Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm27979-201ENSMUST00000185126 56 ntBASIC2.1□□□□□ -2.07
Ndc1Q8VCB1 Mir6928-201ENSMUST00000185166 70 ntBASIC2.1□□□□□ -2.07
Ndc1Q8VCB1 Gm22509-201ENSMUST00000082775 107 ntBASIC2.1□□□□□ -2.07
Ndc1Q8VCB1 Gm24412-201ENSMUST00000083426 109 ntBASIC2.1□□□□□ -2.07
Ndc1Q8VCB1 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
Ndc1Q8VCB1 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.09□□□□□ -2.07
Ndc1Q8VCB1 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Ndc1Q8VCB1 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.09□□□□□ -2.07
Ndc1Q8VCB1 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.09□□□□□ -2.07
Ndc1Q8VCB1 Gm24250-201ENSMUST00000157320 135 ntBASIC2.09□□□□□ -2.07
Ndc1Q8VCB1 Gm22083-201ENSMUST00000157586 102 ntBASIC2.09□□□□□ -2.07
Ndc1Q8VCB1 Gm23033-201ENSMUST00000157996 134 ntBASIC2.09□□□□□ -2.07
Ndc1Q8VCB1 Gm23770-201ENSMUST00000178009 108 ntBASIC2.09□□□□□ -2.07
Ndc1Q8VCB1 Gm22832-201ENSMUST00000178022 108 ntBASIC2.09□□□□□ -2.07
Ndc1Q8VCB1 Gm23863-201ENSMUST00000178265 108 ntBASIC2.09□□□□□ -2.07
Ndc1Q8VCB1 Gm24828-201ENSMUST00000178507 108 ntBASIC2.09□□□□□ -2.07
Ndc1Q8VCB1 Gm23052-201ENSMUST00000178633 108 ntBASIC2.09□□□□□ -2.07
Ndc1Q8VCB1 Gm25729-201ENSMUST00000179050 108 ntBASIC2.09□□□□□ -2.07
Ndc1Q8VCB1 Gm25359-201ENSMUST00000179315 108 ntBASIC2.09□□□□□ -2.07
Ndc1Q8VCB1 Gm22624-201ENSMUST00000179913 108 ntBASIC2.09□□□□□ -2.07
Ndc1Q8VCB1 Snord43-201ENSMUST00000199549 108 ntBASIC2.09□□□□□ -2.07
Ndc1Q8VCB1 Gm42844-201ENSMUST00000200355 112 ntBASIC2.09□□□□□ -2.07
Ndc1Q8VCB1 Mir151-201ENSMUST00000083678 68 ntBASIC2.09□□□□□ -2.07
Ndc1Q8VCB1 Gm26168-201ENSMUST00000083787 112 ntBASIC2.09□□□□□ -2.07
Ndc1Q8VCB1 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
Ndc1Q8VCB1 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.08
Ndc1Q8VCB1 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Ndc1Q8VCB1 Gm11856-201ENSMUST00000118712 276 ntBASIC2.08□□□□□ -2.08
Ndc1Q8VCB1 Gm24769-201ENSMUST00000158506 129 ntBASIC2.08□□□□□ -2.08
Ndc1Q8VCB1 Mir3086-201ENSMUST00000175072 87 ntBASIC2.08□□□□□ -2.08
Ndc1Q8VCB1 Gm25994-201ENSMUST00000175392 101 ntBASIC2.08□□□□□ -2.08
Ndc1Q8VCB1 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Ndc1Q8VCB1 Gm25820-202ENSMUST00000197479 128 ntBASIC2.08□□□□□ -2.08
Ndc1Q8VCB1 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.08□□□□□ -2.08
Ndc1Q8VCB1 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Ndc1Q8VCB1 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Ndc1Q8VCB1 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.07□□□□□ -2.08
Ndc1Q8VCB1 Gm25094-201ENSMUST00000103992 131 ntBASIC2.07□□□□□ -2.08
Ndc1Q8VCB1 Gm12941-201ENSMUST00000117934 220 ntBASIC2.07□□□□□ -2.08
Ndc1Q8VCB1 Gm24894-201ENSMUST00000122744 118 ntBASIC2.07□□□□□ -2.08
Ndc1Q8VCB1 Gm26345-201ENSMUST00000157534 120 ntBASIC2.07□□□□□ -2.08
Ndc1Q8VCB1 Gm22159-201ENSMUST00000158412 130 ntBASIC2.07□□□□□ -2.08
Ndc1Q8VCB1 Gm22070-201ENSMUST00000178475 107 ntBASIC2.07□□□□□ -2.08
Ndc1Q8VCB1 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.07□□□□□ -2.08
Ndc1Q8VCB1 mt-Tf-201ENSMUST00000082387 68 ntBASIC2.07□□□□□ -2.08
Ndc1Q8VCB1 Snora20-201ENSMUST00000082703 128 ntBASIC2.07□□□□□ -2.08
Ndc1Q8VCB1 Gm24661-201ENSMUST00000083205 104 ntBASIC2.07□□□□□ -2.08
Ndc1Q8VCB1 Mir466-201ENSMUST00000093591 73 ntBASIC2.07□□□□□ -2.08
Ndc1Q8VCB1 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.07□□□□□ -2.08
Ndc1Q8VCB1 Mir547-201ENSMUST00000102051 78 ntBASIC2.06□□□□□ -2.08
Ndc1Q8VCB1 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Ndc1Q8VCB1 Gm26076-201ENSMUST00000104065 105 ntBASIC2.06□□□□□ -2.08
Ndc1Q8VCB1 Gm23907-201ENSMUST00000104595 189 ntBASIC2.06□□□□□ -2.08
Ndc1Q8VCB1 Mir1949-201ENSMUST00000157434 141 ntBASIC2.06□□□□□ -2.08
Ndc1Q8VCB1 Gm22332-201ENSMUST00000158072 126 ntBASIC2.06□□□□□ -2.08
Ndc1Q8VCB1 Gm16561-201ENSMUST00000163001 192 ntBASIC2.06□□□□□ -2.08
Ndc1Q8VCB1 Mir3094-201ENSMUST00000175121 64 ntBASIC2.06□□□□□ -2.08
Ndc1Q8VCB1 Gm25646-201ENSMUST00000178527 79 ntBASIC2.06□□□□□ -2.08
Ndc1Q8VCB1 Gm25796-201ENSMUST00000082645 163 ntBASIC2.06□□□□□ -2.08
Ndc1Q8VCB1 Mir322-201ENSMUST00000083484 95 ntBASIC2.06□□□□□ -2.08
Ndc1Q8VCB1 Mir423-201ENSMUST00000083584 109 ntBASIC2.06□□□□□ -2.08
Ndc1Q8VCB1 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Ndc1Q8VCB1 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.06□□□□□ -2.08
Ndc1Q8VCB1 Gm25091-201ENSMUST00000103997 71 ntBASIC2.05□□□□□ -2.08
Ndc1Q8VCB1 Mir880-201ENSMUST00000104809 78 ntBASIC2.05□□□□□ -2.08
Ndc1Q8VCB1 Gm16510-201ENSMUST00000153501 249 ntBASIC2.05□□□□□ -2.08
Ndc1Q8VCB1 Gm25368-201ENSMUST00000158847 131 ntBASIC2.05□□□□□ -2.08
Ndc1Q8VCB1 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.05□□□□□ -2.08
Ndc1Q8VCB1 Mir6419-201ENSMUST00000184784 113 ntBASIC2.05□□□□□ -2.08
Ndc1Q8VCB1 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.05□□□□□ -2.08
Ndc1Q8VCB1 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.05□□□□□ -2.08
Ndc1Q8VCB1 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.05□□□□□ -2.08
Ndc1Q8VCB1 Gm26081-201ENSMUST00000104068 132 ntBASIC2.04□□□□□ -2.08
Ndc1Q8VCB1 Gm25889-201ENSMUST00000157775 107 ntBASIC2.04□□□□□ -2.08
Ndc1Q8VCB1 Gm24900-201ENSMUST00000158128 134 ntBASIC2.04□□□□□ -2.08
Ndc1Q8VCB1 Gm27446-201ENSMUST00000183963 89 ntBASIC2.04□□□□□ -2.08
Ndc1Q8VCB1 Gm16976-205ENSMUST00000227324 226 ntBASIC2.04□□□□□ -2.08
Ndc1Q8VCB1 Mir222-201ENSMUST00000083537 79 ntBASIC2.04□□□□□ -2.08
Ndc1Q8VCB1 Mir107-201ENSMUST00000083660 87 ntBASIC2.04□□□□□ -2.08
Ndc1Q8VCB1 Gm25684-201ENSMUST00000083941 107 ntBASIC2.04□□□□□ -2.08
Ndc1Q8VCB1 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.04□□□□□ -2.08
Ndc1Q8VCB1 Gm26077-201ENSMUST00000104064 123 ntBASIC2.03□□□□□ -2.08
Ndc1Q8VCB1 Gm12309-201ENSMUST00000119889 182 ntBASIC2.03□□□□□ -2.08
Ndc1Q8VCB1 Gm23996-201ENSMUST00000158062 131 ntBASIC2.03□□□□□ -2.08
Ndc1Q8VCB1 Snord87-201ENSMUST00000175437 87 ntBASIC2.03□□□□□ -2.08
Ndc1Q8VCB1 Gm25750-201ENSMUST00000175483 112 ntBASIC2.03□□□□□ -2.08
Ndc1Q8VCB1 Mir6997-201ENSMUST00000184313 71 ntBASIC2.03□□□□□ -2.08
Ndc1Q8VCB1 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.03□□□□□ -2.08
Ndc1Q8VCB1 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.03□□□□□ -2.08
Ndc1Q8VCB1 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
Ndc1Q8VCB1 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.03□□□□□ -2.08
Ndc1Q8VCB1 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
Ndc1Q8VCB1 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Ndc1Q8VCB1 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.02□□□□□ -2.09
Ndc1Q8VCB1 Gm22213-201ENSMUST00000157564 119 ntBASIC2.02□□□□□ -2.09
Ndc1Q8VCB1 Gm23644-201ENSMUST00000157856 77 ntBASIC2.02□□□□□ -2.09
Ndc1Q8VCB1 Gm23208-201ENSMUST00000158666 127 ntBASIC2.02□□□□□ -2.09
Ndc1Q8VCB1 Gm25444-201ENSMUST00000158999 113 ntBASIC2.02□□□□□ -2.09
Ndc1Q8VCB1 Gm24366-201ENSMUST00000175383 86 ntBASIC2.02□□□□□ -2.09
Ndc1Q8VCB1 Gm8034-201ENSMUST00000178853 132 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 154.9 ms