Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gm24463-201ENSMUST00000178417 72 ntBASIC2.59□□□□□ -1.99
Trim6Q8BGE7 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.59□□□□□ -1.99
Trim6Q8BGE7 Gm8031-201ENSMUST00000213430 626 ntBASIC2.59□□□□□ -1.99
Trim6Q8BGE7 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.59□□□□□ -1.99
Trim6Q8BGE7 Gm30534-201ENSMUST00000217928 207 ntBASIC2.59□□□□□ -1.99
Trim6Q8BGE7 Gm6109-201ENSMUST00000223297 348 ntBASIC2.59□□□□□ -1.99
Trim6Q8BGE7 Gm25796-201ENSMUST00000082645 163 ntBASIC2.59□□□□□ -1.99
Trim6Q8BGE7 Gm25357-201ENSMUST00000082745 72 ntBASIC2.59□□□□□ -1.99
Trim6Q8BGE7 Snord104-201ENSMUST00000083192 70 ntBASIC2.59□□□□□ -1.99
Trim6Q8BGE7 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trim6Q8BGE7 Gm24280-201ENSMUST00000104237 134 ntBASIC2.58□□□□□ -2
Trim6Q8BGE7 Gm12412-201ENSMUST00000121867 328 ntBASIC2.58□□□□□ -2
Trim6Q8BGE7 Gm24238-201ENSMUST00000157792 98 ntBASIC2.58□□□□□ -2
Trim6Q8BGE7 Gm20409-201ENSMUST00000173457 130 ntBASIC2.58□□□□□ -2
Trim6Q8BGE7 Snora20-201ENSMUST00000082703 128 ntBASIC2.58□□□□□ -2
Trim6Q8BGE7 Gm24099-201ENSMUST00000083384 107 ntBASIC2.58□□□□□ -2
Trim6Q8BGE7 Mir429-201ENSMUST00000083493 83 ntBASIC2.58□□□□□ -2
Trim6Q8BGE7 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.58□□□□□ -2
Trim6Q8BGE7 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trim6Q8BGE7 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Trim6Q8BGE7 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.57□□□□□ -2
Trim6Q8BGE7 Gm25168-201ENSMUST00000104189 132 ntBASIC2.57□□□□□ -2
Trim6Q8BGE7 Gm22772-201ENSMUST00000104451 121 ntBASIC2.57□□□□□ -2
Trim6Q8BGE7 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trim6Q8BGE7 Gm23181-201ENSMUST00000158685 110 ntBASIC2.57□□□□□ -2
Trim6Q8BGE7 Gm25996-201ENSMUST00000175393 117 ntBASIC2.57□□□□□ -2
Trim6Q8BGE7 Mir6993-201ENSMUST00000184912 65 ntBASIC2.57□□□□□ -2
Trim6Q8BGE7 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trim6Q8BGE7 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.56□□□□□ -2
Trim6Q8BGE7 Gm22319-201ENSMUST00000157147 122 ntBASIC2.56□□□□□ -2
Trim6Q8BGE7 Gm24212-201ENSMUST00000158258 132 ntBASIC2.56□□□□□ -2
Trim6Q8BGE7 Gm23384-201ENSMUST00000158593 103 ntBASIC2.56□□□□□ -2
Trim6Q8BGE7 Gm26073-201ENSMUST00000179906 127 ntBASIC2.56□□□□□ -2
Trim6Q8BGE7 Gm25681-201ENSMUST00000083938 106 ntBASIC2.56□□□□□ -2
Trim6Q8BGE7 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.56□□□□□ -2
Trim6Q8BGE7 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC2.55□□□□□ -2
Trim6Q8BGE7 Gm26466-201ENSMUST00000179615 79 ntBASIC2.55□□□□□ -2
Trim6Q8BGE7 Gm3852-201ENSMUST00000182781 264 ntBASIC2.55□□□□□ -2
Trim6Q8BGE7 Gm44555-201ENSMUST00000209008 148 ntBASIC2.55□□□□□ -2
Trim6Q8BGE7 Gm45471-201ENSMUST00000211270 281 ntBASIC2.55□□□□□ -2
Trim6Q8BGE7 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trim6Q8BGE7 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.55□□□□□ -2
Trim6Q8BGE7 Mir490-201ENSMUST00000093567 84 ntBASIC2.55□□□□□ -2
Trim6Q8BGE7 Gm24049-201ENSMUST00000102409 100 ntBASIC2.54□□□□□ -2
Trim6Q8BGE7 Gm25376-201ENSMUST00000104340 133 ntBASIC2.54□□□□□ -2
Trim6Q8BGE7 Gm11598-201ENSMUST00000119257 357 ntBASIC2.54□□□□□ -2
Trim6Q8BGE7 Gm24627-201ENSMUST00000122764 138 ntBASIC2.54□□□□□ -2
Trim6Q8BGE7 Gm24947-201ENSMUST00000158334 110 ntBASIC2.54□□□□□ -2
Trim6Q8BGE7 Gm24771-201ENSMUST00000158508 137 ntBASIC2.54□□□□□ -2
Trim6Q8BGE7 Gm25490-201ENSMUST00000158734 130 ntBASIC2.54□□□□□ -2
Trim6Q8BGE7 Gm24656-201ENSMUST00000177548 132 ntBASIC2.54□□□□□ -2
Trim6Q8BGE7 Trbv7-201ENSMUST00000193339 402 ntBASIC2.54□□□□□ -2
Trim6Q8BGE7 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trim6Q8BGE7 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.54□□□□□ -2
Trim6Q8BGE7 Mir411-201ENSMUST00000083543 82 ntBASIC2.54□□□□□ -2
Trim6Q8BGE7 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.54□□□□□ -2
Trim6Q8BGE7 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.53□□□□□ -2
Trim6Q8BGE7 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trim6Q8BGE7 Snord78-201ENSMUST00000104032 66 ntBASIC2.53□□□□□ -2
Trim6Q8BGE7 Gm22679-201ENSMUST00000116975 100 ntBASIC2.53□□□□□ -2
Trim6Q8BGE7 Gm14947-201ENSMUST00000133704 303 ntBASIC2.53□□□□□ -2
Trim6Q8BGE7 Gm45268-201ENSMUST00000210046 370 ntBASIC2.53□□□□□ -2
Trim6Q8BGE7 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.53□□□□□ -2
Trim6Q8BGE7 Gm24313-201ENSMUST00000082561 133 ntBASIC2.53□□□□□ -2
Trim6Q8BGE7 Gm25855-201ENSMUST00000082787 72 ntBASIC2.53□□□□□ -2
Trim6Q8BGE7 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trim6Q8BGE7 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trim6Q8BGE7 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.52□□□□□ -2.01
Trim6Q8BGE7 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trim6Q8BGE7 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.52□□□□□ -2.01
Trim6Q8BGE7 Gm26280-201ENSMUST00000157096 101 ntBASIC2.52□□□□□ -2.01
Trim6Q8BGE7 Gm23986-201ENSMUST00000157144 63 ntBASIC2.52□□□□□ -2.01
Trim6Q8BGE7 Gm22083-201ENSMUST00000157586 102 ntBASIC2.52□□□□□ -2.01
Trim6Q8BGE7 Gm24816-201ENSMUST00000175311 151 ntBASIC2.52□□□□□ -2.01
Trim6Q8BGE7 Gm22069-201ENSMUST00000179911 107 ntBASIC2.52□□□□□ -2.01
Trim6Q8BGE7 Snora41-201ENSMUST00000082668 132 ntBASIC2.52□□□□□ -2.01
Trim6Q8BGE7 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim6Q8BGE7 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.52□□□□□ -2.01
Trim6Q8BGE7 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Trim6Q8BGE7 Gm25680-201ENSMUST00000116917 126 ntBASIC2.51□□□□□ -2.01
Trim6Q8BGE7 Gm22635-201ENSMUST00000116962 126 ntBASIC2.51□□□□□ -2.01
Trim6Q8BGE7 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.51□□□□□ -2.01
Trim6Q8BGE7 Gm22963-201ENSMUST00000157960 91 ntBASIC2.51□□□□□ -2.01
Trim6Q8BGE7 Gm24210-201ENSMUST00000158263 133 ntBASIC2.51□□□□□ -2.01
Trim6Q8BGE7 Gm26004-201ENSMUST00000158804 116 ntBASIC2.51□□□□□ -2.01
Trim6Q8BGE7 Traj61-201ENSMUST00000165025 72 ntBASIC2.51□□□□□ -2.01
Trim6Q8BGE7 Gm24333-201ENSMUST00000175101 84 ntBASIC2.51□□□□□ -2.01
Trim6Q8BGE7 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Trim6Q8BGE7 Mir6388-201ENSMUST00000184417 75 ntBASIC2.51□□□□□ -2.01
Trim6Q8BGE7 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.51□□□□□ -2.01
Trim6Q8BGE7 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.51□□□□□ -2.01
Trim6Q8BGE7 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trim6Q8BGE7 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Trim6Q8BGE7 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.5□□□□□ -2.01
Trim6Q8BGE7 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Trim6Q8BGE7 Mir682-201ENSMUST00000102281 96 ntBASIC2.5□□□□□ -2.01
Trim6Q8BGE7 Gm24670-201ENSMUST00000104154 132 ntBASIC2.5□□□□□ -2.01
Trim6Q8BGE7 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.5□□□□□ -2.01
Trim6Q8BGE7 Gm23656-201ENSMUST00000122626 112 ntBASIC2.5□□□□□ -2.01
Trim6Q8BGE7 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 112.8 ms