Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.88□□□□□ -2.11
Col28a1Q2UY11 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Col28a1Q2UY11 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.87□□□□□ -2.11
Col28a1Q2UY11 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.87□□□□□ -2.11
Col28a1Q2UY11 Gm22790-201ENSMUST00000157229 129 ntBASIC1.87□□□□□ -2.11
Col28a1Q2UY11 Gm22212-201ENSMUST00000158096 106 ntBASIC1.87□□□□□ -2.11
Col28a1Q2UY11 Gm27792-201ENSMUST00000184031 115 ntBASIC1.87□□□□□ -2.11
Col28a1Q2UY11 Gm27979-201ENSMUST00000185126 56 ntBASIC1.87□□□□□ -2.11
Col28a1Q2UY11 Gm25588-201ENSMUST00000082501 140 ntBASIC1.87□□□□□ -2.11
Col28a1Q2UY11 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Col28a1Q2UY11 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
Col28a1Q2UY11 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.86□□□□□ -2.11
Col28a1Q2UY11 Mir450b-201ENSMUST00000102095 82 ntBASIC1.86□□□□□ -2.11
Col28a1Q2UY11 Gm44489-201ENSMUST00000104619 97 ntBASIC1.86□□□□□ -2.11
Col28a1Q2UY11 Gm22151-201ENSMUST00000116963 58 ntBASIC1.86□□□□□ -2.11
Col28a1Q2UY11 Gm13246-201ENSMUST00000120994 315 ntBASIC1.86□□□□□ -2.11
Col28a1Q2UY11 Gm24246-201ENSMUST00000157315 132 ntBASIC1.86□□□□□ -2.11
Col28a1Q2UY11 Gm23113-201ENSMUST00000158477 99 ntBASIC1.86□□□□□ -2.11
Col28a1Q2UY11 Mir6379-201ENSMUST00000183392 115 ntBASIC1.86□□□□□ -2.11
Col28a1Q2UY11 Gm25402-201ENSMUST00000082966 131 ntBASIC1.86□□□□□ -2.11
Col28a1Q2UY11 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.86□□□□□ -2.11
Col28a1Q2UY11 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.86□□□□□ -2.11
Col28a1Q2UY11 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.86□□□□□ -2.11
Col28a1Q2UY11 Gm24049-201ENSMUST00000102409 100 ntBASIC1.85□□□□□ -2.11
Col28a1Q2UY11 Gm15069-201ENSMUST00000117792 192 ntBASIC1.85□□□□□ -2.11
Col28a1Q2UY11 Gm15068-201ENSMUST00000119796 192 ntBASIC1.85□□□□□ -2.11
Col28a1Q2UY11 Gm22490-201ENSMUST00000157188 119 ntBASIC1.85□□□□□ -2.11
Col28a1Q2UY11 Gm25393-201ENSMUST00000157336 285 ntBASIC1.85□□□□□ -2.11
Col28a1Q2UY11 Gm24718-201ENSMUST00000157521 136 ntBASIC1.85□□□□□ -2.11
Col28a1Q2UY11 Gm24394-201ENSMUST00000158141 123 ntBASIC1.85□□□□□ -2.11
Col28a1Q2UY11 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Col28a1Q2UY11 Gm27898-201ENSMUST00000183987 80 ntBASIC1.85□□□□□ -2.11
Col28a1Q2UY11 Gm44491-201ENSMUST00000196794 96 ntBASIC1.85□□□□□ -2.11
Col28a1Q2UY11 Gm35736-201ENSMUST00000203681 313 ntBASIC1.85□□□□□ -2.11
Col28a1Q2UY11 Gm22306-201ENSMUST00000082692 107 ntBASIC1.85□□□□□ -2.11
Col28a1Q2UY11 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Col28a1Q2UY11 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
Col28a1Q2UY11 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.84□□□□□ -2.11
Col28a1Q2UY11 Gm22004-201ENSMUST00000101884 107 ntBASIC1.84□□□□□ -2.11
Col28a1Q2UY11 Gm26074-201ENSMUST00000104063 129 ntBASIC1.84□□□□□ -2.11
Col28a1Q2UY11 Gm14568-201ENSMUST00000119321 294 ntBASIC1.84□□□□□ -2.11
Col28a1Q2UY11 Gm24632-201ENSMUST00000122770 323 ntBASIC1.84□□□□□ -2.11
Col28a1Q2UY11 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Col28a1Q2UY11 Gm22845-201ENSMUST00000157712 104 ntBASIC1.84□□□□□ -2.11
Col28a1Q2UY11 Gm23859-201ENSMUST00000158383 64 ntBASIC1.84□□□□□ -2.11
Col28a1Q2UY11 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.84□□□□□ -2.11
Col28a1Q2UY11 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.84□□□□□ -2.11
Col28a1Q2UY11 Gm23509-201ENSMUST00000083080 160 ntBASIC1.84□□□□□ -2.11
Col28a1Q2UY11 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Col28a1Q2UY11 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Col28a1Q2UY11 Gm24098-201ENSMUST00000102075 109 ntBASIC1.83□□□□□ -2.12
Col28a1Q2UY11 Gm25381-201ENSMUST00000102078 109 ntBASIC1.83□□□□□ -2.12
Col28a1Q2UY11 Gm23907-201ENSMUST00000104595 189 ntBASIC1.83□□□□□ -2.12
Col28a1Q2UY11 Gm26150-201ENSMUST00000157426 151 ntBASIC1.83□□□□□ -2.12
Col28a1Q2UY11 Gm24559-201ENSMUST00000157519 121 ntBASIC1.83□□□□□ -2.12
Col28a1Q2UY11 Rnu7-201ENSMUST00000158458 62 ntBASIC1.83□□□□□ -2.12
Col28a1Q2UY11 Mir6995-201ENSMUST00000183658 71 ntBASIC1.83□□□□□ -2.12
Col28a1Q2UY11 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.83□□□□□ -2.12
Col28a1Q2UY11 Gm22055-201ENSMUST00000083388 107 ntBASIC1.83□□□□□ -2.12
Col28a1Q2UY11 Mir9-2-201ENSMUST00000083490 72 ntBASIC1.83□□□□□ -2.12
Col28a1Q2UY11 Gm26175-201ENSMUST00000083794 131 ntBASIC1.83□□□□□ -2.12
Col28a1Q2UY11 Gm22723-201ENSMUST00000083820 129 ntBASIC1.83□□□□□ -2.12
Col28a1Q2UY11 Mir489-201ENSMUST00000093599 107 ntBASIC1.83□□□□□ -2.12
Col28a1Q2UY11 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.83□□□□□ -2.12
Col28a1Q2UY11 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col28a1Q2UY11 Gm24171-201ENSMUST00000104126 131 ntBASIC1.82□□□□□ -2.12
Col28a1Q2UY11 Gm15289-201ENSMUST00000117793 244 ntBASIC1.82□□□□□ -2.12
Col28a1Q2UY11 Gm24650-201ENSMUST00000157105 103 ntBASIC1.82□□□□□ -2.12
Col28a1Q2UY11 Gm26345-201ENSMUST00000157534 120 ntBASIC1.82□□□□□ -2.12
Col28a1Q2UY11 Gm24877-201ENSMUST00000158779 116 ntBASIC1.82□□□□□ -2.12
Col28a1Q2UY11 Gm25367-201ENSMUST00000158846 106 ntBASIC1.82□□□□□ -2.12
Col28a1Q2UY11 Gm24656-201ENSMUST00000177548 132 ntBASIC1.82□□□□□ -2.12
Col28a1Q2UY11 Gm44464-201ENSMUST00000198010 138 ntBASIC1.82□□□□□ -2.12
Col28a1Q2UY11 Mir3087-201ENSMUST00000199405 56 ntBASIC1.82□□□□□ -2.12
Col28a1Q2UY11 Gm26168-201ENSMUST00000083787 112 ntBASIC1.82□□□□□ -2.12
Col28a1Q2UY11 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Col28a1Q2UY11 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Col28a1Q2UY11 Gm24478-201ENSMUST00000157439 158 ntBASIC1.81□□□□□ -2.12
Col28a1Q2UY11 Gm23253-201ENSMUST00000157441 104 ntBASIC1.81□□□□□ -2.12
Col28a1Q2UY11 Gm22163-201ENSMUST00000158408 135 ntBASIC1.81□□□□□ -2.12
Col28a1Q2UY11 Gm25711-201ENSMUST00000158633 128 ntBASIC1.81□□□□□ -2.12
Col28a1Q2UY11 Gm25364-201ENSMUST00000158851 107 ntBASIC1.81□□□□□ -2.12
Col28a1Q2UY11 Gm22510-201ENSMUST00000179304 79 ntBASIC1.81□□□□□ -2.12
Col28a1Q2UY11 Gm26336-201ENSMUST00000179449 79 ntBASIC1.81□□□□□ -2.12
Col28a1Q2UY11 Gm26390-201ENSMUST00000179628 79 ntBASIC1.81□□□□□ -2.12
Col28a1Q2UY11 Gm27443-201ENSMUST00000184660 98 ntBASIC1.81□□□□□ -2.12
Col28a1Q2UY11 Gm43324-201ENSMUST00000197482 289 ntBASIC1.81□□□□□ -2.12
Col28a1Q2UY11 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.81□□□□□ -2.12
Col28a1Q2UY11 Gm16976-205ENSMUST00000227324 226 ntBASIC1.81□□□□□ -2.12
Col28a1Q2UY11 Mir93-201ENSMUST00000083593 88 ntBASIC1.81□□□□□ -2.12
Col28a1Q2UY11 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Col28a1Q2UY11 Mir293-201ENSMUST00000104841 80 ntBASIC1.8□□□□□ -2.12
Col28a1Q2UY11 Gm14709-201ENSMUST00000121225 304 ntBASIC1.8□□□□□ -2.12
Col28a1Q2UY11 Gm15281-201ENSMUST00000125181 351 ntBASIC1.8□□□□□ -2.12
Col28a1Q2UY11 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Col28a1Q2UY11 Gm23983-201ENSMUST00000157142 114 ntBASIC1.8□□□□□ -2.12
Col28a1Q2UY11 Gm23090-201ENSMUST00000177331 78 ntBASIC1.8□□□□□ -2.12
Col28a1Q2UY11 Gm28669-201ENSMUST00000188400 100 ntBASIC1.8□□□□□ -2.12
Col28a1Q2UY11 Gm37778-201ENSMUST00000191732 190 ntBASIC1.8□□□□□ -2.12
Col28a1Q2UY11 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 144.7 ms