Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm45005-201ENSMUST00000206640 157 ntBASIC0.15□□□□□ -2.39
Trav3-3Q5R1C3 Gm14919-201ENSMUST00000120839 390 ntBASIC0.14□□□□□ -2.39
Trav3-3Q5R1C3 Gm14775-201ENSMUST00000122089 310 ntBASIC0.14□□□□□ -2.39
Trav3-3Q5R1C3 Gm26482-201ENSMUST00000158015 62 ntBASIC0.14□□□□□ -2.39
Trav3-3Q5R1C3 Gm22011-201ENSMUST00000158790 123 ntBASIC0.14□□□□□ -2.39
Trav3-3Q5R1C3 Gm22239-201ENSMUST00000175220 103 ntBASIC0.14□□□□□ -2.39
Trav3-3Q5R1C3 Gm22450-201ENSMUST00000179641 107 ntBASIC0.14□□□□□ -2.39
Trav3-3Q5R1C3 Gm25473-201ENSMUST00000180191 107 ntBASIC0.14□□□□□ -2.39
Trav3-3Q5R1C3 Gm45616-201ENSMUST00000211711 319 ntBASIC0.14□□□□□ -2.39
Trav3-3Q5R1C3 Gm7240-201ENSMUST00000220769 664 ntBASIC0.14□□□□□ -2.39
Trav3-3Q5R1C3 Gm24856-201ENSMUST00000082809 107 ntBASIC0.14□□□□□ -2.39
Trav3-3Q5R1C3 Gm26071-201ENSMUST00000083261 107 ntBASIC0.14□□□□□ -2.39
Trav3-3Q5R1C3 Gm24521-201ENSMUST00000083958 107 ntBASIC0.14□□□□□ -2.39
Trav3-3Q5R1C3 Gm23989-201ENSMUST00000117030 66 ntBASIC0.13□□□□□ -2.39
Trav3-3Q5R1C3 Gm15213-201ENSMUST00000122098 216 ntBASIC0.13□□□□□ -2.39
Trav3-3Q5R1C3 Gm22887-201ENSMUST00000178586 107 ntBASIC0.13□□□□□ -2.39
Trav3-3Q5R1C3 Gm27717-201ENSMUST00000183933 151 ntBASIC0.13□□□□□ -2.39
Trav3-3Q5R1C3 AC164117.2-201ENSMUST00000222090 327 ntBASIC0.13□□□□□ -2.39
Trav3-3Q5R1C3 Gm22576-201ENSMUST00000083733 104 ntBASIC0.13□□□□□ -2.39
Trav3-3Q5R1C3 Gm13922-201ENSMUST00000119505 156 ntBASIC0.12□□□□□ -2.39
Trav3-3Q5R1C3 Scarna8-201ENSMUST00000158333 131 ntBASIC0.12□□□□□ -2.39
Trav3-3Q5R1C3 Gm23008-201ENSMUST00000158946 80 ntBASIC0.12□□□□□ -2.39
Trav3-3Q5R1C3 Mir3108-201ENSMUST00000175500 79 ntBASIC0.12□□□□□ -2.39
Trav3-3Q5R1C3 Gm24415-201ENSMUST00000180218 107 ntBASIC0.12□□□□□ -2.39
Trav3-3Q5R1C3 Gm37404-201ENSMUST00000195726 359 ntBASIC0.12□□□□□ -2.39
Trav3-3Q5R1C3 Gm44464-201ENSMUST00000198010 138 ntBASIC0.12□□□□□ -2.39
Trav3-3Q5R1C3 Gm25142-201ENSMUST00000082698 107 ntBASIC0.12□□□□□ -2.39
Trav3-3Q5R1C3 Mir10b-201ENSMUST00000083566 68 ntBASIC0.12□□□□□ -2.39
Trav3-3Q5R1C3 Mir710-201ENSMUST00000102088 110 ntBASIC0.11□□□□□ -2.39
Trav3-3Q5R1C3 Gm24559-201ENSMUST00000157519 121 ntBASIC0.11□□□□□ -2.39
Trav3-3Q5R1C3 Gm25424-201ENSMUST00000157612 58 ntBASIC0.11□□□□□ -2.39
Trav3-3Q5R1C3 Gm38109-201ENSMUST00000195386 181 ntBASIC0.11□□□□□ -2.39
Trav3-3Q5R1C3 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
Trav3-3Q5R1C3 Gm44457-201ENSMUST00000198109 76 ntBASIC0.11□□□□□ -2.39
Trav3-3Q5R1C3 AC166341.3-201ENSMUST00000221861 114 ntBASIC0.11□□□□□ -2.39
Trav3-3Q5R1C3 Mir448-201ENSMUST00000083516 112 ntBASIC0.11□□□□□ -2.39
Trav3-3Q5R1C3 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
Trav3-3Q5R1C3 Gm23941-201ENSMUST00000101953 107 ntBASIC0.1□□□□□ -2.39
Trav3-3Q5R1C3 Gm23655-201ENSMUST00000122627 105 ntBASIC0.1□□□□□ -2.39
Trav3-3Q5R1C3 Gm24635-201ENSMUST00000122712 128 ntBASIC0.1□□□□□ -2.39
Trav3-3Q5R1C3 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.1□□□□□ -2.39
Trav3-3Q5R1C3 Gm25494-201ENSMUST00000158143 100 ntBASIC0.1□□□□□ -2.39
Trav3-3Q5R1C3 Gm25976-201ENSMUST00000158695 130 ntBASIC0.1□□□□□ -2.39
Trav3-3Q5R1C3 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.1□□□□□ -2.39
Trav3-3Q5R1C3 Gm25241-201ENSMUST00000174909 84 ntBASIC0.1□□□□□ -2.39
Trav3-3Q5R1C3 Gm26217-201ENSMUST00000175212 84 ntBASIC0.1□□□□□ -2.39
Trav3-3Q5R1C3 Mir7010-201ENSMUST00000183464 63 ntBASIC0.1□□□□□ -2.39
Trav3-3Q5R1C3 Gm19572-201ENSMUST00000214326 338 ntBASIC0.1□□□□□ -2.39
Trav3-3Q5R1C3 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.09□□□□□ -2.39
Trav3-3Q5R1C3 Gm24509-201ENSMUST00000157086 101 ntBASIC0.09□□□□□ -2.4
Trav3-3Q5R1C3 Gm25358-201ENSMUST00000157189 101 ntBASIC0.09□□□□□ -2.4
Trav3-3Q5R1C3 Gm44858-201ENSMUST00000207360 154 ntBASIC0.09□□□□□ -2.4
Trav3-3Q5R1C3 Gm44563-201ENSMUST00000207958 178 ntBASIC0.09□□□□□ -2.4
Trav3-3Q5R1C3 Gm26497-201ENSMUST00000083146 107 ntBASIC0.09□□□□□ -2.4
Trav3-3Q5R1C3 Gm26123-201ENSMUST00000083363 135 ntBASIC0.09□□□□□ -2.4
Trav3-3Q5R1C3 Gm15030-201ENSMUST00000119804 484 ntBASIC0.08□□□□□ -2.4
Trav3-3Q5R1C3 Gm22520-201ENSMUST00000158269 129 ntBASIC0.08□□□□□ -2.4
Trav3-3Q5R1C3 Gm25952-201ENSMUST00000175329 74 ntBASIC0.08□□□□□ -2.4
Trav3-3Q5R1C3 Mir6390-201ENSMUST00000184405 129 ntBASIC0.08□□□□□ -2.4
Trav3-3Q5R1C3 Gm28418-201ENSMUST00000186179 423 ntBASIC0.08□□□□□ -2.4
Trav3-3Q5R1C3 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.08□□□□□ -2.4
Trav3-3Q5R1C3 CT010505.1-201ENSMUST00000227026 396 ntBASIC0.08□□□□□ -2.4
Trav3-3Q5R1C3 Gm22753-201ENSMUST00000083657 107 ntBASIC0.08□□□□□ -2.4
Trav3-3Q5R1C3 Gm22767-201ENSMUST00000158365 165 ntBASIC0.07□□□□□ -2.4
Trav3-3Q5R1C3 Gm25024-201ENSMUST00000179667 104 ntBASIC0.07□□□□□ -2.4
Trav3-3Q5R1C3 Gm23186-201ENSMUST00000180078 107 ntBASIC0.07□□□□□ -2.4
Trav3-3Q5R1C3 Gm28211-201ENSMUST00000190920 315 ntBASIC0.07□□□□□ -2.4
Trav3-3Q5R1C3 Gm37997-201ENSMUST00000193515 267 ntBASIC0.07□□□□□ -2.4
Trav3-3Q5R1C3 Mir7229-201ENSMUST00000197062 53 ntBASIC0.07□□□□□ -2.4
Trav3-3Q5R1C3 Gm42594-201ENSMUST00000199511 246 ntBASIC0.07□□□□□ -2.4
Trav3-3Q5R1C3 Gm3702-201ENSMUST00000211754 346 ntBASIC0.07□□□□□ -2.4
Trav3-3Q5R1C3 Mir200a-201ENSMUST00000083466 90 ntBASIC0.07□□□□□ -2.4
Trav3-3Q5R1C3 Gm22673-201ENSMUST00000104415 131 ntBASIC0.06□□□□□ -2.4
Trav3-3Q5R1C3 Gm22709-201ENSMUST00000116893 111 ntBASIC0.06□□□□□ -2.4
Trav3-3Q5R1C3 Gm16186-201ENSMUST00000120132 216 ntBASIC0.06□□□□□ -2.4
Trav3-3Q5R1C3 Gm14301-201ENSMUST00000120181 324 ntBASIC0.06□□□□□ -2.4
Trav3-3Q5R1C3 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.06□□□□□ -2.4
Trav3-3Q5R1C3 Gm25664-201ENSMUST00000157697 107 ntBASIC0.06□□□□□ -2.4
Trav3-3Q5R1C3 Gm24728-201ENSMUST00000158226 125 ntBASIC0.06□□□□□ -2.4
Trav3-3Q5R1C3 Gm7258-201ENSMUST00000179317 300 ntBASIC0.06□□□□□ -2.4
Trav3-3Q5R1C3 Gm25820-201ENSMUST00000198589 127 ntBASIC0.06□□□□□ -2.4
Trav3-3Q5R1C3 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.06□□□□□ -2.4
Trav3-3Q5R1C3 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.06□□□□□ -2.4
Trav3-3Q5R1C3 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.06□□□□□ -2.4
Trav3-3Q5R1C3 Gm25828-201ENSMUST00000157087 95 ntBASIC0.05□□□□□ -2.4
Trav3-3Q5R1C3 Gm22448-201ENSMUST00000179254 107 ntBASIC0.05□□□□□ -2.4
Trav3-3Q5R1C3 Mir7227-201ENSMUST00000200408 59 ntBASIC0.05□□□□□ -2.4
Trav3-3Q5R1C3 Mir532-201ENSMUST00000093630 96 ntBASIC0.05□□□□□ -2.4
Trav3-3Q5R1C3 Gm22784-201ENSMUST00000104088 132 ntBASIC0.04□□□□□ -2.4
Trav3-3Q5R1C3 Gm25170-201ENSMUST00000104191 129 ntBASIC0.04□□□□□ -2.4
Trav3-3Q5R1C3 Gm12797-201ENSMUST00000118645 273 ntBASIC0.04□□□□□ -2.4
Trav3-3Q5R1C3 Gm11248-201ENSMUST00000119568 201 ntBASIC0.04□□□□□ -2.4
Trav3-3Q5R1C3 Gm13797-201ENSMUST00000121792 120 ntBASIC0.04□□□□□ -2.4
Trav3-3Q5R1C3 Gm25323-201ENSMUST00000122555 103 ntBASIC0.04□□□□□ -2.4
Trav3-3Q5R1C3 Gm29140-201ENSMUST00000190187 476 ntBASIC0.04□□□□□ -2.4
Trav3-3Q5R1C3 Gm44455-201ENSMUST00000200061 82 ntBASIC0.04□□□□□ -2.4
Trav3-3Q5R1C3 Gm25634-201ENSMUST00000082667 105 ntBASIC0.04□□□□□ -2.4
Trav3-3Q5R1C3 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
Trav3-3Q5R1C3 Gm26076-201ENSMUST00000104065 105 ntBASIC0.03□□□□□ -2.4
Trav3-3Q5R1C3 Gm13577-201ENSMUST00000121365 205 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 133.8 ms