Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trim47Q8C0E3 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trim47Q8C0E3 Gm25526-201ENSMUST00000104332 132 ntBASIC3.1□□□□□ -1.91
Trim47Q8C0E3 Gm22677-201ENSMUST00000116977 108 ntBASIC3.1□□□□□ -1.91
Trim47Q8C0E3 Gm11333-201ENSMUST00000119479 148 ntBASIC3.1□□□□□ -1.91
Trim47Q8C0E3 Gm24681-201ENSMUST00000158760 107 ntBASIC3.1□□□□□ -1.91
Trim47Q8C0E3 Gm6788-201ENSMUST00000166459 270 ntBASIC3.1□□□□□ -1.91
Trim47Q8C0E3 AC126691.1-201ENSMUST00000226534 202 ntBASIC3.1□□□□□ -1.91
Trim47Q8C0E3 mt-Tc-201ENSMUST00000082400 66 ntBASIC3.1□□□□□ -1.91
Trim47Q8C0E3 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Trim47Q8C0E3 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.09□□□□□ -1.91
Trim47Q8C0E3 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.09□□□□□ -1.91
Trim47Q8C0E3 Gm26080-201ENSMUST00000104069 131 ntBASIC3.09□□□□□ -1.91
Trim47Q8C0E3 n-R5s26-201ENSMUST00000104601 122 ntBASIC3.09□□□□□ -1.91
Trim47Q8C0E3 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC3.09□□□□□ -1.91
Trim47Q8C0E3 Gm25476-201ENSMUST00000175125 185 ntBASIC3.09□□□□□ -1.91
Trim47Q8C0E3 Gm23190-201ENSMUST00000180307 64 ntBASIC3.09□□□□□ -1.91
Trim47Q8C0E3 Mir6237-201ENSMUST00000183808 91 ntBASIC3.09□□□□□ -1.91
Trim47Q8C0E3 AC122335.1-201ENSMUST00000217587 175 ntBASIC3.09□□□□□ -1.91
Trim47Q8C0E3 Gm24038-201ENSMUST00000082872 159 ntBASIC3.09□□□□□ -1.91
Trim47Q8C0E3 Gm25696-201ENSMUST00000082900 105 ntBASIC3.09□□□□□ -1.91
Trim47Q8C0E3 Gm24536-201ENSMUST00000083144 107 ntBASIC3.09□□□□□ -1.91
Trim47Q8C0E3 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Trim47Q8C0E3 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trim47Q8C0E3 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trim47Q8C0E3 Mir344c-201ENSMUST00000103919 92 ntBASIC3.08□□□□□ -1.92
Trim47Q8C0E3 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Trim47Q8C0E3 Gm25697-201ENSMUST00000082902 98 ntBASIC3.08□□□□□ -1.92
Trim47Q8C0E3 Snord118-201ENSMUST00000082965 135 ntBASIC3.08□□□□□ -1.92
Trim47Q8C0E3 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.08□□□□□ -1.92
Trim47Q8C0E3 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trim47Q8C0E3 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Trim47Q8C0E3 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Trim47Q8C0E3 Gm9009-201ENSMUST00000117321 326 ntBASIC3.07□□□□□ -1.92
Trim47Q8C0E3 Gm11248-201ENSMUST00000119568 201 ntBASIC3.07□□□□□ -1.92
Trim47Q8C0E3 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.07□□□□□ -1.92
Trim47Q8C0E3 Gm22082-201ENSMUST00000157587 161 ntBASIC3.07□□□□□ -1.92
Trim47Q8C0E3 Gm24345-201ENSMUST00000158706 124 ntBASIC3.07□□□□□ -1.92
Trim47Q8C0E3 Gm22095-201ENSMUST00000158984 150 ntBASIC3.07□□□□□ -1.92
Trim47Q8C0E3 Gm23963-201ENSMUST00000179603 77 ntBASIC3.07□□□□□ -1.92
Trim47Q8C0E3 Mir7242-201ENSMUST00000183710 79 ntBASIC3.07□□□□□ -1.92
Trim47Q8C0E3 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.07□□□□□ -1.92
Trim47Q8C0E3 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Trim47Q8C0E3 Gm44680-201ENSMUST00000208414 2910 ntBASIC3.06□□□□□ -1.92
Trim47Q8C0E3 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trim47Q8C0E3 Gm24122-201ENSMUST00000104107 132 ntBASIC3.06□□□□□ -1.92
Trim47Q8C0E3 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Trim47Q8C0E3 Gm24000-201ENSMUST00000158063 89 ntBASIC3.06□□□□□ -1.92
Trim47Q8C0E3 Gm23268-201ENSMUST00000175494 78 ntBASIC3.06□□□□□ -1.92
Trim47Q8C0E3 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.06□□□□□ -1.92
Trim47Q8C0E3 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.06□□□□□ -1.92
Trim47Q8C0E3 Gm34314-201ENSMUST00000203622 367 ntBASIC3.06□□□□□ -1.92
Trim47Q8C0E3 Gm44560-201ENSMUST00000207816 3115 ntBASIC3.06□□□□□ -1.92
Trim47Q8C0E3 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.06□□□□□ -1.92
Trim47Q8C0E3 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.06□□□□□ -1.92
Trim47Q8C0E3 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trim47Q8C0E3 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.05□□□□□ -1.92
Trim47Q8C0E3 Gm23128-201ENSMUST00000104257 132 ntBASIC3.05□□□□□ -1.92
Trim47Q8C0E3 Gm23983-201ENSMUST00000157142 114 ntBASIC3.05□□□□□ -1.92
Trim47Q8C0E3 Gm16584-201ENSMUST00000159267 189 ntBASIC3.05□□□□□ -1.92
Trim47Q8C0E3 Gm25707-201ENSMUST00000175120 96 ntBASIC3.05□□□□□ -1.92
Trim47Q8C0E3 Mir7068-201ENSMUST00000183439 74 ntBASIC3.05□□□□□ -1.92
Trim47Q8C0E3 Gm23128-202ENSMUST00000196578 133 ntBASIC3.05□□□□□ -1.92
Trim47Q8C0E3 Gm44478-201ENSMUST00000204875 114 ntBASIC3.05□□□□□ -1.92
Trim47Q8C0E3 AC168056.1-201ENSMUST00000225270 180 ntBASIC3.05□□□□□ -1.92
Trim47Q8C0E3 Gm26458-201ENSMUST00000082832 128 ntBASIC3.05□□□□□ -1.92
Trim47Q8C0E3 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trim47Q8C0E3 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trim47Q8C0E3 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trim47Q8C0E3 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim47Q8C0E3 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trim47Q8C0E3 Gm22048-201ENSMUST00000104721 89 ntBASIC3.04□□□□□ -1.92
Trim47Q8C0E3 Gm14843-201ENSMUST00000119596 212 ntBASIC3.04□□□□□ -1.92
Trim47Q8C0E3 Gm16111-201ENSMUST00000162128 285 ntBASIC3.04□□□□□ -1.92
Trim47Q8C0E3 Gm24495-201ENSMUST00000178575 79 ntBASIC3.04□□□□□ -1.92
Trim47Q8C0E3 Gm22253-201ENSMUST00000179870 79 ntBASIC3.04□□□□□ -1.92
Trim47Q8C0E3 Gm27975-201ENSMUST00000184400 101 ntBASIC3.04□□□□□ -1.92
Trim47Q8C0E3 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.04□□□□□ -1.92
Trim47Q8C0E3 Gm25854-201ENSMUST00000082792 72 ntBASIC3.04□□□□□ -1.92
Trim47Q8C0E3 AC124456.1-201ENSMUST00000217391 2597 ntBASIC3.03□□□□□ -1.92
Trim47Q8C0E3 Gm8260-201ENSMUST00000119230 353 ntBASIC3.03□□□□□ -1.92
Trim47Q8C0E3 Gm22664-201ENSMUST00000158719 105 ntBASIC3.03□□□□□ -1.92
Trim47Q8C0E3 Gm26073-201ENSMUST00000179906 127 ntBASIC3.03□□□□□ -1.92
Trim47Q8C0E3 Mir8090-201ENSMUST00000185078 136 ntBASIC3.03□□□□□ -1.92
Trim47Q8C0E3 Gm27686-201ENSMUST00000185123 91 ntBASIC3.03□□□□□ -1.92
Trim47Q8C0E3 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.03□□□□□ -1.92
Trim47Q8C0E3 AC159093.2-201ENSMUST00000227881 297 ntBASIC3.03□□□□□ -1.92
Trim47Q8C0E3 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.03□□□□□ -1.92
Trim47Q8C0E3 Snora20-201ENSMUST00000082703 128 ntBASIC3.03□□□□□ -1.92
Trim47Q8C0E3 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Trim47Q8C0E3 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim47Q8C0E3 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trim47Q8C0E3 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
Trim47Q8C0E3 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
Trim47Q8C0E3 Gm25542-201ENSMUST00000116889 94 ntBASIC3.02□□□□□ -1.93
Trim47Q8C0E3 Mir1197-201ENSMUST00000117037 120 ntBASIC3.02□□□□□ -1.93
Trim47Q8C0E3 n-R5s189-201ENSMUST00000122675 114 ntBASIC3.02□□□□□ -1.93
Trim47Q8C0E3 Gm22539-201ENSMUST00000158167 117 ntBASIC3.02□□□□□ -1.93
Trim47Q8C0E3 Gm25740-201ENSMUST00000180247 107 ntBASIC3.02□□□□□ -1.93
Trim47Q8C0E3 Gm44325-201ENSMUST00000196757 77 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 220.9 ms