Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.74□□□□□ -1.97
Col6a1Q04857 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.73□□□□□ -1.97
Col6a1Q04857 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Col6a1Q04857 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Col6a1Q04857 Gm22031-201ENSMUST00000116945 126 ntBASIC2.73□□□□□ -1.97
Col6a1Q04857 Gm14937-201ENSMUST00000119709 208 ntBASIC2.73□□□□□ -1.97
Col6a1Q04857 Gm22796-201ENSMUST00000157234 106 ntBASIC2.73□□□□□ -1.97
Col6a1Q04857 Gm24436-201ENSMUST00000157889 302 ntBASIC2.73□□□□□ -1.97
Col6a1Q04857 Gm24177-201ENSMUST00000158927 131 ntBASIC2.73□□□□□ -1.97
Col6a1Q04857 AC126939.1-201ENSMUST00000224943 226 ntBASIC2.73□□□□□ -1.97
Col6a1Q04857 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.73□□□□□ -1.97
Col6a1Q04857 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
Col6a1Q04857 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Col6a1Q04857 Gm24468-201ENSMUST00000104489 104 ntBASIC2.72□□□□□ -1.97
Col6a1Q04857 Gm22033-201ENSMUST00000116947 90 ntBASIC2.72□□□□□ -1.97
Col6a1Q04857 Mir3083-201ENSMUST00000175377 64 ntBASIC2.72□□□□□ -1.97
Col6a1Q04857 Gm45386-201ENSMUST00000210194 218 ntBASIC2.72□□□□□ -1.97
Col6a1Q04857 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.72□□□□□ -1.97
Col6a1Q04857 Gm25851-201ENSMUST00000082794 107 ntBASIC2.72□□□□□ -1.97
Col6a1Q04857 Gm25627-201ENSMUST00000084003 153 ntBASIC2.72□□□□□ -1.97
Col6a1Q04857 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Col6a1Q04857 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.72□□□□□ -1.97
Col6a1Q04857 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
Col6a1Q04857 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Col6a1Q04857 Gm22535-201ENSMUST00000158174 119 ntBASIC2.71□□□□□ -1.98
Col6a1Q04857 Gm26406-201ENSMUST00000158503 124 ntBASIC2.71□□□□□ -1.98
Col6a1Q04857 Mir1931-201ENSMUST00000158589 119 ntBASIC2.71□□□□□ -1.98
Col6a1Q04857 Gm27446-201ENSMUST00000183963 89 ntBASIC2.71□□□□□ -1.98
Col6a1Q04857 Gm43206-201ENSMUST00000197990 114 ntBASIC2.71□□□□□ -1.98
Col6a1Q04857 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.7□□□□□ -1.98
Col6a1Q04857 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
Col6a1Q04857 Gm24049-201ENSMUST00000102409 100 ntBASIC2.7□□□□□ -1.98
Col6a1Q04857 Gm25094-201ENSMUST00000103992 131 ntBASIC2.7□□□□□ -1.98
Col6a1Q04857 Gm12941-201ENSMUST00000117934 220 ntBASIC2.7□□□□□ -1.98
Col6a1Q04857 Gm16265-201ENSMUST00000134558 108 ntBASIC2.7□□□□□ -1.98
Col6a1Q04857 Gm24913-201ENSMUST00000157286 107 ntBASIC2.7□□□□□ -1.98
Col6a1Q04857 Gm26415-201ENSMUST00000157673 292 ntBASIC2.7□□□□□ -1.98
Col6a1Q04857 Gm28270-201ENSMUST00000188550 109 ntBASIC2.7□□□□□ -1.98
Col6a1Q04857 Gm28328-201ENSMUST00000188869 109 ntBASIC2.7□□□□□ -1.98
Col6a1Q04857 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.7□□□□□ -1.98
Col6a1Q04857 CT571266.1-201ENSMUST00000222859 153 ntBASIC2.7□□□□□ -1.98
Col6a1Q04857 Mir410-201ENSMUST00000083563 81 ntBASIC2.7□□□□□ -1.98
Col6a1Q04857 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.69□□□□□ -1.98
Col6a1Q04857 Gm22279-201ENSMUST00000157200 93 ntBASIC2.69□□□□□ -1.98
Col6a1Q04857 Mir3094-201ENSMUST00000175121 64 ntBASIC2.69□□□□□ -1.98
Col6a1Q04857 Gm24572-201ENSMUST00000175505 88 ntBASIC2.69□□□□□ -1.98
Col6a1Q04857 Mir6377-201ENSMUST00000183760 114 ntBASIC2.69□□□□□ -1.98
Col6a1Q04857 Mir7225-201ENSMUST00000184178 54 ntBASIC2.69□□□□□ -1.98
Col6a1Q04857 Mir7215-201ENSMUST00000200383 51 ntBASIC2.69□□□□□ -1.98
Col6a1Q04857 Gm18346-201ENSMUST00000216782 325 ntBASIC2.69□□□□□ -1.98
Col6a1Q04857 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.69□□□□□ -1.98
Col6a1Q04857 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC2.68□□□□□ -1.98
Col6a1Q04857 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
Col6a1Q04857 Gm24907-201ENSMUST00000116932 128 ntBASIC2.68□□□□□ -1.98
Col6a1Q04857 Gm22731-201ENSMUST00000158086 94 ntBASIC2.68□□□□□ -1.98
Col6a1Q04857 Gm22947-201ENSMUST00000158559 91 ntBASIC2.68□□□□□ -1.98
Col6a1Q04857 Mir6353-201ENSMUST00000183596 113 ntBASIC2.68□□□□□ -1.98
Col6a1Q04857 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC2.68□□□□□ -1.98
Col6a1Q04857 AC124687.1-201ENSMUST00000221868 189 ntBASIC2.68□□□□□ -1.98
Col6a1Q04857 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.68□□□□□ -1.98
Col6a1Q04857 Gm24038-201ENSMUST00000082872 159 ntBASIC2.68□□□□□ -1.98
Col6a1Q04857 Gm26326-201ENSMUST00000083070 129 ntBASIC2.68□□□□□ -1.98
Col6a1Q04857 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.68□□□□□ -1.98
Col6a1Q04857 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.67□□□□□ -1.98
Col6a1Q04857 Gm23652-201ENSMUST00000116752 107 ntBASIC2.67□□□□□ -1.98
Col6a1Q04857 Gm25289-201ENSMUST00000122799 119 ntBASIC2.67□□□□□ -1.98
Col6a1Q04857 Mir3961-201ENSMUST00000198795 59 ntBASIC2.67□□□□□ -1.98
Col6a1Q04857 Snord104-201ENSMUST00000083192 70 ntBASIC2.67□□□□□ -1.98
Col6a1Q04857 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
Col6a1Q04857 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Col6a1Q04857 Gm25113-201ENSMUST00000157185 143 ntBASIC2.66□□□□□ -1.98
Col6a1Q04857 Gm26411-201ENSMUST00000157668 107 ntBASIC2.66□□□□□ -1.98
Col6a1Q04857 Gm22638-201ENSMUST00000179674 107 ntBASIC2.66□□□□□ -1.98
Col6a1Q04857 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.66□□□□□ -1.98
Col6a1Q04857 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Col6a1Q04857 Gm23390-201ENSMUST00000157393 106 ntBASIC2.65□□□□□ -1.99
Col6a1Q04857 Gm25884-201ENSMUST00000157782 62 ntBASIC2.65□□□□□ -1.99
Col6a1Q04857 Snord50a-201ENSMUST00000178154 72 ntBASIC2.65□□□□□ -1.99
Col6a1Q04857 Gm24463-201ENSMUST00000178417 72 ntBASIC2.65□□□□□ -1.99
Col6a1Q04857 Mir6376-201ENSMUST00000185149 131 ntBASIC2.65□□□□□ -1.99
Col6a1Q04857 Gm37579-201ENSMUST00000194291 142 ntBASIC2.65□□□□□ -1.99
Col6a1Q04857 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.65□□□□□ -1.99
Col6a1Q04857 Mir497-201ENSMUST00000200557 84 ntBASIC2.65□□□□□ -1.99
Col6a1Q04857 Gm6109-201ENSMUST00000223297 348 ntBASIC2.65□□□□□ -1.99
Col6a1Q04857 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Col6a1Q04857 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.65□□□□□ -1.99
Col6a1Q04857 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Col6a1Q04857 Gm26077-201ENSMUST00000104064 123 ntBASIC2.64□□□□□ -1.99
Col6a1Q04857 Gm23010-201ENSMUST00000104151 126 ntBASIC2.64□□□□□ -1.99
Col6a1Q04857 Gm25996-201ENSMUST00000175393 117 ntBASIC2.64□□□□□ -1.99
Col6a1Q04857 Gm27878-201ENSMUST00000184000 106 ntBASIC2.64□□□□□ -1.99
Col6a1Q04857 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC2.64□□□□□ -1.99
Col6a1Q04857 Gm23507-201ENSMUST00000083078 107 ntBASIC2.64□□□□□ -1.99
Col6a1Q04857 Gm22866-201ENSMUST00000083947 177 ntBASIC2.64□□□□□ -1.99
Col6a1Q04857 Snora33-201ENSMUST00000093556 129 ntBASIC2.64□□□□□ -1.99
Col6a1Q04857 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.64□□□□□ -1.99
Col6a1Q04857 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
Col6a1Q04857 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Col6a1Q04857 Gm11792-201ENSMUST00000120640 168 ntBASIC2.63□□□□□ -1.99
Col6a1Q04857 Gm14947-201ENSMUST00000133704 303 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms