Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 BC022960-201ENSMUST00000119987 1815 ntBASIC2.6□□□□□ -1.99
Clp1Q99LI9 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Clp1Q99LI9 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.6□□□□□ -1.99
Clp1Q99LI9 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
Clp1Q99LI9 Gm24907-201ENSMUST00000116932 128 ntBASIC2.59□□□□□ -1.99
Clp1Q99LI9 Gm25113-201ENSMUST00000157185 143 ntBASIC2.59□□□□□ -1.99
Clp1Q99LI9 Gm25368-201ENSMUST00000158847 131 ntBASIC2.59□□□□□ -1.99
Clp1Q99LI9 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.59□□□□□ -1.99
Clp1Q99LI9 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Clp1Q99LI9 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.59□□□□□ -2
Clp1Q99LI9 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.58□□□□□ -2
Clp1Q99LI9 Gm25094-201ENSMUST00000103992 131 ntBASIC2.58□□□□□ -2
Clp1Q99LI9 Gm11856-201ENSMUST00000118712 276 ntBASIC2.58□□□□□ -2
Clp1Q99LI9 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.58□□□□□ -2
Clp1Q99LI9 AC147101.2-201ENSMUST00000219756 184 ntBASIC2.58□□□□□ -2
Clp1Q99LI9 Mir322-201ENSMUST00000083484 95 ntBASIC2.58□□□□□ -2
Clp1Q99LI9 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Clp1Q99LI9 Gm26345-201ENSMUST00000157534 120 ntBASIC2.57□□□□□ -2
Clp1Q99LI9 Gm25470-201ENSMUST00000175576 111 ntBASIC2.57□□□□□ -2
Clp1Q99LI9 Mir6406-201ENSMUST00000183592 120 ntBASIC2.57□□□□□ -2
Clp1Q99LI9 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.57□□□□□ -2
Clp1Q99LI9 Gm45471-201ENSMUST00000211270 281 ntBASIC2.57□□□□□ -2
Clp1Q99LI9 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Clp1Q99LI9 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Clp1Q99LI9 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Clp1Q99LI9 Gm12309-201ENSMUST00000119889 182 ntBASIC2.56□□□□□ -2
Clp1Q99LI9 Gm22554-201ENSMUST00000157798 147 ntBASIC2.56□□□□□ -2
Clp1Q99LI9 Gm22517-201ENSMUST00000158265 136 ntBASIC2.56□□□□□ -2
Clp1Q99LI9 Gm26406-201ENSMUST00000158503 124 ntBASIC2.56□□□□□ -2
Clp1Q99LI9 Gm23005-201ENSMUST00000158950 136 ntBASIC2.56□□□□□ -2
Clp1Q99LI9 Mir6928-201ENSMUST00000185166 70 ntBASIC2.56□□□□□ -2
Clp1Q99LI9 Mir369-201ENSMUST00000083627 79 ntBASIC2.56□□□□□ -2
Clp1Q99LI9 Gm26168-201ENSMUST00000083787 112 ntBASIC2.56□□□□□ -2
Clp1Q99LI9 Gm12941-201ENSMUST00000117934 220 ntBASIC2.55□□□□□ -2
Clp1Q99LI9 Gm23600-201ENSMUST00000157260 71 ntBASIC2.55□□□□□ -2
Clp1Q99LI9 Gm25750-201ENSMUST00000175483 112 ntBASIC2.55□□□□□ -2
Clp1Q99LI9 Gm3852-201ENSMUST00000182781 264 ntBASIC2.55□□□□□ -2
Clp1Q99LI9 Mir7683-201ENSMUST00000183842 61 ntBASIC2.55□□□□□ -2
Clp1Q99LI9 mt-Tf-201ENSMUST00000082387 68 ntBASIC2.55□□□□□ -2
Clp1Q99LI9 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.55□□□□□ -2
Clp1Q99LI9 Gm22003-201ENSMUST00000101885 107 ntBASIC2.54□□□□□ -2
Clp1Q99LI9 Mir547-201ENSMUST00000102051 78 ntBASIC2.54□□□□□ -2
Clp1Q99LI9 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.54□□□□□ -2
Clp1Q99LI9 Mir3094-201ENSMUST00000175121 64 ntBASIC2.54□□□□□ -2
Clp1Q99LI9 Gm22756-201ENSMUST00000180118 107 ntBASIC2.54□□□□□ -2
Clp1Q99LI9 Mir3569-201ENSMUST00000185080 58 ntBASIC2.54□□□□□ -2
Clp1Q99LI9 Gm37557-201ENSMUST00000191640 139 ntBASIC2.54□□□□□ -2
Clp1Q99LI9 Gm43512-201ENSMUST00000198495 176 ntBASIC2.54□□□□□ -2
Clp1Q99LI9 Mir497-201ENSMUST00000200557 84 ntBASIC2.54□□□□□ -2
Clp1Q99LI9 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.54□□□□□ -2
Clp1Q99LI9 Gm26054-201ENSMUST00000083037 107 ntBASIC2.54□□□□□ -2
Clp1Q99LI9 Mir221-201ENSMUST00000083488 95 ntBASIC2.54□□□□□ -2
Clp1Q99LI9 Gm24492-201ENSMUST00000083798 107 ntBASIC2.54□□□□□ -2
Clp1Q99LI9 Gm23950-201ENSMUST00000104026 129 ntBASIC2.53□□□□□ -2
Clp1Q99LI9 Gm19257-201ENSMUST00000186121 183 ntBASIC2.53□□□□□ -2
Clp1Q99LI9 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.53□□□□□ -2
Clp1Q99LI9 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Clp1Q99LI9 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
Clp1Q99LI9 Gm44560-201ENSMUST00000207816 3115 ntBASIC2.52□□□□□ -2.01
Clp1Q99LI9 Gm23907-201ENSMUST00000104595 189 ntBASIC2.52□□□□□ -2.01
Clp1Q99LI9 Gm26090-201ENSMUST00000157897 128 ntBASIC2.52□□□□□ -2.01
Clp1Q99LI9 Gm22803-201ENSMUST00000158049 283 ntBASIC2.52□□□□□ -2.01
Clp1Q99LI9 Mir3057-201ENSMUST00000175040 91 ntBASIC2.52□□□□□ -2.01
Clp1Q99LI9 Gm24366-201ENSMUST00000175383 86 ntBASIC2.52□□□□□ -2.01
Clp1Q99LI9 Mir8103-201ENSMUST00000183945 107 ntBASIC2.52□□□□□ -2.01
Clp1Q99LI9 Mir6997-201ENSMUST00000184313 71 ntBASIC2.52□□□□□ -2.01
Clp1Q99LI9 Mir7026-201ENSMUST00000184384 67 ntBASIC2.52□□□□□ -2.01
Clp1Q99LI9 Gm16976-205ENSMUST00000227324 226 ntBASIC2.52□□□□□ -2.01
Clp1Q99LI9 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Clp1Q99LI9 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.51□□□□□ -2.01
Clp1Q99LI9 Gm25091-201ENSMUST00000103997 71 ntBASIC2.51□□□□□ -2.01
Clp1Q99LI9 Gm22416-201ENSMUST00000158590 88 ntBASIC2.51□□□□□ -2.01
Clp1Q99LI9 Gm23208-201ENSMUST00000158666 127 ntBASIC2.51□□□□□ -2.01
Clp1Q99LI9 Gm25119-201ENSMUST00000158815 88 ntBASIC2.51□□□□□ -2.01
Clp1Q99LI9 Gm43865-201ENSMUST00000204721 127 ntBASIC2.51□□□□□ -2.01
Clp1Q99LI9 Gm24044-201ENSMUST00000083107 156 ntBASIC2.51□□□□□ -2.01
Clp1Q99LI9 Gm22884-201ENSMUST00000083127 140 ntBASIC2.51□□□□□ -2.01
Clp1Q99LI9 Gm25987-201ENSMUST00000083234 107 ntBASIC2.51□□□□□ -2.01
Clp1Q99LI9 Gm24523-201ENSMUST00000083965 132 ntBASIC2.51□□□□□ -2.01
Clp1Q99LI9 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Clp1Q99LI9 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Clp1Q99LI9 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Clp1Q99LI9 Gm25377-201ENSMUST00000104334 129 ntBASIC2.5□□□□□ -2.01
Clp1Q99LI9 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.5□□□□□ -2.01
Clp1Q99LI9 Gm24894-201ENSMUST00000122744 118 ntBASIC2.5□□□□□ -2.01
Clp1Q99LI9 Gm22213-201ENSMUST00000157564 119 ntBASIC2.5□□□□□ -2.01
Clp1Q99LI9 Gm23996-201ENSMUST00000158062 131 ntBASIC2.5□□□□□ -2.01
Clp1Q99LI9 Gm26213-201ENSMUST00000158582 110 ntBASIC2.5□□□□□ -2.01
Clp1Q99LI9 Gm22665-201ENSMUST00000158720 275 ntBASIC2.5□□□□□ -2.01
Clp1Q99LI9 Gm25646-201ENSMUST00000178527 79 ntBASIC2.5□□□□□ -2.01
Clp1Q99LI9 Mir6377-201ENSMUST00000183760 114 ntBASIC2.5□□□□□ -2.01
Clp1Q99LI9 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Clp1Q99LI9 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.5□□□□□ -2.01
Clp1Q99LI9 Mir466-201ENSMUST00000093591 73 ntBASIC2.5□□□□□ -2.01
Clp1Q99LI9 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Clp1Q99LI9 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.5□□□□□ -2.01
Clp1Q99LI9 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Clp1Q99LI9 Gm26077-201ENSMUST00000104064 123 ntBASIC2.49□□□□□ -2.01
Clp1Q99LI9 Gm24234-201ENSMUST00000104316 107 ntBASIC2.49□□□□□ -2.01
Clp1Q99LI9 Gm25753-201ENSMUST00000116792 121 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms