Protein–RNA interactions for Protein: Q9JKU8

Lmx1a, LIM homeobox transcription factor 1-alpha, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1aQ9JKU8 Mir6350-201ENSMUST00000183639 105 ntBASIC0.48□□□□□ -2.33
Lmx1aQ9JKU8 Mir7077-201ENSMUST00000183991 57 ntBASIC0.48□□□□□ -2.33
Lmx1aQ9JKU8 Gm38183-201ENSMUST00000193189 205 ntBASIC0.48□□□□□ -2.33
Lmx1aQ9JKU8 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Lmx1aQ9JKU8 Gm23941-201ENSMUST00000101953 107 ntBASIC0.47□□□□□ -2.33
Lmx1aQ9JKU8 Gm24594-201ENSMUST00000122502 99 ntBASIC0.47□□□□□ -2.33
Lmx1aQ9JKU8 Gm24385-201ENSMUST00000122694 350 ntBASIC0.47□□□□□ -2.33
Lmx1aQ9JKU8 Gm23672-201ENSMUST00000157471 107 ntBASIC0.47□□□□□ -2.33
Lmx1aQ9JKU8 Gm26482-201ENSMUST00000158015 62 ntBASIC0.47□□□□□ -2.33
Lmx1aQ9JKU8 Gm22088-201ENSMUST00000158341 117 ntBASIC0.47□□□□□ -2.33
Lmx1aQ9JKU8 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.47□□□□□ -2.33
Lmx1aQ9JKU8 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
Lmx1aQ9JKU8 Gm29107-201ENSMUST00000190910 347 ntBASIC0.47□□□□□ -2.33
Lmx1aQ9JKU8 Gm36189-201ENSMUST00000204113 523 ntBASIC0.47□□□□□ -2.33
Lmx1aQ9JKU8 Gm44948-201ENSMUST00000209050 149 ntBASIC0.47□□□□□ -2.33
Lmx1aQ9JKU8 Gm25142-201ENSMUST00000082698 107 ntBASIC0.47□□□□□ -2.33
Lmx1aQ9JKU8 Mir324-201ENSMUST00000083600 89 ntBASIC0.47□□□□□ -2.33
Lmx1aQ9JKU8 Gm11904-201ENSMUST00000120562 248 ntBASIC0.46□□□□□ -2.34
Lmx1aQ9JKU8 Gm24392-201ENSMUST00000158136 103 ntBASIC0.46□□□□□ -2.34
Lmx1aQ9JKU8 Gm24678-201ENSMUST00000158756 104 ntBASIC0.46□□□□□ -2.34
Lmx1aQ9JKU8 Gm26287-201ENSMUST00000158887 81 ntBASIC0.46□□□□□ -2.34
Lmx1aQ9JKU8 Gm24667-201ENSMUST00000158938 103 ntBASIC0.46□□□□□ -2.34
Lmx1aQ9JKU8 Gm16404-201ENSMUST00000177739 468 ntBASIC0.46□□□□□ -2.34
Lmx1aQ9JKU8 Gm14598-201ENSMUST00000180109 468 ntBASIC0.46□□□□□ -2.34
Lmx1aQ9JKU8 Gm14625-201ENSMUST00000180231 468 ntBASIC0.46□□□□□ -2.34
Lmx1aQ9JKU8 Gm44828-201ENSMUST00000203745 106 ntBASIC0.46□□□□□ -2.34
Lmx1aQ9JKU8 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.46□□□□□ -2.34
Lmx1aQ9JKU8 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.46□□□□□ -2.34
Lmx1aQ9JKU8 Gm22302-201ENSMUST00000082657 106 ntBASIC0.46□□□□□ -2.34
Lmx1aQ9JKU8 Mir216a-201ENSMUST00000083605 72 ntBASIC0.46□□□□□ -2.34
Lmx1aQ9JKU8 Gm23345-201ENSMUST00000083817 150 ntBASIC0.46□□□□□ -2.34
Lmx1aQ9JKU8 Gm14884-201ENSMUST00000120456 196 ntBASIC0.45□□□□□ -2.34
Lmx1aQ9JKU8 Gm25024-201ENSMUST00000179667 104 ntBASIC0.45□□□□□ -2.34
Lmx1aQ9JKU8 Mir6364-201ENSMUST00000183396 86 ntBASIC0.45□□□□□ -2.34
Lmx1aQ9JKU8 Gm27521-201ENSMUST00000184022 64 ntBASIC0.45□□□□□ -2.34
Lmx1aQ9JKU8 Gm36956-201ENSMUST00000193830 214 ntBASIC0.45□□□□□ -2.34
Lmx1aQ9JKU8 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.45□□□□□ -2.34
Lmx1aQ9JKU8 Gm44563-201ENSMUST00000207958 178 ntBASIC0.45□□□□□ -2.34
Lmx1aQ9JKU8 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.45□□□□□ -2.34
Lmx1aQ9JKU8 Gm7240-201ENSMUST00000220769 664 ntBASIC0.45□□□□□ -2.34
Lmx1aQ9JKU8 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.45□□□□□ -2.34
Lmx1aQ9JKU8 Gm24453-201ENSMUST00000083346 76 ntBASIC0.45□□□□□ -2.34
Lmx1aQ9JKU8 Mir181a-2-201ENSMUST00000083489 76 ntBASIC0.45□□□□□ -2.34
Lmx1aQ9JKU8 Mir224-201ENSMUST00000083608 82 ntBASIC0.45□□□□□ -2.34
Lmx1aQ9JKU8 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.45□□□□□ -2.34
Lmx1aQ9JKU8 Gm22759-201ENSMUST00000102276 96 ntBASIC0.44□□□□□ -2.34
Lmx1aQ9JKU8 Gm22479-201ENSMUST00000122566 81 ntBASIC0.44□□□□□ -2.34
Lmx1aQ9JKU8 Gm22586-201ENSMUST00000157507 122 ntBASIC0.44□□□□□ -2.34
Lmx1aQ9JKU8 Gm26090-201ENSMUST00000157897 128 ntBASIC0.44□□□□□ -2.34
Lmx1aQ9JKU8 Gm23278-201ENSMUST00000157911 143 ntBASIC0.44□□□□□ -2.34
Lmx1aQ9JKU8 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC0.44□□□□□ -2.34
Lmx1aQ9JKU8 Gm44464-201ENSMUST00000198010 138 ntBASIC0.44□□□□□ -2.34
Lmx1aQ9JKU8 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC0.44□□□□□ -2.34
Lmx1aQ9JKU8 Gm24616-201ENSMUST00000083274 139 ntBASIC0.44□□□□□ -2.34
Lmx1aQ9JKU8 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.44□□□□□ -2.34
Lmx1aQ9JKU8 Snord33-201ENSMUST00000083694 84 ntBASIC0.44□□□□□ -2.34
Lmx1aQ9JKU8 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Lmx1aQ9JKU8 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.43□□□□□ -2.34
Lmx1aQ9JKU8 Gm24423-201ENSMUST00000101982 106 ntBASIC0.43□□□□□ -2.34
Lmx1aQ9JKU8 Gm22784-201ENSMUST00000104088 132 ntBASIC0.43□□□□□ -2.34
Lmx1aQ9JKU8 Gm25878-201ENSMUST00000104327 93 ntBASIC0.43□□□□□ -2.34
Lmx1aQ9JKU8 Gm12797-201ENSMUST00000118645 273 ntBASIC0.43□□□□□ -2.34
Lmx1aQ9JKU8 Gm14906-201ENSMUST00000119265 390 ntBASIC0.43□□□□□ -2.34
Lmx1aQ9JKU8 Gm23214-201ENSMUST00000122716 157 ntBASIC0.43□□□□□ -2.34
Lmx1aQ9JKU8 Gm22796-201ENSMUST00000157234 106 ntBASIC0.43□□□□□ -2.34
Lmx1aQ9JKU8 Gm25664-201ENSMUST00000157697 107 ntBASIC0.43□□□□□ -2.34
