASIC0.76□□□□□ -2.29
Cldn3Q9Z0G9 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Cldn3Q9Z0G9 Gm23735-201ENSMUST00000082551 134 ntBASIC0.76□□□□□ -2.29
Cldn3Q9Z0G9 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.76□□□□□ -2.29
Cldn3Q9Z0G9 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
Cldn3Q9Z0G9 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.75□□□□□ -2.29
Cldn3Q9Z0G9 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.75□□□□□ -2.29
Cldn3Q9Z0G9 Gm25184-201ENSMUST00000157753 163 ntBASIC0.75□□□□□ -2.29
Cldn3Q9Z0G9 Gm44409-201ENSMUST00000198810 166 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 137.9 ms