Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm22319-201ENSMUST00000157147 122 ntBASIC2.19□□□□□ -2.06
Col8a1Q00780 Gm22387-201ENSMUST00000158191 131 ntBASIC2.19□□□□□ -2.06
Col8a1Q00780 Gm22770-201ENSMUST00000158368 67 ntBASIC2.19□□□□□ -2.06
Col8a1Q00780 Gm24177-201ENSMUST00000158927 131 ntBASIC2.19□□□□□ -2.06
Col8a1Q00780 Gm25470-201ENSMUST00000175576 111 ntBASIC2.19□□□□□ -2.06
Col8a1Q00780 Gm5224-201ENSMUST00000183060 350 ntBASIC2.19□□□□□ -2.06
Col8a1Q00780 Gm25627-201ENSMUST00000084003 153 ntBASIC2.19□□□□□ -2.06
Col8a1Q00780 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Col8a1Q00780 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Col8a1Q00780 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Col8a1Q00780 Gm23060-201ENSMUST00000102345 109 ntBASIC2.18□□□□□ -2.06
Col8a1Q00780 Gm25112-201ENSMUST00000122680 104 ntBASIC2.18□□□□□ -2.06
Col8a1Q00780 Gm22279-201ENSMUST00000157200 93 ntBASIC2.18□□□□□ -2.06
Col8a1Q00780 Gm24250-201ENSMUST00000157320 135 ntBASIC2.18□□□□□ -2.06
Col8a1Q00780 Rnu7-201ENSMUST00000158458 62 ntBASIC2.18□□□□□ -2.06
Col8a1Q00780 Gm23409-201ENSMUST00000158516 237 ntBASIC2.18□□□□□ -2.06
Col8a1Q00780 Gm23770-201ENSMUST00000178009 108 ntBASIC2.18□□□□□ -2.06
Col8a1Q00780 Gm22832-201ENSMUST00000178022 108 ntBASIC2.18□□□□□ -2.06
Col8a1Q00780 Gm23863-201ENSMUST00000178265 108 ntBASIC2.18□□□□□ -2.06
Col8a1Q00780 Gm24828-201ENSMUST00000178507 108 ntBASIC2.18□□□□□ -2.06
Col8a1Q00780 Gm23052-201ENSMUST00000178633 108 ntBASIC2.18□□□□□ -2.06
Col8a1Q00780 Gm25729-201ENSMUST00000179050 108 ntBASIC2.18□□□□□ -2.06
Col8a1Q00780 Gm25359-201ENSMUST00000179315 108 ntBASIC2.18□□□□□ -2.06
Col8a1Q00780 Gm22624-201ENSMUST00000179913 108 ntBASIC2.18□□□□□ -2.06
Col8a1Q00780 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col8a1Q00780 Gm18346-201ENSMUST00000216782 325 ntBASIC2.18□□□□□ -2.06
Col8a1Q00780 Snora41-201ENSMUST00000082668 132 ntBASIC2.18□□□□□ -2.06
Col8a1Q00780 Gm24536-201ENSMUST00000083144 107 ntBASIC2.18□□□□□ -2.06
Col8a1Q00780 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col8a1Q00780 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Col8a1Q00780 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col8a1Q00780 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col8a1Q00780 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col8a1Q00780 Gm22658-201ENSMUST00000104196 155 ntBASIC2.17□□□□□ -2.06
Col8a1Q00780 Mir293-201ENSMUST00000104841 80 ntBASIC2.17□□□□□ -2.06
Col8a1Q00780 Gm26345-201ENSMUST00000157534 120 ntBASIC2.17□□□□□ -2.06
Col8a1Q00780 Gm22330-201ENSMUST00000158068 115 ntBASIC2.17□□□□□ -2.06
Col8a1Q00780 Gm23223-201ENSMUST00000158119 127 ntBASIC2.17□□□□□ -2.06
Col8a1Q00780 Gm24946-201ENSMUST00000158332 106 ntBASIC2.17□□□□□ -2.06
Col8a1Q00780 Snord53-201ENSMUST00000175146 78 ntBASIC2.17□□□□□ -2.06
Col8a1Q00780 Gm23090-201ENSMUST00000177331 78 ntBASIC2.17□□□□□ -2.06
Col8a1Q00780 AC122327.1-201ENSMUST00000220778 108 ntBASIC2.17□□□□□ -2.06
Col8a1Q00780 Mir34a-201ENSMUST00000083559 102 ntBASIC2.17□□□□□ -2.06
Col8a1Q00780 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.17□□□□□ -2.06
Col8a1Q00780 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Col8a1Q00780 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.16□□□□□ -2.06
Col8a1Q00780 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.16□□□□□ -2.06
Col8a1Q00780 Gm24280-201ENSMUST00000104237 134 ntBASIC2.16□□□□□ -2.06
Col8a1Q00780 Gm22963-201ENSMUST00000157960 91 ntBASIC2.16□□□□□ -2.06
Col8a1Q00780 Gm20409-201ENSMUST00000173457 130 ntBASIC2.16□□□□□ -2.06
Col8a1Q00780 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC2.16□□□□□ -2.06
Col8a1Q00780 Gm37007-201ENSMUST00000194234 319 ntBASIC2.16□□□□□ -2.06
Col8a1Q00780 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Col8a1Q00780 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Col8a1Q00780 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.06
Col8a1Q00780 Gm25090-201ENSMUST00000104000 132 ntBASIC2.15□□□□□ -2.07
Col8a1Q00780 Gm22545-201ENSMUST00000104350 132 ntBASIC2.15□□□□□ -2.07
Col8a1Q00780 Gm14923-201ENSMUST00000118270 155 ntBASIC2.15□□□□□ -2.07
Col8a1Q00780 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.15□□□□□ -2.07
Col8a1Q00780 Gm25382-201ENSMUST00000157811 97 ntBASIC2.15□□□□□ -2.07
Col8a1Q00780 Gm23083-201ENSMUST00000157851 116 ntBASIC2.15□□□□□ -2.07
Col8a1Q00780 Gm23384-201ENSMUST00000158593 103 ntBASIC2.15□□□□□ -2.07
Col8a1Q00780 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.15□□□□□ -2.07
Col8a1Q00780 Gm24524-201ENSMUST00000082925 170 ntBASIC2.15□□□□□ -2.07
Col8a1Q00780 Snord118-201ENSMUST00000082965 135 ntBASIC2.15□□□□□ -2.07
Col8a1Q00780 Gm25628-201ENSMUST00000084002 105 ntBASIC2.15□□□□□ -2.07
Col8a1Q00780 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Col8a1Q00780 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.14□□□□□ -2.07
Col8a1Q00780 Gm22486-201ENSMUST00000116815 137 ntBASIC2.14□□□□□ -2.07
Col8a1Q00780 Gm6954-201ENSMUST00000117416 225 ntBASIC2.14□□□□□ -2.07
Col8a1Q00780 Gm23980-201ENSMUST00000157135 158 ntBASIC2.14□□□□□ -2.07
Col8a1Q00780 Gm22332-201ENSMUST00000158072 126 ntBASIC2.14□□□□□ -2.07
Col8a1Q00780 Gm23898-201ENSMUST00000158111 103 ntBASIC2.14□□□□□ -2.07
Col8a1Q00780 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.14□□□□□ -2.07
Col8a1Q00780 AC166341.8-201ENSMUST00000221267 108 ntBASIC2.14□□□□□ -2.07
Col8a1Q00780 Snora33-201ENSMUST00000093556 129 ntBASIC2.14□□□□□ -2.07
Col8a1Q00780 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Col8a1Q00780 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.13□□□□□ -2.07
Col8a1Q00780 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.13□□□□□ -2.07
Col8a1Q00780 Gm24649-201ENSMUST00000157106 134 ntBASIC2.13□□□□□ -2.07
Col8a1Q00780 Gm22947-201ENSMUST00000158559 91 ntBASIC2.13□□□□□ -2.07
Col8a1Q00780 Gm23289-201ENSMUST00000175615 108 ntBASIC2.13□□□□□ -2.07
Col8a1Q00780 Gm19257-201ENSMUST00000186121 183 ntBASIC2.13□□□□□ -2.07
Col8a1Q00780 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Col8a1Q00780 Gm45544-201ENSMUST00000211130 88 ntBASIC2.13□□□□□ -2.07
Col8a1Q00780 Gm26458-201ENSMUST00000082832 128 ntBASIC2.13□□□□□ -2.07
Col8a1Q00780 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
Col8a1Q00780 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.13□□□□□ -2.07
Col8a1Q00780 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.13□□□□□ -2.07
Col8a1Q00780 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.12□□□□□ -2.07
Col8a1Q00780 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
Col8a1Q00780 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Col8a1Q00780 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
Col8a1Q00780 Gm25610-201ENSMUST00000104016 129 ntBASIC2.12□□□□□ -2.07
Col8a1Q00780 Gm23010-201ENSMUST00000104151 126 ntBASIC2.12□□□□□ -2.07
Col8a1Q00780 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.12□□□□□ -2.07
Col8a1Q00780 Gm24475-201ENSMUST00000157435 143 ntBASIC2.12□□□□□ -2.07
Col8a1Q00780 Gm25884-201ENSMUST00000157782 62 ntBASIC2.12□□□□□ -2.07
Col8a1Q00780 Gm25371-201ENSMUST00000158162 101 ntBASIC2.12□□□□□ -2.07
Col8a1Q00780 Mir6353-201ENSMUST00000183596 113 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 163.8 ms