Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.16□□□□□ -1.9
Rnf40Q3U319 Gm23249-201ENSMUST00000083369 161 ntBASIC3.16□□□□□ -1.9
Rnf40Q3U319 Gm24412-201ENSMUST00000083426 109 ntBASIC3.16□□□□□ -1.9
Rnf40Q3U319 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Rnf40Q3U319 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Rnf40Q3U319 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Rnf40Q3U319 Gm12412-201ENSMUST00000121867 328 ntBASIC3.15□□□□□ -1.91
Rnf40Q3U319 Gm25860-201ENSMUST00000158252 126 ntBASIC3.15□□□□□ -1.91
Rnf40Q3U319 Gm26061-201ENSMUST00000175584 108 ntBASIC3.15□□□□□ -1.91
Rnf40Q3U319 Gm44355-201ENSMUST00000200417 104 ntBASIC3.15□□□□□ -1.91
Rnf40Q3U319 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.15□□□□□ -1.91
Rnf40Q3U319 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Rnf40Q3U319 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Rnf40Q3U319 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Rnf40Q3U319 Gm22497-201ENSMUST00000104499 131 ntBASIC3.14□□□□□ -1.91
Rnf40Q3U319 Gm12941-201ENSMUST00000117934 220 ntBASIC3.14□□□□□ -1.91
Rnf40Q3U319 Gm23667-201ENSMUST00000157466 120 ntBASIC3.14□□□□□ -1.91
Rnf40Q3U319 Gm23996-201ENSMUST00000158062 131 ntBASIC3.14□□□□□ -1.91
Rnf40Q3U319 Gm24771-201ENSMUST00000158508 137 ntBASIC3.14□□□□□ -1.91
Rnf40Q3U319 Mir3961-201ENSMUST00000198795 59 ntBASIC3.14□□□□□ -1.91
Rnf40Q3U319 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Rnf40Q3U319 Gm24918-201ENSMUST00000083022 130 ntBASIC3.14□□□□□ -1.91
Rnf40Q3U319 Gm23570-201ENSMUST00000083029 104 ntBASIC3.14□□□□□ -1.91
Rnf40Q3U319 AF357428-201ENSMUST00000083815 69 ntBASIC3.14□□□□□ -1.91
Rnf40Q3U319 Gm23344-201ENSMUST00000083818 68 ntBASIC3.14□□□□□ -1.91
Rnf40Q3U319 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC3.14□□□□□ -1.91
Rnf40Q3U319 AL645643.1-201ENSMUST00000222438 3897 ntBASIC3.14□□□□□ -1.91
Rnf40Q3U319 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Rnf40Q3U319 Gm27592-201ENSMUST00000157729 126 ntBASIC3.13□□□□□ -1.91
Rnf40Q3U319 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.13□□□□□ -1.91
Rnf40Q3U319 Gm22174-201ENSMUST00000175050 125 ntBASIC3.13□□□□□ -1.91
Rnf40Q3U319 Gm22692-201ENSMUST00000175055 125 ntBASIC3.13□□□□□ -1.91
Rnf40Q3U319 Gm27634-201ENSMUST00000175060 126 ntBASIC3.13□□□□□ -1.91
Rnf40Q3U319 Gm22460-201ENSMUST00000175269 124 ntBASIC3.13□□□□□ -1.91
Rnf40Q3U319 Gm25535-201ENSMUST00000175364 125 ntBASIC3.13□□□□□ -1.91
Rnf40Q3U319 Gm24365-201ENSMUST00000175384 125 ntBASIC3.13□□□□□ -1.91
Rnf40Q3U319 Gm44310-201ENSMUST00000175424 126 ntBASIC3.13□□□□□ -1.91
Rnf40Q3U319 Gm22639-201ENSMUST00000175591 125 ntBASIC3.13□□□□□ -1.91
Rnf40Q3U319 Gm24979-201ENSMUST00000178626 126 ntBASIC3.13□□□□□ -1.91
Rnf40Q3U319 Gm27743-201ENSMUST00000185136 126 ntBASIC3.13□□□□□ -1.91
Rnf40Q3U319 Gm23370-201ENSMUST00000199545 130 ntBASIC3.13□□□□□ -1.91
Rnf40Q3U319 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.13□□□□□ -1.91
Rnf40Q3U319 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Rnf40Q3U319 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Rnf40Q3U319 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Rnf40Q3U319 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Rnf40Q3U319 Gm22768-201ENSMUST00000158366 153 ntBASIC3.12□□□□□ -1.91
Rnf40Q3U319 Gm27419-201ENSMUST00000184576 109 ntBASIC3.12□□□□□ -1.91
Rnf40Q3U319 Gm45522-201ENSMUST00000210784 166 ntBASIC3.12□□□□□ -1.91
Rnf40Q3U319 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.12□□□□□ -1.91
Rnf40Q3U319 AC159093.2-201ENSMUST00000227881 297 ntBASIC3.12□□□□□ -1.91
Rnf40Q3U319 Gm23297-201ENSMUST00000083184 127 ntBASIC3.12□□□□□ -1.91
Rnf40Q3U319 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.12□□□□□ -1.91
Rnf40Q3U319 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Rnf40Q3U319 Gm14405-201ENSMUST00000117808 2330 ntBASIC3.11□□□□□ -1.91
Rnf40Q3U319 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Rnf40Q3U319 Gm25168-201ENSMUST00000104189 132 ntBASIC3.11□□□□□ -1.91
Rnf40Q3U319 Gm24988-201ENSMUST00000104460 121 ntBASIC3.11□□□□□ -1.91
Rnf40Q3U319 Gm22732-201ENSMUST00000158093 121 ntBASIC3.11□□□□□ -1.91
Rnf40Q3U319 Gm23548-201ENSMUST00000158963 106 ntBASIC3.11□□□□□ -1.91
Rnf40Q3U319 Gm25618-201ENSMUST00000179484 107 ntBASIC3.11□□□□□ -1.91
Rnf40Q3U319 Gm45471-201ENSMUST00000211270 281 ntBASIC3.11□□□□□ -1.91
Rnf40Q3U319 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.11□□□□□ -1.91
Rnf40Q3U319 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Rnf40Q3U319 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Rnf40Q3U319 n-R5s200-201ENSMUST00000104194 113 ntBASIC3.1□□□□□ -1.91
Rnf40Q3U319 Gm23175-201ENSMUST00000104371 132 ntBASIC3.1□□□□□ -1.91
Rnf40Q3U319 Mir1197-201ENSMUST00000117037 120 ntBASIC3.1□□□□□ -1.91
Rnf40Q3U319 Gm26485-201ENSMUST00000158019 64 ntBASIC3.1□□□□□ -1.91
Rnf40Q3U319 Gm22425-201ENSMUST00000158532 138 ntBASIC3.1□□□□□ -1.91
Rnf40Q3U319 Gm25241-201ENSMUST00000174909 84 ntBASIC3.1□□□□□ -1.91
Rnf40Q3U319 Gm22858-201ENSMUST00000174972 76 ntBASIC3.1□□□□□ -1.91
Rnf40Q3U319 Gm26217-201ENSMUST00000175212 84 ntBASIC3.1□□□□□ -1.91
Rnf40Q3U319 Mir7062-201ENSMUST00000185038 66 ntBASIC3.1□□□□□ -1.91
Rnf40Q3U319 Gm43540-201ENSMUST00000196320 3848 ntBASIC3.1□□□□□ -1.91
Rnf40Q3U319 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.1□□□□□ -1.91
Rnf40Q3U319 AC129202.1-201ENSMUST00000224895 526 ntBASIC3.1□□□□□ -1.91
Rnf40Q3U319 Gm25635-201ENSMUST00000082675 131 ntBASIC3.1□□□□□ -1.91
Rnf40Q3U319 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Rnf40Q3U319 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Rnf40Q3U319 Gm23470-201ENSMUST00000157129 120 ntBASIC3.09□□□□□ -1.91
Rnf40Q3U319 Gm24868-201ENSMUST00000157265 136 ntBASIC3.09□□□□□ -1.91
Rnf40Q3U319 Gm24008-201ENSMUST00000157733 138 ntBASIC3.09□□□□□ -1.91
Rnf40Q3U319 Gm24077-201ENSMUST00000158183 136 ntBASIC3.09□□□□□ -1.91
Rnf40Q3U319 Gm23409-201ENSMUST00000158516 237 ntBASIC3.09□□□□□ -1.91
Rnf40Q3U319 Gm27330-201ENSMUST00000184689 132 ntBASIC3.09□□□□□ -1.91
Rnf40Q3U319 Gm26123-201ENSMUST00000083363 135 ntBASIC3.09□□□□□ -1.91
Rnf40Q3U319 Mir184-201ENSMUST00000083662 69 ntBASIC3.09□□□□□ -1.91
Rnf40Q3U319 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Rnf40Q3U319 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Rnf40Q3U319 Mir764-201ENSMUST00000103259 108 ntBASIC3.08□□□□□ -1.92
Rnf40Q3U319 Gm12276-201ENSMUST00000121709 301 ntBASIC3.08□□□□□ -1.92
Rnf40Q3U319 Gm24936-201ENSMUST00000122598 247 ntBASIC3.08□□□□□ -1.92
Rnf40Q3U319 Gm22380-201ENSMUST00000157479 95 ntBASIC3.08□□□□□ -1.92
Rnf40Q3U319 Gm24138-201ENSMUST00000157572 114 ntBASIC3.08□□□□□ -1.92
Rnf40Q3U319 Gm26141-201ENSMUST00000175299 126 ntBASIC3.08□□□□□ -1.92
Rnf40Q3U319 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC3.08□□□□□ -1.92
Rnf40Q3U319 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.08□□□□□ -1.92
Rnf40Q3U319 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Rnf40Q3U319 Mir673-201ENSMUST00000102361 91 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms