Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Snord118-201ENSMUST00000082965 135 ntBASIC3.26□□□□□ -1.89
Ube3bQ9ES34 Gm26369-201ENSMUST00000157825 100 ntBASIC3.25□□□□□ -1.89
Ube3bQ9ES34 Gm22330-201ENSMUST00000158068 115 ntBASIC3.25□□□□□ -1.89
Ube3bQ9ES34 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.25□□□□□ -1.89
Ube3bQ9ES34 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.25□□□□□ -1.89
Ube3bQ9ES34 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.25□□□□□ -1.89
Ube3bQ9ES34 AC168056.1-201ENSMUST00000225270 180 ntBASIC3.25□□□□□ -1.89
Ube3bQ9ES34 Gm24038-201ENSMUST00000082872 159 ntBASIC3.25□□□□□ -1.89
Ube3bQ9ES34 Gm24805-201ENSMUST00000082931 104 ntBASIC3.25□□□□□ -1.89
Ube3bQ9ES34 Mir30c-2-201ENSMUST00000083633 84 ntBASIC3.25□□□□□ -1.89
Ube3bQ9ES34 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Ube3bQ9ES34 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ube3bQ9ES34 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ube3bQ9ES34 Gm6954-201ENSMUST00000117416 225 ntBASIC3.24□□□□□ -1.89
Ube3bQ9ES34 Gm25270-201ENSMUST00000122606 138 ntBASIC3.24□□□□□ -1.89
Ube3bQ9ES34 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ube3bQ9ES34 Gm24000-201ENSMUST00000158063 89 ntBASIC3.24□□□□□ -1.89
Ube3bQ9ES34 Gm26214-201ENSMUST00000158581 107 ntBASIC3.24□□□□□ -1.89
Ube3bQ9ES34 Gm24495-201ENSMUST00000178575 79 ntBASIC3.24□□□□□ -1.89
Ube3bQ9ES34 Gm22253-201ENSMUST00000179870 79 ntBASIC3.24□□□□□ -1.89
Ube3bQ9ES34 Mir6353-201ENSMUST00000183596 113 ntBASIC3.24□□□□□ -1.89
Ube3bQ9ES34 Gm27786-201ENSMUST00000184337 70 ntBASIC3.24□□□□□ -1.89
Ube3bQ9ES34 Gm24918-201ENSMUST00000083022 130 ntBASIC3.24□□□□□ -1.89
Ube3bQ9ES34 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ube3bQ9ES34 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ube3bQ9ES34 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ube3bQ9ES34 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
Ube3bQ9ES34 Gm23785-201ENSMUST00000116741 96 ntBASIC3.23□□□□□ -1.89
Ube3bQ9ES34 Mir466k-201ENSMUST00000116774 122 ntBASIC3.23□□□□□ -1.89
Ube3bQ9ES34 Gm26478-201ENSMUST00000122611 133 ntBASIC3.23□□□□□ -1.89
Ube3bQ9ES34 Gm17117-201ENSMUST00000163665 299 ntBASIC3.23□□□□□ -1.89
Ube3bQ9ES34 Gm20305-201ENSMUST00000193226 177 ntBASIC3.23□□□□□ -1.89
Ube3bQ9ES34 Gm44223-201ENSMUST00000204854 114 ntBASIC3.23□□□□□ -1.89
Ube3bQ9ES34 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC3.23□□□□□ -1.89
Ube3bQ9ES34 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Ube3bQ9ES34 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ube3bQ9ES34 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.23□□□□□ -1.89
Ube3bQ9ES34 Gm22658-201ENSMUST00000104196 155 ntBASIC3.22□□□□□ -1.89
Ube3bQ9ES34 Gm22999-201ENSMUST00000157082 88 ntBASIC3.22□□□□□ -1.89
Ube3bQ9ES34 Gm26277-201ENSMUST00000157097 152 ntBASIC3.22□□□□□ -1.89
Ube3bQ9ES34 Gm23190-201ENSMUST00000180307 64 ntBASIC3.22□□□□□ -1.89
Ube3bQ9ES34 Snora20-201ENSMUST00000082703 128 ntBASIC3.22□□□□□ -1.89
Ube3bQ9ES34 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Ube3bQ9ES34 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Ube3bQ9ES34 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ube3bQ9ES34 Gm24122-201ENSMUST00000104107 132 ntBASIC3.21□□□□□ -1.9
Ube3bQ9ES34 Gm11248-201ENSMUST00000119568 201 ntBASIC3.21□□□□□ -1.9
Ube3bQ9ES34 n-R5s189-201ENSMUST00000122675 114 ntBASIC3.21□□□□□ -1.9
Ube3bQ9ES34 Gm25153-201ENSMUST00000157118 156 ntBASIC3.21□□□□□ -1.9
Ube3bQ9ES34 Gm23983-201ENSMUST00000157142 114 ntBASIC3.21□□□□□ -1.9
Ube3bQ9ES34 Gm37807-201ENSMUST00000194310 190 ntBASIC3.21□□□□□ -1.9
Ube3bQ9ES34 Gm25855-201ENSMUST00000082787 72 ntBASIC3.21□□□□□ -1.9
Ube3bQ9ES34 Gm23376-201ENSMUST00000082938 160 ntBASIC3.21□□□□□ -1.9
Ube3bQ9ES34 Gm1980-201ENSMUST00000123131 2306 ntBASIC3.2□□□□□ -1.9
Ube3bQ9ES34 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ube3bQ9ES34 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.2□□□□□ -1.9
Ube3bQ9ES34 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ube3bQ9ES34 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ube3bQ9ES34 Snord53-201ENSMUST00000175146 78 ntBASIC3.2□□□□□ -1.9
Ube3bQ9ES34 Gm27698-201ENSMUST00000184060 249 ntBASIC3.2□□□□□ -1.9
Ube3bQ9ES34 Gm27686-201ENSMUST00000185123 91 ntBASIC3.2□□□□□ -1.9
Ube3bQ9ES34 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.2□□□□□ -1.9
Ube3bQ9ES34 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Ube3bQ9ES34 Gm25417-201ENSMUST00000104212 131 ntBASIC3.19□□□□□ -1.9
Ube3bQ9ES34 Gm24988-201ENSMUST00000104460 121 ntBASIC3.19□□□□□ -1.9
Ube3bQ9ES34 Gm26247-201ENSMUST00000116702 91 ntBASIC3.19□□□□□ -1.9
Ube3bQ9ES34 Gm24183-201ENSMUST00000122572 93 ntBASIC3.19□□□□□ -1.9
Ube3bQ9ES34 Gm23716-201ENSMUST00000157348 144 ntBASIC3.19□□□□□ -1.9
Ube3bQ9ES34 Gm25711-201ENSMUST00000158633 128 ntBASIC3.19□□□□□ -1.9
Ube3bQ9ES34 Gm22140-201ENSMUST00000158745 120 ntBASIC3.19□□□□□ -1.9
Ube3bQ9ES34 Gm20718-201ENSMUST00000176058 259 ntBASIC3.19□□□□□ -1.9
Ube3bQ9ES34 mt-Tn-201ENSMUST00000082399 71 ntBASIC3.19□□□□□ -1.9
Ube3bQ9ES34 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ube3bQ9ES34 Mir1197-201ENSMUST00000117037 120 ntBASIC3.18□□□□□ -1.9
Ube3bQ9ES34 Gm14884-201ENSMUST00000120456 196 ntBASIC3.18□□□□□ -1.9
Ube3bQ9ES34 Gm22205-201ENSMUST00000122655 71 ntBASIC3.18□□□□□ -1.9
Ube3bQ9ES34 Gm16355-201ENSMUST00000128606 231 ntBASIC3.18□□□□□ -1.9
Ube3bQ9ES34 Gm22539-201ENSMUST00000158167 117 ntBASIC3.18□□□□□ -1.9
Ube3bQ9ES34 Gm23409-201ENSMUST00000158516 237 ntBASIC3.18□□□□□ -1.9
Ube3bQ9ES34 Gm23181-201ENSMUST00000158685 110 ntBASIC3.18□□□□□ -1.9
Ube3bQ9ES34 Mir7013-201ENSMUST00000183540 72 ntBASIC3.18□□□□□ -1.9
Ube3bQ9ES34 Gm45452-201ENSMUST00000210905 177 ntBASIC3.18□□□□□ -1.9
Ube3bQ9ES34 Gm24162-201ENSMUST00000093665 102 ntBASIC3.18□□□□□ -1.9
Ube3bQ9ES34 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ube3bQ9ES34 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ube3bQ9ES34 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ube3bQ9ES34 Gm22731-201ENSMUST00000158086 94 ntBASIC3.17□□□□□ -1.9
Ube3bQ9ES34 Gm24922-201ENSMUST00000158511 102 ntBASIC3.17□□□□□ -1.9
Ube3bQ9ES34 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ube3bQ9ES34 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Ube3bQ9ES34 Gm23528-201ENSMUST00000104571 132 ntBASIC3.16□□□□□ -1.9
Ube3bQ9ES34 Gm26090-201ENSMUST00000157897 128 ntBASIC3.16□□□□□ -1.9
Ube3bQ9ES34 Gm16307-201ENSMUST00000161269 210 ntBASIC3.16□□□□□ -1.9
Ube3bQ9ES34 Gm42935-201ENSMUST00000202004 151 ntBASIC3.16□□□□□ -1.9
Ube3bQ9ES34 Gm44807-201ENSMUST00000206115 154 ntBASIC3.16□□□□□ -1.9
Ube3bQ9ES34 AC153966.1-201ENSMUST00000220106 3764 ntBASIC3.16□□□□□ -1.9
Ube3bQ9ES34 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Ube3bQ9ES34 Mir344c-201ENSMUST00000103919 92 ntBASIC3.15□□□□□ -1.91
Ube3bQ9ES34 Gm24736-201ENSMUST00000158862 130 ntBASIC3.15□□□□□ -1.91
Ube3bQ9ES34 Gm24082-201ENSMUST00000175175 83 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 132.7 ms