Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Mir7215-201ENSMUST00000200383 51 ntBASIC2.49□□□□□ -2.01
Trim28Q62318 Gm6109-201ENSMUST00000223297 348 ntBASIC2.49□□□□□ -2.01
Trim28Q62318 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim28Q62318 Gm26265-201ENSMUST00000083277 135 ntBASIC2.49□□□□□ -2.01
Trim28Q62318 Gm22827-201ENSMUST00000083766 107 ntBASIC2.49□□□□□ -2.01
Trim28Q62318 Gm22554-201ENSMUST00000157798 147 ntBASIC2.48□□□□□ -2.01
Trim28Q62318 Gm25491-201ENSMUST00000158733 308 ntBASIC2.48□□□□□ -2.01
Trim28Q62318 Gm25836-201ENSMUST00000158918 123 ntBASIC2.48□□□□□ -2.01
Trim28Q62318 Snord50a-201ENSMUST00000178154 72 ntBASIC2.48□□□□□ -2.01
Trim28Q62318 Gm24463-201ENSMUST00000178417 72 ntBASIC2.48□□□□□ -2.01
Trim28Q62318 Gm26435-201ENSMUST00000179026 107 ntBASIC2.48□□□□□ -2.01
Trim28Q62318 Gm24044-201ENSMUST00000083107 156 ntBASIC2.48□□□□□ -2.01
Trim28Q62318 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.48□□□□□ -2.01
Trim28Q62318 Gm23246-201ENSMUST00000083371 67 ntBASIC2.48□□□□□ -2.01
Trim28Q62318 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
Trim28Q62318 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Trim28Q62318 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.48□□□□□ -2.01
Trim28Q62318 Gm42718-201ENSMUST00000197319 2681 ntBASIC2.47□□□□□ -2.01
Trim28Q62318 Gm25091-201ENSMUST00000103997 71 ntBASIC2.47□□□□□ -2.01
Trim28Q62318 Gm15289-201ENSMUST00000117793 244 ntBASIC2.47□□□□□ -2.01
Trim28Q62318 Gm22079-201ENSMUST00000157592 106 ntBASIC2.47□□□□□ -2.01
Trim28Q62318 Gm22515-201ENSMUST00000158273 305 ntBASIC2.47□□□□□ -2.01
Trim28Q62318 Gm23567-201ENSMUST00000178005 107 ntBASIC2.47□□□□□ -2.01
Trim28Q62318 Gm44308-201ENSMUST00000197080 99 ntBASIC2.47□□□□□ -2.01
Trim28Q62318 Gm26922-201ENSMUST00000082687 72 ntBASIC2.47□□□□□ -2.01
Trim28Q62318 Gm25513-201ENSMUST00000083861 162 ntBASIC2.47□□□□□ -2.01
Trim28Q62318 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
Trim28Q62318 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC2.47□□□□□ -2.01
Trim28Q62318 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Trim28Q62318 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.46□□□□□ -2.01
Trim28Q62318 Gm26074-201ENSMUST00000104063 129 ntBASIC2.46□□□□□ -2.02
Trim28Q62318 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.46□□□□□ -2.02
Trim28Q62318 Gm14567-201ENSMUST00000117155 174 ntBASIC2.46□□□□□ -2.02
Trim28Q62318 Mir7678-201ENSMUST00000185076 71 ntBASIC2.46□□□□□ -2.02
Trim28Q62318 CT571266.1-201ENSMUST00000222859 153 ntBASIC2.46□□□□□ -2.02
Trim28Q62318 Gm26126-201ENSMUST00000083188 164 ntBASIC2.46□□□□□ -2.02
Trim28Q62318 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Trim28Q62318 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Trim28Q62318 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Trim28Q62318 Gm22935-201ENSMUST00000103960 104 ntBASIC2.45□□□□□ -2.02
Trim28Q62318 Gm24375-201ENSMUST00000104397 132 ntBASIC2.45□□□□□ -2.02
Trim28Q62318 Gm22678-201ENSMUST00000116974 101 ntBASIC2.45□□□□□ -2.02
Trim28Q62318 Gm23670-201ENSMUST00000157469 119 ntBASIC2.45□□□□□ -2.02
Trim28Q62318 Gm24573-201ENSMUST00000175499 112 ntBASIC2.45□□□□□ -2.02
Trim28Q62318 Gm26864-201ENSMUST00000181346 156 ntBASIC2.45□□□□□ -2.02
Trim28Q62318 Mir3569-201ENSMUST00000185080 58 ntBASIC2.45□□□□□ -2.02
Trim28Q62318 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Trim28Q62318 Gm44464-201ENSMUST00000198010 138 ntBASIC2.45□□□□□ -2.02
Trim28Q62318 Gm43381-201ENSMUST00000198553 165 ntBASIC2.45□□□□□ -2.02
Trim28Q62318 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Trim28Q62318 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trim28Q62318 Mir547-201ENSMUST00000102051 78 ntBASIC2.44□□□□□ -2.02
Trim28Q62318 Gm22729-201ENSMUST00000158088 129 ntBASIC2.44□□□□□ -2.02
Trim28Q62318 Mir6376-201ENSMUST00000185149 131 ntBASIC2.44□□□□□ -2.02
Trim28Q62318 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trim28Q62318 Gm22196-201ENSMUST00000116865 109 ntBASIC2.43□□□□□ -2.02
Trim28Q62318 Gm12013-201ENSMUST00000121971 155 ntBASIC2.43□□□□□ -2.02
Trim28Q62318 Gm25825-201ENSMUST00000157091 124 ntBASIC2.43□□□□□ -2.02
Trim28Q62318 Gm24390-201ENSMUST00000179578 62 ntBASIC2.43□□□□□ -2.02
Trim28Q62318 Gm27672-201ENSMUST00000183751 204 ntBASIC2.43□□□□□ -2.02
Trim28Q62318 Gm27544-201ENSMUST00000185069 155 ntBASIC2.43□□□□□ -2.02
Trim28Q62318 Gm37557-201ENSMUST00000191640 139 ntBASIC2.43□□□□□ -2.02
Trim28Q62318 Mir7021-201ENSMUST00000197026 63 ntBASIC2.43□□□□□ -2.02
Trim28Q62318 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.43□□□□□ -2.02
Trim28Q62318 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trim28Q62318 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trim28Q62318 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trim28Q62318 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trim28Q62318 Gm25711-201ENSMUST00000158633 128 ntBASIC2.42□□□□□ -2.02
Trim28Q62318 Gm25933-201ENSMUST00000178943 108 ntBASIC2.42□□□□□ -2.02
Trim28Q62318 Mir6352-201ENSMUST00000184495 116 ntBASIC2.42□□□□□ -2.02
Trim28Q62318 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.42□□□□□ -2.02
Trim28Q62318 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.41□□□□□ -2.02
Trim28Q62318 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Trim28Q62318 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trim28Q62318 Gm23381-201ENSMUST00000157676 94 ntBASIC2.41□□□□□ -2.02
Trim28Q62318 Gm23033-201ENSMUST00000157996 134 ntBASIC2.41□□□□□ -2.02
Trim28Q62318 Gm24572-201ENSMUST00000175505 88 ntBASIC2.41□□□□□ -2.02
Trim28Q62318 Gm37330-201ENSMUST00000192606 153 ntBASIC2.41□□□□□ -2.02
Trim28Q62318 Gm22454-201ENSMUST00000082583 107 ntBASIC2.41□□□□□ -2.02
Trim28Q62318 Gm22306-201ENSMUST00000082692 107 ntBASIC2.41□□□□□ -2.02
Trim28Q62318 Gm23507-201ENSMUST00000083078 107 ntBASIC2.41□□□□□ -2.02
Trim28Q62318 Gm26175-201ENSMUST00000083794 131 ntBASIC2.41□□□□□ -2.02
Trim28Q62318 Gm22723-201ENSMUST00000083820 129 ntBASIC2.41□□□□□ -2.02
Trim28Q62318 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Trim28Q62318 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.4□□□□□ -2.02
Trim28Q62318 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Trim28Q62318 Gm23015-201ENSMUST00000104145 128 ntBASIC2.4□□□□□ -2.03
Trim28Q62318 Gm25996-201ENSMUST00000175393 117 ntBASIC2.4□□□□□ -2.03
Trim28Q62318 Gm28270-201ENSMUST00000188550 109 ntBASIC2.4□□□□□ -2.03
Trim28Q62318 Gm28328-201ENSMUST00000188869 109 ntBASIC2.4□□□□□ -2.03
Trim28Q62318 Gm37778-201ENSMUST00000191732 190 ntBASIC2.4□□□□□ -2.03
Trim28Q62318 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC2.4□□□□□ -2.03
Trim28Q62318 Gm44666-201ENSMUST00000208544 391 ntBASIC2.4□□□□□ -2.03
Trim28Q62318 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.4□□□□□ -2.03
Trim28Q62318 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.4□□□□□ -2.03
Trim28Q62318 Gm22972-201ENSMUST00000083297 131 ntBASIC2.4□□□□□ -2.03
Trim28Q62318 Mir155-201ENSMUST00000083463 65 ntBASIC2.4□□□□□ -2.03
Trim28Q62318 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.4□□□□□ -2.03
Trim28Q62318 Gm25681-201ENSMUST00000083938 106 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms