Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm37693-201ENSMUST00000194562 234 ntBASIC1□□□□□ -2.25
Scn5aQ9JJV9 Snord82-201ENSMUST00000082889 70 ntBASIC1□□□□□ -2.25
Scn5aQ9JJV9 Gm25627-201ENSMUST00000084003 153 ntBASIC1□□□□□ -2.25
Scn5aQ9JJV9 Mir490-201ENSMUST00000093567 84 ntBASIC1□□□□□ -2.25
Scn5aQ9JJV9 Gm27579-201ENSMUST00000158113 63 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm22944-201ENSMUST00000158662 133 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm25949-201ENSMUST00000175333 114 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm44853-201ENSMUST00000209070 250 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm24042-201ENSMUST00000083114 103 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm24929-201ENSMUST00000083403 139 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Snord35a-201ENSMUST00000083884 90 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm24640-201ENSMUST00000116949 126 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm22626-201ENSMUST00000116990 126 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm25985-201ENSMUST00000122677 107 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm22258-201ENSMUST00000177645 94 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm26032-201ENSMUST00000178535 94 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm25210-201ENSMUST00000178813 94 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm25157-201ENSMUST00000178914 94 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm22046-201ENSMUST00000179027 94 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm24761-201ENSMUST00000179589 127 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm22941-201ENSMUST00000179630 94 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm24488-201ENSMUST00000179934 127 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm25701-201ENSMUST00000179988 127 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm25471-201ENSMUST00000180126 94 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm26431-201ENSMUST00000180199 127 ntBASIC0.99□□□□□ -2.25
Scn5aQ9JJV9 Gm26415-201ENSMUST00000157673 292 ntBASIC0.98□□□□□ -2.25
Scn5aQ9JJV9 Gm28409-201ENSMUST00000187064 103 ntBASIC0.98□□□□□ -2.25
Scn5aQ9JJV9 Gm20118-201ENSMUST00000187207 162 ntBASIC0.98□□□□□ -2.25
Scn5aQ9JJV9 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.98□□□□□ -2.25
Scn5aQ9JJV9 Gm26204-201ENSMUST00000082906 107 ntBASIC0.98□□□□□ -2.25
Scn5aQ9JJV9 Gm23245-201ENSMUST00000083370 135 ntBASIC0.98□□□□□ -2.25
Scn5aQ9JJV9 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.98□□□□□ -2.25
Scn5aQ9JJV9 Gm26074-201ENSMUST00000104063 129 ntBASIC0.98□□□□□ -2.25
Scn5aQ9JJV9 Gm24171-201ENSMUST00000104126 131 ntBASIC0.98□□□□□ -2.25
Scn5aQ9JJV9 Gm13922-201ENSMUST00000119505 156 ntBASIC0.98□□□□□ -2.25
Scn5aQ9JJV9 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.98□□□□□ -2.25
Scn5aQ9JJV9 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.98□□□□□ -2.25
Scn5aQ9JJV9 Gm24415-201ENSMUST00000180218 107 ntBASIC0.98□□□□□ -2.25
Scn5aQ9JJV9 Gm24038-201ENSMUST00000082872 159 ntBASIC0.98□□□□□ -2.25
Scn5aQ9JJV9 Gm22973-201ENSMUST00000083298 191 ntBASIC0.98□□□□□ -2.25
Scn5aQ9JJV9 Mir27b-201ENSMUST00000083541 73 ntBASIC0.98□□□□□ -2.25
Scn5aQ9JJV9 Mir471-201ENSMUST00000093596 67 ntBASIC0.98□□□□□ -2.25
Scn5aQ9JJV9 Gm12449-201ENSMUST00000117572 234 ntBASIC0.97□□□□□ -2.25
Scn5aQ9JJV9 Gm25884-201ENSMUST00000157782 62 ntBASIC0.97□□□□□ -2.25
Scn5aQ9JJV9 Gm26360-201ENSMUST00000158872 103 ntBASIC0.97□□□□□ -2.25
Scn5aQ9JJV9 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.97□□□□□ -2.25
Scn5aQ9JJV9 Gm19790-201ENSMUST00000214414 251 ntBASIC0.97□□□□□ -2.25
Scn5aQ9JJV9 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.97□□□□□ -2.25
Scn5aQ9JJV9 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Scn5aQ9JJV9 Gm25538-201ENSMUST00000101943 107 ntBASIC0.96□□□□□ -2.26
Scn5aQ9JJV9 Gm24594-201ENSMUST00000122502 99 ntBASIC0.96□□□□□ -2.26
Scn5aQ9JJV9 Gm22164-201ENSMUST00000158413 106 ntBASIC0.96□□□□□ -2.26
Scn5aQ9JJV9 Gm22476-201ENSMUST00000158902 100 ntBASIC0.96□□□□□ -2.26
Scn5aQ9JJV9 Gm25241-201ENSMUST00000174909 84 ntBASIC0.96□□□□□ -2.26
Scn5aQ9JJV9 Gm26217-201ENSMUST00000175212 84 ntBASIC0.96□□□□□ -2.26
Scn5aQ9JJV9 Gm22887-201ENSMUST00000178586 107 ntBASIC0.96□□□□□ -2.26
Scn5aQ9JJV9 Gm22259-201ENSMUST00000178926 107 ntBASIC0.96□□□□□ -2.26
Scn5aQ9JJV9 Gm44464-201ENSMUST00000198010 138 ntBASIC0.96□□□□□ -2.26
Scn5aQ9JJV9 Gm44057-201ENSMUST00000204547 96 ntBASIC0.96□□□□□ -2.26
Scn5aQ9JJV9 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.96□□□□□ -2.26
Scn5aQ9JJV9 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.96□□□□□ -2.26
Scn5aQ9JJV9 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
Scn5aQ9JJV9 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.96□□□□□ -2.26
Scn5aQ9JJV9 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.96□□□□□ -2.26
Scn5aQ9JJV9 Gm26038-201ENSMUST00000158151 106 ntBASIC0.96□□□□□ -2.26
Scn5aQ9JJV9 Gm25769-201ENSMUST00000158569 127 ntBASIC0.96□□□□□ -2.26
Scn5aQ9JJV9 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.95□□□□□ -2.26
Scn5aQ9JJV9 Gm26026-201ENSMUST00000122726 123 ntBASIC0.95□□□□□ -2.26
Scn5aQ9JJV9 Gm23605-201ENSMUST00000157255 127 ntBASIC0.95□□□□□ -2.26
Scn5aQ9JJV9 Gm22403-201ENSMUST00000174919 84 ntBASIC0.95□□□□□ -2.26
Scn5aQ9JJV9 Gm25142-201ENSMUST00000082698 107 ntBASIC0.95□□□□□ -2.26
Scn5aQ9JJV9 Gm26123-201ENSMUST00000083363 135 ntBASIC0.95□□□□□ -2.26
Scn5aQ9JJV9 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.95□□□□□ -2.26
Scn5aQ9JJV9 Snord100-201ENSMUST00000116836 74 ntBASIC0.94□□□□□ -2.26
Scn5aQ9JJV9 Gm23655-201ENSMUST00000122627 105 ntBASIC0.94□□□□□ -2.26
Scn5aQ9JJV9 Gm42719-201ENSMUST00000197393 355 ntBASIC0.94□□□□□ -2.26
Scn5aQ9JJV9 Gm44301-201ENSMUST00000200362 143 ntBASIC0.94□□□□□ -2.26
Scn5aQ9JJV9 Gm22743-201ENSMUST00000083445 133 ntBASIC0.94□□□□□ -2.26
Scn5aQ9JJV9 Gm23347-201ENSMUST00000083823 82 ntBASIC0.94□□□□□ -2.26
Scn5aQ9JJV9 Gm24276-201ENSMUST00000102181 110 ntBASIC0.94□□□□□ -2.26
Scn5aQ9JJV9 Gm6952-201ENSMUST00000118629 159 ntBASIC0.94□□□□□ -2.26
Scn5aQ9JJV9 Gm23783-201ENSMUST00000157941 102 ntBASIC0.94□□□□□ -2.26
Scn5aQ9JJV9 Gm22612-201ENSMUST00000158293 101 ntBASIC0.94□□□□□ -2.26
Scn5aQ9JJV9 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.94□□□□□ -2.26
Scn5aQ9JJV9 AC122320.1-201ENSMUST00000227233 105 ntBASIC0.94□□□□□ -2.26
Scn5aQ9JJV9 Snord96a-201ENSMUST00000082791 81 ntBASIC0.94□□□□□ -2.26
Scn5aQ9JJV9 Gm25410-201ENSMUST00000083758 137 ntBASIC0.94□□□□□ -2.26
Scn5aQ9JJV9 Gm26213-201ENSMUST00000158582 110 ntBASIC0.93□□□□□ -2.26
Scn5aQ9JJV9 Mir6380-201ENSMUST00000184334 81 ntBASIC0.93□□□□□ -2.26
Scn5aQ9JJV9 Mir7116-201ENSMUST00000195956 70 ntBASIC0.93□□□□□ -2.26
Scn5aQ9JJV9 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.93□□□□□ -2.26
Scn5aQ9JJV9 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.93□□□□□ -2.26
Scn5aQ9JJV9 Mir146-201ENSMUST00000083667 65 ntBASIC0.93□□□□□ -2.26
Scn5aQ9JJV9 Gm22785-201ENSMUST00000104087 132 ntBASIC0.93□□□□□ -2.26
Scn5aQ9JJV9 Gm13246-201ENSMUST00000120994 315 ntBASIC0.93□□□□□ -2.26
Scn5aQ9JJV9 Gm25828-201ENSMUST00000157087 95 ntBASIC0.93□□□□□ -2.26
Scn5aQ9JJV9 Gm26363-201ENSMUST00000158866 83 ntBASIC0.93□□□□□ -2.26
Scn5aQ9JJV9 Gm25750-201ENSMUST00000175483 112 ntBASIC0.93□□□□□ -2.26
Scn5aQ9JJV9 Gm27420-201ENSMUST00000183823 79 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 140.1 ms