Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.22□□□□□ -2.05
Shkbp1Q6P7W2 Gm22950-201ENSMUST00000082776 107 ntBASIC2.22□□□□□ -2.05
Shkbp1Q6P7W2 Gm25627-201ENSMUST00000084003 153 ntBASIC2.22□□□□□ -2.05
Shkbp1Q6P7W2 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Shkbp1Q6P7W2 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.21□□□□□ -2.06
Shkbp1Q6P7W2 Gm24098-201ENSMUST00000102075 109 ntBASIC2.21□□□□□ -2.06
Shkbp1Q6P7W2 Gm25381-201ENSMUST00000102078 109 ntBASIC2.21□□□□□ -2.06
Shkbp1Q6P7W2 Gm22031-201ENSMUST00000116945 126 ntBASIC2.21□□□□□ -2.06
Shkbp1Q6P7W2 Gm25769-201ENSMUST00000158569 127 ntBASIC2.21□□□□□ -2.06
Shkbp1Q6P7W2 Gm8034-201ENSMUST00000178853 132 ntBASIC2.21□□□□□ -2.06
Shkbp1Q6P7W2 Gm27443-201ENSMUST00000184660 98 ntBASIC2.21□□□□□ -2.06
Shkbp1Q6P7W2 Mir7017-201ENSMUST00000184894 62 ntBASIC2.21□□□□□ -2.06
Shkbp1Q6P7W2 Gm43722-201ENSMUST00000196054 124 ntBASIC2.21□□□□□ -2.06
Shkbp1Q6P7W2 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC2.21□□□□□ -2.06
Shkbp1Q6P7W2 Mir29c-201ENSMUST00000083614 88 ntBASIC2.21□□□□□ -2.06
Shkbp1Q6P7W2 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Shkbp1Q6P7W2 Gm26421-201ENSMUST00000104279 132 ntBASIC2.2□□□□□ -2.06
Shkbp1Q6P7W2 Gm25878-201ENSMUST00000104327 93 ntBASIC2.2□□□□□ -2.06
Shkbp1Q6P7W2 Mir293-201ENSMUST00000104841 80 ntBASIC2.2□□□□□ -2.06
Shkbp1Q6P7W2 Gm23654-201ENSMUST00000116758 126 ntBASIC2.2□□□□□ -2.06
Shkbp1Q6P7W2 Gm22796-201ENSMUST00000157234 106 ntBASIC2.2□□□□□ -2.06
Shkbp1Q6P7W2 Gm22099-201ENSMUST00000157925 123 ntBASIC2.2□□□□□ -2.06
Shkbp1Q6P7W2 Gm23033-201ENSMUST00000157996 134 ntBASIC2.2□□□□□ -2.06
Shkbp1Q6P7W2 Gm25558-201ENSMUST00000158083 106 ntBASIC2.2□□□□□ -2.06
Shkbp1Q6P7W2 Mir3569-201ENSMUST00000185080 58 ntBASIC2.2□□□□□ -2.06
Shkbp1Q6P7W2 Mir3069-201ENSMUST00000198802 65 ntBASIC2.2□□□□□ -2.06
Shkbp1Q6P7W2 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC2.2□□□□□ -2.06
Shkbp1Q6P7W2 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.2□□□□□ -2.06
Shkbp1Q6P7W2 Gm22196-201ENSMUST00000116865 109 ntBASIC2.19□□□□□ -2.06
Shkbp1Q6P7W2 Gm26345-201ENSMUST00000157534 120 ntBASIC2.19□□□□□ -2.06
Shkbp1Q6P7W2 Gm23898-201ENSMUST00000158111 103 ntBASIC2.19□□□□□ -2.06
Shkbp1Q6P7W2 Mir669n-201ENSMUST00000158636 54 ntBASIC2.19□□□□□ -2.06
Shkbp1Q6P7W2 Gm26498-201ENSMUST00000177799 79 ntBASIC2.19□□□□□ -2.06
Shkbp1Q6P7W2 Gm26230-201ENSMUST00000180141 79 ntBASIC2.19□□□□□ -2.06
Shkbp1Q6P7W2 Gm23190-201ENSMUST00000180307 64 ntBASIC2.19□□□□□ -2.06
Shkbp1Q6P7W2 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.19□□□□□ -2.06
Shkbp1Q6P7W2 Gm44555-201ENSMUST00000209008 148 ntBASIC2.19□□□□□ -2.06
Shkbp1Q6P7W2 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.19□□□□□ -2.06
Shkbp1Q6P7W2 Gm26326-201ENSMUST00000083070 129 ntBASIC2.19□□□□□ -2.06
Shkbp1Q6P7W2 Gm22251-201ENSMUST00000083216 107 ntBASIC2.19□□□□□ -2.06
Shkbp1Q6P7W2 Mir423-201ENSMUST00000083584 109 ntBASIC2.19□□□□□ -2.06
Shkbp1Q6P7W2 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.19□□□□□ -2.06
Shkbp1Q6P7W2 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.19□□□□□ -2.06
Shkbp1Q6P7W2 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
Shkbp1Q6P7W2 Mir758-201ENSMUST00000103260 81 ntBASIC2.18□□□□□ -2.06
Shkbp1Q6P7W2 Gm14937-201ENSMUST00000119709 208 ntBASIC2.18□□□□□ -2.06
Shkbp1Q6P7W2 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.18□□□□□ -2.06
Shkbp1Q6P7W2 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Shkbp1Q6P7W2 Gm26415-201ENSMUST00000157673 292 ntBASIC2.18□□□□□ -2.06
Shkbp1Q6P7W2 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.18□□□□□ -2.06
