Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Mir7039-201ENSMUST00000183852 85 ntBASIC2.22□□□□□ -2.05
Ccdc9Q8VC31 Gm27979-201ENSMUST00000185126 56 ntBASIC2.22□□□□□ -2.05
Ccdc9Q8VC31 Gm21064-202ENSMUST00000190583 278 ntBASIC2.22□□□□□ -2.05
Ccdc9Q8VC31 Gm44326-201ENSMUST00000198226 101 ntBASIC2.22□□□□□ -2.05
Ccdc9Q8VC31 Gm22251-201ENSMUST00000083216 107 ntBASIC2.22□□□□□ -2.05
Ccdc9Q8VC31 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.22□□□□□ -2.05
Ccdc9Q8VC31 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.22□□□□□ -2.05
Ccdc9Q8VC31 Gm23011-201ENSMUST00000104148 132 ntBASIC2.21□□□□□ -2.06
Ccdc9Q8VC31 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.21□□□□□ -2.06
Ccdc9Q8VC31 Gm22159-201ENSMUST00000158412 130 ntBASIC2.21□□□□□ -2.06
Ccdc9Q8VC31 Mir6351-201ENSMUST00000183826 99 ntBASIC2.21□□□□□ -2.06
Ccdc9Q8VC31 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.21□□□□□ -2.06
Ccdc9Q8VC31 Gm44564-201ENSMUST00000207985 180 ntBASIC2.21□□□□□ -2.06
Ccdc9Q8VC31 Gm26493-201ENSMUST00000083155 136 ntBASIC2.21□□□□□ -2.06
Ccdc9Q8VC31 Gm23246-201ENSMUST00000083371 67 ntBASIC2.21□□□□□ -2.06
Ccdc9Q8VC31 Gm26168-201ENSMUST00000083787 112 ntBASIC2.21□□□□□ -2.06
Ccdc9Q8VC31 Gm26051-201ENSMUST00000104642 93 ntBASIC2.2□□□□□ -2.06
Ccdc9Q8VC31 Mir344e-201ENSMUST00000104677 66 ntBASIC2.2□□□□□ -2.06
Ccdc9Q8VC31 Gm22679-201ENSMUST00000116975 100 ntBASIC2.2□□□□□ -2.06
Ccdc9Q8VC31 Gm23194-201ENSMUST00000158813 105 ntBASIC2.2□□□□□ -2.06
Ccdc9Q8VC31 Mir28b-201ENSMUST00000175399 80 ntBASIC2.2□□□□□ -2.06
Ccdc9Q8VC31 Gm28912-201ENSMUST00000189001 234 ntBASIC2.2□□□□□ -2.06
Ccdc9Q8VC31 Gm38364-201ENSMUST00000191814 179 ntBASIC2.2□□□□□ -2.06
Ccdc9Q8VC31 Gm44358-201ENSMUST00000196301 98 ntBASIC2.2□□□□□ -2.06
Ccdc9Q8VC31 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.2□□□□□ -2.06
Ccdc9Q8VC31 Gm25589-201ENSMUST00000082502 166 ntBASIC2.2□□□□□ -2.06
Ccdc9Q8VC31 Gm25130-201ENSMUST00000082650 156 ntBASIC2.2□□□□□ -2.06
Ccdc9Q8VC31 Gm23244-201ENSMUST00000083375 92 ntBASIC2.2□□□□□ -2.06
Ccdc9Q8VC31 Mir19b-2-201ENSMUST00000083539 84 ntBASIC2.2□□□□□ -2.06
Ccdc9Q8VC31 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Ccdc9Q8VC31 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Ccdc9Q8VC31 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Ccdc9Q8VC31 Gm23381-201ENSMUST00000157676 94 ntBASIC2.19□□□□□ -2.06
Ccdc9Q8VC31 Gm25882-201ENSMUST00000157784 85 ntBASIC2.19□□□□□ -2.06
Ccdc9Q8VC31 Gm25012-201ENSMUST00000158396 164 ntBASIC2.19□□□□□ -2.06
Ccdc9Q8VC31 Mir3086-201ENSMUST00000175072 87 ntBASIC2.19□□□□□ -2.06
Ccdc9Q8VC31 Mir6997-201ENSMUST00000184313 71 ntBASIC2.19□□□□□ -2.06
Ccdc9Q8VC31 Gm42719-201ENSMUST00000197393 355 ntBASIC2.19□□□□□ -2.06
Ccdc9Q8VC31 Gm44976-201ENSMUST00000205543 261 ntBASIC2.19□□□□□ -2.06
Ccdc9Q8VC31 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.19□□□□□ -2.06
Ccdc9Q8VC31 Gm22738-201ENSMUST00000083440 147 ntBASIC2.19□□□□□ -2.06
Ccdc9Q8VC31 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Ccdc9Q8VC31 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Ccdc9Q8VC31 Gm22193-201ENSMUST00000116868 76 ntBASIC2.18□□□□□ -2.06
Ccdc9Q8VC31 Gm25059-201ENSMUST00000157367 117 ntBASIC2.18□□□□□ -2.06
Ccdc9Q8VC31 Gm24277-201ENSMUST00000158661 104 ntBASIC2.18□□□□□ -2.06
Ccdc9Q8VC31 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Ccdc9Q8VC31 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.18□□□□□ -2.06
Ccdc9Q8VC31 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.18□□□□□ -2.06
Ccdc9Q8VC31 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.18□□□□□ -2.06
Ccdc9Q8VC31 Mir201-201ENSMUST00000083470 66 ntBASIC2.18□□□□□ -2.06
Ccdc9Q8VC31 Gm25992-201ENSMUST00000102437 109 ntBASIC2.17□□□□□ -2.06
Ccdc9Q8VC31 Gm44489-201ENSMUST00000104619 97 ntBASIC2.17□□□□□ -2.06
Ccdc9Q8VC31 Snord100-201ENSMUST00000116836 74 ntBASIC2.17□□□□□ -2.06
Ccdc9Q8VC31 Gm23548-201ENSMUST00000158963 106 ntBASIC2.17□□□□□ -2.06
Ccdc9Q8VC31 Gm20438-201ENSMUST00000174441 329 ntBASIC2.17□□□□□ -2.06
Ccdc9Q8VC31 Gm22510-201ENSMUST00000179304 79 ntBASIC2.17□□□□□ -2.06
Ccdc9Q8VC31 Gm26336-201ENSMUST00000179449 79 ntBASIC2.17□□□□□ -2.06
Ccdc9Q8VC31 Gm26390-201ENSMUST00000179628 79 ntBASIC2.17□□□□□ -2.06
Ccdc9Q8VC31 Gm27878-201ENSMUST00000184000 106 ntBASIC2.17□□□□□ -2.06
Ccdc9Q8VC31 Gm27792-201ENSMUST00000184031 115 ntBASIC2.17□□□□□ -2.06
Ccdc9Q8VC31 Mir7017-201ENSMUST00000184894 62 ntBASIC2.17□□□□□ -2.06
Ccdc9Q8VC31 Gm16976-205ENSMUST00000227324 226 ntBASIC2.17□□□□□ -2.06
Ccdc9Q8VC31 Mir322-201ENSMUST00000083484 95 ntBASIC2.17□□□□□ -2.06
Ccdc9Q8VC31 Mir29c-201ENSMUST00000083614 88 ntBASIC2.17□□□□□ -2.06
Ccdc9Q8VC31 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Ccdc9Q8VC31 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.16□□□□□ -2.06
Ccdc9Q8VC31 Gm22790-201ENSMUST00000157229 129 ntBASIC2.16□□□□□ -2.06
Ccdc9Q8VC31 Gm24246-201ENSMUST00000157315 132 ntBASIC2.16□□□□□ -2.06
Ccdc9Q8VC31 Gm22983-201ENSMUST00000158308 104 ntBASIC2.16□□□□□ -2.06
Ccdc9Q8VC31 Gm23181-201ENSMUST00000158685 110 ntBASIC2.16□□□□□ -2.06
Ccdc9Q8VC31 Gm27248-201ENSMUST00000184004 166 ntBASIC2.16□□□□□ -2.06
Ccdc9Q8VC31 Gm43206-201ENSMUST00000197990 114 ntBASIC2.16□□□□□ -2.06
Ccdc9Q8VC31 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.16□□□□□ -2.06
Ccdc9Q8VC31 Mir1291-201ENSMUST00000199842 117 ntBASIC2.16□□□□□ -2.06
Ccdc9Q8VC31 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Ccdc9Q8VC31 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.16□□□□□ -2.06
Ccdc9Q8VC31 Gm25851-201ENSMUST00000082794 107 ntBASIC2.16□□□□□ -2.06
Ccdc9Q8VC31 Snora34-201ENSMUST00000083402 138 ntBASIC2.16□□□□□ -2.06
Ccdc9Q8VC31 Gm24697-201ENSMUST00000083881 107 ntBASIC2.16□□□□□ -2.06
Ccdc9Q8VC31 Gm23951-201ENSMUST00000104029 132 ntBASIC2.15□□□□□ -2.07
Ccdc9Q8VC31 Gm26077-201ENSMUST00000104064 123 ntBASIC2.15□□□□□ -2.07
Ccdc9Q8VC31 Gm22031-201ENSMUST00000116945 126 ntBASIC2.15□□□□□ -2.07
Ccdc9Q8VC31 Gm24718-201ENSMUST00000157521 136 ntBASIC2.15□□□□□ -2.07
Ccdc9Q8VC31 Gm22800-201ENSMUST00000175627 94 ntBASIC2.15□□□□□ -2.07
Ccdc9Q8VC31 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.15□□□□□ -2.07
Ccdc9Q8VC31 Gm15289-201ENSMUST00000117793 244 ntBASIC2.14□□□□□ -2.07
Ccdc9Q8VC31 Gm12941-201ENSMUST00000117934 220 ntBASIC2.14□□□□□ -2.07
Ccdc9Q8VC31 Gm22082-201ENSMUST00000157587 161 ntBASIC2.14□□□□□ -2.07
Ccdc9Q8VC31 Gm43381-201ENSMUST00000198553 165 ntBASIC2.14□□□□□ -2.07
Ccdc9Q8VC31 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Ccdc9Q8VC31 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.14□□□□□ -2.07
Ccdc9Q8VC31 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.14□□□□□ -2.07
Ccdc9Q8VC31 mt-Tv-201ENSMUST00000082389 69 ntBASIC2.14□□□□□ -2.07
Ccdc9Q8VC31 Gm23509-201ENSMUST00000083080 160 ntBASIC2.14□□□□□ -2.07
Ccdc9Q8VC31 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.13□□□□□ -2.07
Ccdc9Q8VC31 Gm22071-201ENSMUST00000116857 83 ntBASIC2.13□□□□□ -2.07
Ccdc9Q8VC31 Gm14502-201ENSMUST00000118154 113 ntBASIC2.13□□□□□ -2.07
Ccdc9Q8VC31 Gm24262-201ENSMUST00000157431 144 ntBASIC2.13□□□□□ -2.07
Ccdc9Q8VC31 Gm26345-201ENSMUST00000157534 120 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 192.1 ms