Lmx1aQ9JKU8 Snora20-201ENSMUST00000082703 128 ntBASIC0.43□□□□□ -2.34
Lmx1aQ9JKU8 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.43□□□□□ -2.34
Lmx1aQ9JKU8 Gm25512-201ENSMUST00000083863 107 ntBASIC0.43□□□□□ -2.34
Lmx1aQ9JKU8 Gm10222-201ENSMUST00000088336 294 ntBASIC0.43□□□□□ -2.34
Lmx1aQ9JKU8 Mir500-201ENSMUST00000093600 92 ntBASIC0.43□□□□□ -2.34
Lmx1aQ9JKU8 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
Lmx1aQ9JKU8 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.42□□□□□ -2.34
Lmx1aQ9JKU8 Mir466f-2-201ENSMUST00000104805 94 ntBASIC0.42□□□□□ -2.34
Lmx1aQ9JKU8 Mir3079-201ENSMUST00000175428 90 ntBASIC0.42□□□□□ -2.34
Lmx1aQ9JKU8 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
Lmx1aQ9JKU8 Mir6896-201ENSMUST00000198033 73 ntBASIC0.42□□□□□ -2.34
Lmx1aQ9JKU8 Gm44488-201ENSMUST00000199467 119 ntBASIC0.42□□□□□ -2.34
Lmx1aQ9JKU8 AC109214.2-201ENSMUST00000220089 358 ntBASIC0.42□□□□□ -2.34
Lmx1aQ9JKU8 Gm26447-201ENSMUST00000082448 129 ntBASIC0.42□□□□□ -2.34
Lmx1aQ9JKU8 Mir101a-201ENSMUST00000083517 83 ntBASIC0.42□□□□□ -2.34
Lmx1aQ9JKU8 Gm24171-201ENSMUST00000104126 131 ntBASIC0.41□□□□□ -2.34
Lmx1aQ9JKU8 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.41□□□□□ -2.34
Lmx1aQ9JKU8 Gm22387-201ENSMUST00000158191 131 ntBASIC0.41□□□□□ -2.34
Lmx1aQ9JKU8 Gm26116-201ENSMUST00000175600 77 ntBASIC0.41□□□□□ -2.34
Lmx1aQ9JKU8 Gm22887-201ENSMUST00000178586 107 ntBASIC0.41□□□□□ -2.34
Lmx1aQ9JKU8 Gm43432-201ENSMUST00000196352 121 ntBASIC0.41□□□□□ -2.34
Lmx1aQ9JKU8 Gm44977-201ENSMUST00000205283 420 ntBASIC0.41□□□□□ -2.34
Lmx1aQ9JKU8 mt-Tr-201ENSMUST00000082412 68 ntBASIC0.41□□□□□ -2.34
Lmx1aQ9JKU8 Gm25135-201ENSMUST00000082648 143 ntBASIC0.41□□□□□ -2.34
Lmx1aQ9JKU8 Gm25634-201ENSMUST00000082667 105 ntBASIC0.41□□□□□ -2.34
Lmx1aQ9JKU8 Gm25378-201ENSMUST00000104333 129 ntBASIC0.4□□□□□ -2.35
Lmx1aQ9JKU8 Snord89-201ENSMUST00000104516 110 ntBASIC0.4□□□□□ -2.35
Lmx1aQ9JKU8 Gm13246-201ENSMUST00000120994 315 ntBASIC0.4□□□□□ -2.35
Lmx1aQ9JKU8 Gm14671-201ENSMUST00000121790 262 ntBASIC0.4□□□□□ -2.35
Lmx1aQ9JKU8 Gm22216-201ENSMUST00000157557 114 ntBASIC0.4□□□□□ -2.35
Lmx1aQ9JKU8 Gm25424-201ENSMUST00000157612 58 ntBASIC0.4□□□□□ -2.35
Lmx1aQ9JKU8 Gm22522-201ENSMUST00000158271 151 ntBASIC0.4□□□□□ -2.35
Lmx1aQ9JKU8 Gm23002-201ENSMUST00000179221 107 ntBASIC0.4□□□□□ -2.35
Lmx1aQ9JKU8 Mir669a-7-201ENSMUST00000180364 87 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms