Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm23170-201ENSMUST00000157158 106 ntBASIC1.92□□□□□ -2.1
Ccdc87Q8CDL9 U6.1-201ENSMUST00000157443 101 ntBASIC1.92□□□□□ -2.1
Ccdc87Q8CDL9 Gm22349-201ENSMUST00000157864 107 ntBASIC1.92□□□□□ -2.1
Ccdc87Q8CDL9 Gm25558-201ENSMUST00000158083 106 ntBASIC1.92□□□□□ -2.1
Ccdc87Q8CDL9 Gm26291-201ENSMUST00000158889 137 ntBASIC1.92□□□□□ -2.1
Ccdc87Q8CDL9 Gm38364-201ENSMUST00000191814 179 ntBASIC1.92□□□□□ -2.1
Ccdc87Q8CDL9 CT485607.2-201ENSMUST00000214650 91 ntBASIC1.92□□□□□ -2.1
Ccdc87Q8CDL9 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.92□□□□□ -2.1
Ccdc87Q8CDL9 Snord14a-201ENSMUST00000082807 87 ntBASIC1.92□□□□□ -2.1
Ccdc87Q8CDL9 Gm22743-201ENSMUST00000083445 133 ntBASIC1.92□□□□□ -2.1
Ccdc87Q8CDL9 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Ccdc87Q8CDL9 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Ccdc87Q8CDL9 Gm25828-201ENSMUST00000157087 95 ntBASIC1.91□□□□□ -2.1
Ccdc87Q8CDL9 Gm22967-201ENSMUST00000157956 239 ntBASIC1.91□□□□□ -2.1
Ccdc87Q8CDL9 Gm28409-201ENSMUST00000187064 103 ntBASIC1.91□□□□□ -2.1
Ccdc87Q8CDL9 Gm44384-201ENSMUST00000200208 114 ntBASIC1.91□□□□□ -2.1
Ccdc87Q8CDL9 Gm23722-201ENSMUST00000083002 130 ntBASIC1.91□□□□□ -2.1
Ccdc87Q8CDL9 Gm25136-201ENSMUST00000083253 115 ntBASIC1.91□□□□□ -2.1
Ccdc87Q8CDL9 Mir488-201ENSMUST00000093595 109 ntBASIC1.91□□□□□ -2.1
Ccdc87Q8CDL9 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.91□□□□□ -2.1
Ccdc87Q8CDL9 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Ccdc87Q8CDL9 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.91□□□□□ -2.1
Ccdc87Q8CDL9 Gm23967-201ENSMUST00000175062 78 ntBASIC1.9□□□□□ -2.11
Ccdc87Q8CDL9 Gm24572-201ENSMUST00000175505 88 ntBASIC1.9□□□□□ -2.11
Ccdc87Q8CDL9 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.9□□□□□ -2.11
Ccdc87Q8CDL9 Gm23239-201ENSMUST00000083006 181 ntBASIC1.9□□□□□ -2.11
Ccdc87Q8CDL9 Gm23651-201ENSMUST00000116755 120 ntBASIC1.89□□□□□ -2.11
Ccdc87Q8CDL9 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.89□□□□□ -2.11
Ccdc87Q8CDL9 Gm26049-201ENSMUST00000157313 108 ntBASIC1.89□□□□□ -2.11
Ccdc87Q8CDL9 Gm22384-201ENSMUST00000158187 104 ntBASIC1.89□□□□□ -2.11
Ccdc87Q8CDL9 Gm22139-201ENSMUST00000158747 105 ntBASIC1.89□□□□□ -2.11
Ccdc87Q8CDL9 Gm16546-201ENSMUST00000159442 355 ntBASIC1.89□□□□□ -2.11
Ccdc87Q8CDL9 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ccdc87Q8CDL9 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Ccdc87Q8CDL9 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.89□□□□□ -2.11
Ccdc87Q8CDL9 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC1.89□□□□□ -2.11
Ccdc87Q8CDL9 Gm22148-201ENSMUST00000104445 107 ntBASIC1.88□□□□□ -2.11
Ccdc87Q8CDL9 Gm22477-201ENSMUST00000122569 316 ntBASIC1.88□□□□□ -2.11
Ccdc87Q8CDL9 Gm22850-201ENSMUST00000157714 82 ntBASIC1.88□□□□□ -2.11
Ccdc87Q8CDL9 Gm24229-201ENSMUST00000158830 118 ntBASIC1.88□□□□□ -2.11
Ccdc87Q8CDL9 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.88□□□□□ -2.11
Ccdc87Q8CDL9 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ccdc87Q8CDL9 Mir669b-201ENSMUST00000102172 97 ntBASIC1.87□□□□□ -2.11
Ccdc87Q8CDL9 Gm22163-201ENSMUST00000158408 135 ntBASIC1.87□□□□□ -2.11
Ccdc87Q8CDL9 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.87□□□□□ -2.11
Ccdc87Q8CDL9 Gm27672-201ENSMUST00000183751 204 ntBASIC1.87□□□□□ -2.11
Ccdc87Q8CDL9 Mir7678-201ENSMUST00000185076 71 ntBASIC1.87□□□□□ -2.11
Ccdc87Q8CDL9 Gm29603-201ENSMUST00000186792 334 ntBASIC1.87□□□□□ -2.11
Ccdc87Q8CDL9 Gm22884-201ENSMUST00000083127 140 ntBASIC1.87□□□□□ -2.11
Ccdc87Q8CDL9 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Ccdc87Q8CDL9 Gm22373-201ENSMUST00000104584 89 ntBASIC1.86□□□□□ -2.11
Ccdc87Q8CDL9 Snord100-201ENSMUST00000116836 74 ntBASIC1.86□□□□□ -2.11
Ccdc87Q8CDL9 Gm22386-201ENSMUST00000158192 129 ntBASIC1.86□□□□□ -2.11
Ccdc87Q8CDL9 Gm22888-201ENSMUST00000158640 77 ntBASIC1.86□□□□□ -2.11
Ccdc87Q8CDL9 Gm23337-201ENSMUST00000158959 118 ntBASIC1.86□□□□□ -2.11
Ccdc87Q8CDL9 Gm25750-201ENSMUST00000175483 112 ntBASIC1.86□□□□□ -2.11
Ccdc87Q8CDL9 Gm22683-201ENSMUST00000082854 137 ntBASIC1.86□□□□□ -2.11
Ccdc87Q8CDL9 Mir466b-3-201ENSMUST00000103806 81 ntBASIC1.85□□□□□ -2.11
Ccdc87Q8CDL9 Gm25878-201ENSMUST00000104327 93 ntBASIC1.85□□□□□ -2.11
Ccdc87Q8CDL9 Gm25879-201ENSMUST00000104330 107 ntBASIC1.85□□□□□ -2.11
Ccdc87Q8CDL9 Gm22673-201ENSMUST00000104415 131 ntBASIC1.85□□□□□ -2.11
Ccdc87Q8CDL9 Mir3096-201ENSMUST00000116685 71 ntBASIC1.85□□□□□ -2.11
Ccdc87Q8CDL9 Gm13922-201ENSMUST00000119505 156 ntBASIC1.85□□□□□ -2.11
Ccdc87Q8CDL9 Gm14671-201ENSMUST00000121790 262 ntBASIC1.85□□□□□ -2.11
Ccdc87Q8CDL9 Gm22082-201ENSMUST00000157587 161 ntBASIC1.85□□□□□ -2.11
Ccdc87Q8CDL9 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.85□□□□□ -2.11
Ccdc87Q8CDL9 Gm25038-201ENSMUST00000082928 130 ntBASIC1.85□□□□□ -2.11
Ccdc87Q8CDL9 Gm10351-201ENSMUST00000087694 125 ntBASIC1.85□□□□□ -2.11
Ccdc87Q8CDL9 Gm23947-201ENSMUST00000093636 107 ntBASIC1.85□□□□□ -2.11
Ccdc87Q8CDL9 Gm25832-201ENSMUST00000104140 130 ntBASIC1.84□□□□□ -2.11
Ccdc87Q8CDL9 Mir880-201ENSMUST00000104809 78 ntBASIC1.84□□□□□ -2.11
Ccdc87Q8CDL9 Gm14709-201ENSMUST00000121225 304 ntBASIC1.84□□□□□ -2.11
Ccdc87Q8CDL9 Gm11334-201ENSMUST00000121969 156 ntBASIC1.84□□□□□ -2.11
Ccdc87Q8CDL9 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.84□□□□□ -2.11
Ccdc87Q8CDL9 Gm23996-201ENSMUST00000158062 131 ntBASIC1.84□□□□□ -2.11
Ccdc87Q8CDL9 Gm24000-201ENSMUST00000158063 89 ntBASIC1.84□□□□□ -2.11
Ccdc87Q8CDL9 Gm22387-201ENSMUST00000158191 131 ntBASIC1.84□□□□□ -2.11
Ccdc87Q8CDL9 Gm44481-201ENSMUST00000197288 84 ntBASIC1.84□□□□□ -2.11
Ccdc87Q8CDL9 Gm44339-201ENSMUST00000200598 84 ntBASIC1.84□□□□□ -2.11
Ccdc87Q8CDL9 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.84□□□□□ -2.11
Ccdc87Q8CDL9 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.84□□□□□ -2.11
Ccdc87Q8CDL9 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.84□□□□□ -2.12
Ccdc87Q8CDL9 Gm11856-201ENSMUST00000118712 276 ntBASIC1.83□□□□□ -2.12
Ccdc87Q8CDL9 Gm24559-201ENSMUST00000157519 121 ntBASIC1.83□□□□□ -2.12
Ccdc87Q8CDL9 Gm26360-201ENSMUST00000158872 103 ntBASIC1.83□□□□□ -2.12
Ccdc87Q8CDL9 Mir3061-201ENSMUST00000175129 91 ntBASIC1.83□□□□□ -2.12
Ccdc87Q8CDL9 Mir5104-201ENSMUST00000175319 94 ntBASIC1.83□□□□□ -2.12
Ccdc87Q8CDL9 Mir6352-201ENSMUST00000184495 116 ntBASIC1.83□□□□□ -2.12
Ccdc87Q8CDL9 Gm44464-201ENSMUST00000198010 138 ntBASIC1.83□□□□□ -2.12
Ccdc87Q8CDL9 Gm45544-201ENSMUST00000211130 88 ntBASIC1.83□□□□□ -2.12
Ccdc87Q8CDL9 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.83□□□□□ -2.12
Ccdc87Q8CDL9 Gm24410-201ENSMUST00000083433 107 ntBASIC1.83□□□□□ -2.12
Ccdc87Q8CDL9 Gm24523-201ENSMUST00000083965 132 ntBASIC1.83□□□□□ -2.12
Ccdc87Q8CDL9 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ccdc87Q8CDL9 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
Ccdc87Q8CDL9 Gm25496-201ENSMUST00000104430 120 ntBASIC1.82□□□□□ -2.12
Ccdc87Q8CDL9 Gm23320-201ENSMUST00000104462 127 ntBASIC1.82□□□□□ -2.12
Ccdc87Q8CDL9 Gm14567-201ENSMUST00000117155 174 ntBASIC1.82□□□□□ -2.12
Ccdc87Q8CDL9 Gm25882-201ENSMUST00000157784 85 ntBASIC1.82□□□□□ -2.12
Ccdc87Q8CDL9 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 156.9 ms