Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm24154-201ENSMUST00000175261 130 ntBASIC2.31□□□□□ -2.04
Rnf180Q3U827 Mir7016-201ENSMUST00000184308 72 ntBASIC2.31□□□□□ -2.04
Rnf180Q3U827 Gm37545-201ENSMUST00000186512 148 ntBASIC2.31□□□□□ -2.04
Rnf180Q3U827 Mir3969-201ENSMUST00000197106 92 ntBASIC2.31□□□□□ -2.04
Rnf180Q3U827 CT485607.2-201ENSMUST00000214650 91 ntBASIC2.31□□□□□ -2.04
Rnf180Q3U827 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
Rnf180Q3U827 Snord90-201ENSMUST00000104568 111 ntBASIC2.3□□□□□ -2.04
Rnf180Q3U827 Gm14567-201ENSMUST00000117155 174 ntBASIC2.3□□□□□ -2.04
Rnf180Q3U827 Gm15069-201ENSMUST00000117792 192 ntBASIC2.3□□□□□ -2.04
Rnf180Q3U827 Gm15068-201ENSMUST00000119796 192 ntBASIC2.3□□□□□ -2.04
Rnf180Q3U827 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.3□□□□□ -2.04
Rnf180Q3U827 Scarna3b-201ENSMUST00000157533 139 ntBASIC2.3□□□□□ -2.04
Rnf180Q3U827 Gm27934-201ENSMUST00000158795 63 ntBASIC2.3□□□□□ -2.04
Rnf180Q3U827 Gm20477-201ENSMUST00000174028 280 ntBASIC2.3□□□□□ -2.04
Rnf180Q3U827 AC117232.1-201ENSMUST00000197964 119 ntBASIC2.3□□□□□ -2.04
Rnf180Q3U827 Gm23370-201ENSMUST00000199545 130 ntBASIC2.3□□□□□ -2.04
Rnf180Q3U827 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
Rnf180Q3U827 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.29□□□□□ -2.04
Rnf180Q3U827 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Rnf180Q3U827 Gm24171-201ENSMUST00000104126 131 ntBASIC2.29□□□□□ -2.04
Rnf180Q3U827 Gm23898-201ENSMUST00000158111 103 ntBASIC2.29□□□□□ -2.04
Rnf180Q3U827 Gm28669-201ENSMUST00000188400 100 ntBASIC2.29□□□□□ -2.04
Rnf180Q3U827 Gm44325-201ENSMUST00000196757 77 ntBASIC2.29□□□□□ -2.04
Rnf180Q3U827 Gm42719-201ENSMUST00000197393 355 ntBASIC2.29□□□□□ -2.04
Rnf180Q3U827 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.29□□□□□ -2.04
Rnf180Q3U827 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.29□□□□□ -2.04
Rnf180Q3U827 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.29□□□□□ -2.04
Rnf180Q3U827 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Rnf180Q3U827 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.28□□□□□ -2.04
Rnf180Q3U827 Gm24141-201ENSMUST00000122776 115 ntBASIC2.28□□□□□ -2.04
Rnf180Q3U827 Gm22565-201ENSMUST00000175540 69 ntBASIC2.28□□□□□ -2.04
Rnf180Q3U827 Gm29613-201ENSMUST00000185846 313 ntBASIC2.28□□□□□ -2.04
Rnf180Q3U827 Gm29544-201ENSMUST00000188860 313 ntBASIC2.28□□□□□ -2.04
Rnf180Q3U827 Gm28808-201ENSMUST00000190978 313 ntBASIC2.28□□□□□ -2.04
Rnf180Q3U827 Gm44464-201ENSMUST00000198010 138 ntBASIC2.28□□□□□ -2.04
Rnf180Q3U827 Gm44976-201ENSMUST00000205543 261 ntBASIC2.28□□□□□ -2.04
Rnf180Q3U827 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.28□□□□□ -2.04
Rnf180Q3U827 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.28□□□□□ -2.04
Rnf180Q3U827 Mir201-201ENSMUST00000083470 66 ntBASIC2.28□□□□□ -2.04
Rnf180Q3U827 Mir34a-201ENSMUST00000083559 102 ntBASIC2.28□□□□□ -2.04
Rnf180Q3U827 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
Rnf180Q3U827 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Rnf180Q3U827 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Rnf180Q3U827 Gm22946-201ENSMUST00000158558 82 ntBASIC2.27□□□□□ -2.05
Rnf180Q3U827 Gm23342-201ENSMUST00000158958 115 ntBASIC2.27□□□□□ -2.05
Rnf180Q3U827 Gm37778-201ENSMUST00000191732 190 ntBASIC2.27□□□□□ -2.05
Rnf180Q3U827 Gm24624-201ENSMUST00000082617 164 ntBASIC2.27□□□□□ -2.05
Rnf180Q3U827 Gm25812-201ENSMUST00000082751 103 ntBASIC2.27□□□□□ -2.05
Rnf180Q3U827 Snord61-201ENSMUST00000083176 71 ntBASIC2.27□□□□□ -2.05
Rnf180Q3U827 Gm24412-201ENSMUST00000083426 109 ntBASIC2.27□□□□□ -2.05
Rnf180Q3U827 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Rnf180Q3U827 Gm14937-201ENSMUST00000119709 208 ntBASIC2.26□□□□□ -2.05
Rnf180Q3U827 Gm43381-201ENSMUST00000198553 165 ntBASIC2.26□□□□□ -2.05
Rnf180Q3U827 mt-Ta-201ENSMUST00000082398 69 ntBASIC2.26□□□□□ -2.05
Rnf180Q3U827 Gm24461-201ENSMUST00000082735 103 ntBASIC2.26□□□□□ -2.05
Rnf180Q3U827 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.26□□□□□ -2.05
Rnf180Q3U827 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Rnf180Q3U827 Gm13231-201ENSMUST00000119218 2850 ntBASIC2.25□□□□□ -2.05
Rnf180Q3U827 Gm22105-201ENSMUST00000116734 116 ntBASIC2.25□□□□□ -2.05
Rnf180Q3U827 Gm24559-201ENSMUST00000157519 121 ntBASIC2.25□□□□□ -2.05
Rnf180Q3U827 Gm25558-201ENSMUST00000158083 106 ntBASIC2.25□□□□□ -2.05
Rnf180Q3U827 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Rnf180Q3U827 Gm24661-201ENSMUST00000083205 104 ntBASIC2.25□□□□□ -2.05
Rnf180Q3U827 Gm26074-201ENSMUST00000104063 129 ntBASIC2.24□□□□□ -2.05
Rnf180Q3U827 Gm24478-201ENSMUST00000157439 158 ntBASIC2.24□□□□□ -2.05
Rnf180Q3U827 Gm22163-201ENSMUST00000158408 135 ntBASIC2.24□□□□□ -2.05
Rnf180Q3U827 Gm25658-201ENSMUST00000158472 128 ntBASIC2.24□□□□□ -2.05
Rnf180Q3U827 Gm43865-201ENSMUST00000204721 127 ntBASIC2.24□□□□□ -2.05
Rnf180Q3U827 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Rnf180Q3U827 Gm24605-201ENSMUST00000104772 96 ntBASIC2.23□□□□□ -2.05
Rnf180Q3U827 Gm22929-201ENSMUST00000175517 107 ntBASIC2.23□□□□□ -2.05
Rnf180Q3U827 Gm23567-201ENSMUST00000178005 107 ntBASIC2.23□□□□□ -2.05
Rnf180Q3U827 Gm25697-201ENSMUST00000082902 98 ntBASIC2.23□□□□□ -2.05
Rnf180Q3U827 Gm23260-201ENSMUST00000158317 172 ntBASIC2.22□□□□□ -2.05
Rnf180Q3U827 Gm22775-201ENSMUST00000177630 120 ntBASIC2.22□□□□□ -2.05
Rnf180Q3U827 Gm23569-201ENSMUST00000180120 120 ntBASIC2.22□□□□□ -2.05
Rnf180Q3U827 Gm45492-201ENSMUST00000211611 288 ntBASIC2.22□□□□□ -2.05
Rnf180Q3U827 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.22□□□□□ -2.05
Rnf180Q3U827 Gm25588-201ENSMUST00000082501 140 ntBASIC2.22□□□□□ -2.05
Rnf180Q3U827 Gm24445-201ENSMUST00000083981 107 ntBASIC2.22□□□□□ -2.05
Rnf180Q3U827 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Rnf180Q3U827 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Rnf180Q3U827 Gm23656-201ENSMUST00000122626 112 ntBASIC2.21□□□□□ -2.06
Rnf180Q3U827 Gm22790-201ENSMUST00000157229 129 ntBASIC2.21□□□□□ -2.06
Rnf180Q3U827 Gm23181-201ENSMUST00000158685 110 ntBASIC2.21□□□□□ -2.06
Rnf180Q3U827 Gm22665-201ENSMUST00000158720 275 ntBASIC2.21□□□□□ -2.06
Rnf180Q3U827 Gm8219-201ENSMUST00000218309 242 ntBASIC2.21□□□□□ -2.06
Rnf180Q3U827 Gm25878-201ENSMUST00000104327 93 ntBASIC2.2□□□□□ -2.06
Rnf180Q3U827 Gm23328-201ENSMUST00000157418 132 ntBASIC2.2□□□□□ -2.06
Rnf180Q3U827 Gm22966-201ENSMUST00000157957 129 ntBASIC2.2□□□□□ -2.06
Rnf180Q3U827 Snord87-201ENSMUST00000175437 87 ntBASIC2.2□□□□□ -2.06
Rnf180Q3U827 Mir7683-201ENSMUST00000183842 61 ntBASIC2.2□□□□□ -2.06
Rnf180Q3U827 Gm18665-201ENSMUST00000189783 270 ntBASIC2.2□□□□□ -2.06
Rnf180Q3U827 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.2□□□□□ -2.06
Rnf180Q3U827 Gm25409-201ENSMUST00000083764 131 ntBASIC2.2□□□□□ -2.06
Rnf180Q3U827 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.2□□□□□ -2.06
Rnf180Q3U827 Mir343-201ENSMUST00000102360 75 ntBASIC2.19□□□□□ -2.06
Rnf180Q3U827 Gm14923-201ENSMUST00000118270 155 ntBASIC2.19□□□□□ -2.06
Rnf180Q3U827 Gm24717-201ENSMUST00000157522 124 ntBASIC2.19□□□□□ -2.06
Rnf180Q3U827 Gm21885-201ENSMUST00000178891 327 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 170.7 ms