Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm37007-201ENSMUST00000194234 319 ntBASIC2.54□□□□□ -2
Trim39Q9ESN2 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.54□□□□□ -2
Trim39Q9ESN2 Gm44903-201ENSMUST00000206840 130 ntBASIC2.54□□□□□ -2
Trim39Q9ESN2 Gm23615-201ENSMUST00000082602 65 ntBASIC2.54□□□□□ -2
Trim39Q9ESN2 Gm22743-201ENSMUST00000083445 133 ntBASIC2.54□□□□□ -2
Trim39Q9ESN2 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
Trim39Q9ESN2 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
Trim39Q9ESN2 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.53□□□□□ -2
Trim39Q9ESN2 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.53□□□□□ -2
Trim39Q9ESN2 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trim39Q9ESN2 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.53□□□□□ -2
Trim39Q9ESN2 Gm26088-201ENSMUST00000157896 131 ntBASIC2.53□□□□□ -2
Trim39Q9ESN2 Gm25976-201ENSMUST00000158695 130 ntBASIC2.53□□□□□ -2
Trim39Q9ESN2 Gm24333-201ENSMUST00000175101 84 ntBASIC2.53□□□□□ -2
Trim39Q9ESN2 Gm24350-202ENSMUST00000198309 132 ntBASIC2.53□□□□□ -2
Trim39Q9ESN2 Gm43977-201ENSMUST00000203970 189 ntBASIC2.53□□□□□ -2
Trim39Q9ESN2 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trim39Q9ESN2 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trim39Q9ESN2 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Trim39Q9ESN2 Gm24049-201ENSMUST00000102409 100 ntBASIC2.52□□□□□ -2.01
Trim39Q9ESN2 Gm24376-201ENSMUST00000104399 127 ntBASIC2.52□□□□□ -2.01
Trim39Q9ESN2 Gm25270-201ENSMUST00000122606 138 ntBASIC2.52□□□□□ -2.01
Trim39Q9ESN2 Gm26090-201ENSMUST00000157897 128 ntBASIC2.52□□□□□ -2.01
Trim39Q9ESN2 Snord93-201ENSMUST00000175580 71 ntBASIC2.52□□□□□ -2.01
Trim39Q9ESN2 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.51□□□□□ -2.01
Trim39Q9ESN2 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Trim39Q9ESN2 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trim39Q9ESN2 Gm22545-201ENSMUST00000104350 132 ntBASIC2.51□□□□□ -2.01
Trim39Q9ESN2 Gm23911-201ENSMUST00000104596 134 ntBASIC2.51□□□□□ -2.01
Trim39Q9ESN2 Mir880-201ENSMUST00000104809 78 ntBASIC2.51□□□□□ -2.01
Trim39Q9ESN2 Gm24443-201ENSMUST00000157242 132 ntBASIC2.51□□□□□ -2.01
Trim39Q9ESN2 Gm23349-201ENSMUST00000158432 98 ntBASIC2.51□□□□□ -2.01
Trim39Q9ESN2 Gm25490-201ENSMUST00000158734 130 ntBASIC2.51□□□□□ -2.01
Trim39Q9ESN2 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Trim39Q9ESN2 Mir6388-201ENSMUST00000184417 75 ntBASIC2.51□□□□□ -2.01
Trim39Q9ESN2 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.51□□□□□ -2.01
Trim39Q9ESN2 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.51□□□□□ -2.01
Trim39Q9ESN2 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.51□□□□□ -2.01
Trim39Q9ESN2 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.51□□□□□ -2.01
Trim39Q9ESN2 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.5□□□□□ -2.01
Trim39Q9ESN2 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.5□□□□□ -2.01
Trim39Q9ESN2 Gm23033-201ENSMUST00000157996 134 ntBASIC2.5□□□□□ -2.01
Trim39Q9ESN2 Gm22330-201ENSMUST00000158068 115 ntBASIC2.5□□□□□ -2.01
Trim39Q9ESN2 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.5□□□□□ -2.01
Trim39Q9ESN2 Mir7047-201ENSMUST00000184595 64 ntBASIC2.5□□□□□ -2.01
Trim39Q9ESN2 Gm42795-201ENSMUST00000198847 76 ntBASIC2.5□□□□□ -2.01
Trim39Q9ESN2 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.5□□□□□ -2.01
Trim39Q9ESN2 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Trim39Q9ESN2 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Trim39Q9ESN2 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Trim39Q9ESN2 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.49□□□□□ -2.01
Trim39Q9ESN2 Gm11856-201ENSMUST00000118712 276 ntBASIC2.49□□□□□ -2.01
Trim39Q9ESN2 Gm23656-201ENSMUST00000122626 112 ntBASIC2.49□□□□□ -2.01
Trim39Q9ESN2 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.49□□□□□ -2.01
Trim39Q9ESN2 Gm22651-201ENSMUST00000157872 94 ntBASIC2.49□□□□□ -2.01
Trim39Q9ESN2 Gm24436-201ENSMUST00000157889 302 ntBASIC2.49□□□□□ -2.01
Trim39Q9ESN2 Gm23223-201ENSMUST00000158119 127 ntBASIC2.49□□□□□ -2.01
Trim39Q9ESN2 Gm22983-201ENSMUST00000158308 104 ntBASIC2.49□□□□□ -2.01
Trim39Q9ESN2 Gm23548-201ENSMUST00000158963 106 ntBASIC2.49□□□□□ -2.01
Trim39Q9ESN2 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.49□□□□□ -2.01
Trim39Q9ESN2 Gm7214-201ENSMUST00000222428 272 ntBASIC2.49□□□□□ -2.01
Trim39Q9ESN2 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.48□□□□□ -2.01
Trim39Q9ESN2 Gm25610-201ENSMUST00000104016 129 ntBASIC2.48□□□□□ -2.01
Trim39Q9ESN2 Gm25500-201ENSMUST00000104426 123 ntBASIC2.48□□□□□ -2.01
Trim39Q9ESN2 Gm24982-201ENSMUST00000104456 132 ntBASIC2.48□□□□□ -2.01
Trim39Q9ESN2 Gm12412-201ENSMUST00000121867 328 ntBASIC2.48□□□□□ -2.01
Trim39Q9ESN2 Gm25112-201ENSMUST00000122680 104 ntBASIC2.48□□□□□ -2.01
Trim39Q9ESN2 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.48□□□□□ -2.01
Trim39Q9ESN2 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Trim39Q9ESN2 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Trim39Q9ESN2 DQ267100-201ENSMUST00000122600 72 ntBASIC2.47□□□□□ -2.01
Trim39Q9ESN2 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.47□□□□□ -2.01
Trim39Q9ESN2 Gm22815-201ENSMUST00000157451 62 ntBASIC2.47□□□□□ -2.01
Trim39Q9ESN2 Gm24879-201ENSMUST00000158386 143 ntBASIC2.47□□□□□ -2.01
Trim39Q9ESN2 Gm23351-201ENSMUST00000158427 125 ntBASIC2.47□□□□□ -2.01
Trim39Q9ESN2 Mir451a-201ENSMUST00000093557 72 ntBASIC2.47□□□□□ -2.01
Trim39Q9ESN2 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Trim39Q9ESN2 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Trim39Q9ESN2 Gm45265-201ENSMUST00000210852 2497 ntBASIC2.47□□□□□ -2.01
Trim39Q9ESN2 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.46□□□□□ -2.02
Trim39Q9ESN2 Gm22782-201ENSMUST00000104082 132 ntBASIC2.46□□□□□ -2.02
Trim39Q9ESN2 Snora36b-201ENSMUST00000104383 132 ntBASIC2.46□□□□□ -2.02
Trim39Q9ESN2 Gm13433-201ENSMUST00000121701 240 ntBASIC2.46□□□□□ -2.02
Trim39Q9ESN2 Gm23788-201ENSMUST00000122535 106 ntBASIC2.46□□□□□ -2.02
Trim39Q9ESN2 Gm27786-201ENSMUST00000184337 70 ntBASIC2.46□□□□□ -2.02
Trim39Q9ESN2 Gm30534-201ENSMUST00000217928 207 ntBASIC2.46□□□□□ -2.02
Trim39Q9ESN2 AC166341.8-201ENSMUST00000221267 108 ntBASIC2.46□□□□□ -2.02
Trim39Q9ESN2 Snora3-201ENSMUST00000083082 132 ntBASIC2.46□□□□□ -2.02
Trim39Q9ESN2 Gm26109-201ENSMUST00000083970 70 ntBASIC2.46□□□□□ -2.02
Trim39Q9ESN2 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
Trim39Q9ESN2 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Trim39Q9ESN2 Gm26077-201ENSMUST00000104064 123 ntBASIC2.45□□□□□ -2.02
Trim39Q9ESN2 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Trim39Q9ESN2 Gm25280-201ENSMUST00000157269 101 ntBASIC2.45□□□□□ -2.02
Trim39Q9ESN2 Gm22706-201ENSMUST00000157907 112 ntBASIC2.45□□□□□ -2.02
Trim39Q9ESN2 Gm24681-201ENSMUST00000158760 107 ntBASIC2.45□□□□□ -2.02
Trim39Q9ESN2 Gm20477-201ENSMUST00000174028 280 ntBASIC2.45□□□□□ -2.02
Trim39Q9ESN2 Mir7242-201ENSMUST00000183710 79 ntBASIC2.45□□□□□ -2.02
Trim39Q9ESN2 Gm44807-201ENSMUST00000206115 154 ntBASIC2.45□□□□□ -2.02
Trim39Q9ESN2 Snord104-201ENSMUST00000083192 70 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 184.3 ms