Shkbp1Q6P7W2 Mir7009-201ENSMUST00000184519 64 ntBASIC2.18□□□□□ -2.06
Shkbp1Q6P7W2 Gm9156-201ENSMUST00000189660 463 ntBASIC2.18□□□□□ -2.06
Shkbp1Q6P7W2 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Shkbp1Q6P7W2 mt-Tv-201ENSMUST00000082389 69 ntBASIC2.18□□□□□ -2.06
Shkbp1Q6P7W2 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.18□□□□□ -2.06
Shkbp1Q6P7W2 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Shkbp1Q6P7W2 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Shkbp1Q6P7W2 Gm26339-201ENSMUST00000102368 99 ntBASIC2.17□□□□□ -2.06
Shkbp1Q6P7W2 Gm23670-201ENSMUST00000157469 119 ntBASIC2.17□□□□□ -2.06
Shkbp1Q6P7W2 Gm25371-201ENSMUST00000158162 101 ntBASIC2.17□□□□□ -2.06
Shkbp1Q6P7W2 Gm23817-201ENSMUST00000158449 104 ntBASIC2.17□□□□□ -2.06
Shkbp1Q6P7W2 Gm27878-201ENSMUST00000184000 106 ntBASIC2.17□□□□□ -2.06
Shkbp1Q6P7W2 Mir6901-201ENSMUST00000185062 62 ntBASIC2.17□□□□□ -2.06
Shkbp1Q6P7W2 Gm42807-201ENSMUST00000200141 329 ntBASIC2.17□□□□□ -2.06
Shkbp1Q6P7W2 Gm45386-201ENSMUST00000210194 218 ntBASIC2.17□□□□□ -2.06
Shkbp1Q6P7W2 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.17□□□□□ -2.06
Shkbp1Q6P7W2 Mir34a-201ENSMUST00000083559 102 ntBASIC2.17□□□□□ -2.06
Shkbp1Q6P7W2 Gm23038-201ENSMUST00000083873 104 ntBASIC2.17□□□□□ -2.06
Shkbp1Q6P7W2 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Shkbp1Q6P7W2 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Shkbp1Q6P7W2 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Shkbp1Q6P7W2 Gm23109-201ENSMUST00000116867 126 ntBASIC2.16□□□□□ -2.06
Shkbp1Q6P7W2 Gm6788-201ENSMUST00000166459 270 ntBASIC2.16□□□□□ -2.06
Shkbp1Q6P7W2 Gm24572-201ENSMUST00000175505 88 ntBASIC2.16□□□□□ -2.06
Shkbp1Q6P7W2 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC2.16□□□□□ -2.06
Shkbp1Q6P7W2 Snora33-201ENSMUST00000093556 129 ntBASIC2.16□□□□□ -2.06
Shkbp1Q6P7W2 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Shkbp1Q6P7W2 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Shkbp1Q6P7W2 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Shkbp1Q6P7W2 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.15□□□□□ -2.06
Shkbp1Q6P7W2 Gm24280-201ENSMUST00000104237 134 ntBASIC2.15□□□□□ -2.07
Shkbp1Q6P7W2 Gm14671-201ENSMUST00000121790 262 ntBASIC2.15□□□□□ -2.07
Shkbp1Q6P7W2 Gm16328-201ENSMUST00000126985 196 ntBASIC2.15□□□□□ -2.07
Shkbp1Q6P7W2 Gm16510-201ENSMUST00000153501 249 ntBASIC2.15□□□□□ -2.07
Shkbp1Q6P7W2 Gm25460-201ENSMUST00000157954 127 ntBASIC2.15□□□□□ -2.07
Shkbp1Q6P7W2 Gm22535-201ENSMUST00000158174 119 ntBASIC2.15□□□□□ -2.07
Shkbp1Q6P7W2 Gm22387-201ENSMUST00000158191 131 ntBASIC2.15□□□□□ -2.07
Shkbp1Q6P7W2 Gm25978-201ENSMUST00000158698 90 ntBASIC2.15□□□□□ -2.07
Shkbp1Q6P7W2 Mir3094-201ENSMUST00000175121 64 ntBASIC2.15□□□□□ -2.07
Shkbp1Q6P7W2 Gm44325-201ENSMUST00000196757 77 ntBASIC2.15□□□□□ -2.07
Shkbp1Q6P7W2 Gm45429-201ENSMUST00000209527 172 ntBASIC2.15□□□□□ -2.07
Shkbp1Q6P7W2 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.15□□□□□ -2.07
Shkbp1Q6P7W2 Gm25199-201ENSMUST00000083095 104 ntBASIC2.15□□□□□ -2.07
Shkbp1Q6P7W2 Mir301-201ENSMUST00000083655 86 ntBASIC2.15□□□□□ -2.07
Shkbp1Q6P7W2 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Shkbp1Q6P7W2 Gm23010-201ENSMUST00000104151 126 ntBASIC2.14□□□□□ -2.07
Shkbp1Q6P7W2 Gm26104-201ENSMUST00000157250 108 ntBASIC2.14□□□□□ -2.07
Shkbp1Q6P7W2 Gm22338-201ENSMUST00000157715 129 ntBASIC2.14□□□□□ -2.07
Shkbp1Q6P7W2 Gm28270-201ENSMUST00000188550 109 ntBASIC2.14□□□□□ -2.07
Shkbp1Q6P7W2 Gm28328-201ENSMUST00000188869 109 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 140 ms