Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.37□□□□□ -2.35
Nkx3-1P97436 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.37□□□□□ -2.35
Nkx3-1P97436 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
Nkx3-1P97436 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.36□□□□□ -2.35
Nkx3-1P97436 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Nkx3-1P97436 Mir466f-2-201ENSMUST00000104805 94 ntBASIC0.36□□□□□ -2.35
Nkx3-1P97436 Gm14884-201ENSMUST00000120456 196 ntBASIC0.36□□□□□ -2.35
Nkx3-1P97436 Gm14919-201ENSMUST00000120839 390 ntBASIC0.36□□□□□ -2.35
Nkx3-1P97436 Mir3079-201ENSMUST00000175428 90 ntBASIC0.36□□□□□ -2.35
Nkx3-1P97436 Gm22448-201ENSMUST00000179254 107 ntBASIC0.36□□□□□ -2.35
Nkx3-1P97436 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.36□□□□□ -2.35
Nkx3-1P97436 Gm44488-201ENSMUST00000199467 119 ntBASIC0.36□□□□□ -2.35
Nkx3-1P97436 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.36□□□□□ -2.35
Nkx3-1P97436 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.36□□□□□ -2.35
Nkx3-1P97436 Gm7240-201ENSMUST00000220769 664 ntBASIC0.36□□□□□ -2.35
Nkx3-1P97436 Gm23406-201ENSMUST00000082537 122 ntBASIC0.36□□□□□ -2.35
Nkx3-1P97436 Gm23708-201ENSMUST00000104367 123 ntBASIC0.35□□□□□ -2.35
Nkx3-1P97436 Gm22479-201ENSMUST00000122566 81 ntBASIC0.35□□□□□ -2.35
Nkx3-1P97436 Gm22836-201ENSMUST00000158441 61 ntBASIC0.35□□□□□ -2.35
Nkx3-1P97436 Gm23571-201ENSMUST00000180073 127 ntBASIC0.35□□□□□ -2.35
Nkx3-1P97436 Gm43432-201ENSMUST00000196352 121 ntBASIC0.35□□□□□ -2.35
Nkx3-1P97436 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.35□□□□□ -2.35
Nkx3-1P97436 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.35□□□□□ -2.35
Nkx3-1P97436 DQ267101-201ENSMUST00000082562 73 ntBASIC0.35□□□□□ -2.35
Nkx3-1P97436 Snora20-201ENSMUST00000082703 128 ntBASIC0.35□□□□□ -2.35
Nkx3-1P97436 Gm25793-201ENSMUST00000083287 107 ntBASIC0.35□□□□□ -2.35
Nkx3-1P97436 Gm24453-201ENSMUST00000083346 76 ntBASIC0.35□□□□□ -2.35
Nkx3-1P97436 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Nkx3-1P97436 Mir547-201ENSMUST00000102051 78 ntBASIC0.34□□□□□ -2.36
Nkx3-1P97436 Gm26293-201ENSMUST00000104170 84 ntBASIC0.34□□□□□ -2.36
Nkx3-1P97436 Gm25875-201ENSMUST00000104323 107 ntBASIC0.34□□□□□ -2.36
Nkx3-1P97436 Gm26303-201ENSMUST00000116845 119 ntBASIC0.34□□□□□ -2.36
Nkx3-1P97436 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.34□□□□□ -2.36
Nkx3-1P97436 Gm22796-201ENSMUST00000157234 106 ntBASIC0.34□□□□□ -2.36
Nkx3-1P97436 Gm22522-201ENSMUST00000158271 151 ntBASIC0.34□□□□□ -2.36
Nkx3-1P97436 Gm25838-201ENSMUST00000158920 120 ntBASIC0.34□□□□□ -2.36
Nkx3-1P97436 Gm27845-201ENSMUST00000184479 114 ntBASIC0.34□□□□□ -2.36
Nkx3-1P97436 Mir500-201ENSMUST00000093600 92 ntBASIC0.34□□□□□ -2.36
Nkx3-1P97436 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
Nkx3-1P97436 Gm13801-201ENSMUST00000120750 160 ntBASIC0.33□□□□□ -2.36
Nkx3-1P97436 Gm14671-201ENSMUST00000121790 262 ntBASIC0.33□□□□□ -2.36
Nkx3-1P97436 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.33□□□□□ -2.36
Nkx3-1P97436 Gm25424-201ENSMUST00000157612 58 ntBASIC0.33□□□□□ -2.36
Nkx3-1P97436 Gm22553-201ENSMUST00000157797 295 ntBASIC0.33□□□□□ -2.36
Nkx3-1P97436 Gm26090-201ENSMUST00000157897 128 ntBASIC0.33□□□□□ -2.36
Nkx3-1P97436 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.33□□□□□ -2.36
Nkx3-1P97436 Gm25024-201ENSMUST00000179667 104 ntBASIC0.33□□□□□ -2.36
Nkx3-1P97436 Gm27521-201ENSMUST00000184022 64 ntBASIC0.33□□□□□ -2.36
Nkx3-1P97436 Gm27980-201ENSMUST00000184094 169 ntBASIC0.33□□□□□ -2.36
Nkx3-1P97436 Gm28849-201ENSMUST00000188127 174 ntBASIC0.33□□□□□ -2.36
Nkx3-1P97436 Gm44464-201ENSMUST00000198010 138 ntBASIC0.33□□□□□ -2.36
Nkx3-1P97436 Gm44055-201ENSMUST00000204376 247 ntBASIC0.33□□□□□ -2.36
Nkx3-1P97436 Gm44057-201ENSMUST00000204547 96 ntBASIC0.33□□□□□ -2.36
Nkx3-1P97436 Gm45544-201ENSMUST00000211130 88 ntBASIC0.33□□□□□ -2.36
Nkx3-1P97436 Gm8219-201ENSMUST00000218309 242 ntBASIC0.33□□□□□ -2.36
Nkx3-1P97436 Gm25138-201ENSMUST00000083248 136 ntBASIC0.33□□□□□ -2.36
Nkx3-1P97436 Gm24616-201ENSMUST00000083274 139 ntBASIC0.33□□□□□ -2.36
Nkx3-1P97436 Gm22759-201ENSMUST00000102276 96 ntBASIC0.32□□□□□ -2.36
Nkx3-1P97436 Gm22784-201ENSMUST00000104088 132 ntBASIC0.32□□□□□ -2.36
Nkx3-1P97436 Gm25378-201ENSMUST00000104333 129 ntBASIC0.32□□□□□ -2.36
Nkx3-1P97436 Gm14906-201ENSMUST00000119265 390 ntBASIC0.32□□□□□ -2.36
Nkx3-1P97436 Gm24392-201ENSMUST00000158136 103 ntBASIC0.32□□□□□ -2.36
Nkx3-1P97436 Gm24667-201ENSMUST00000158938 103 ntBASIC0.32□□□□□ -2.36
Nkx3-1P97436 Gm22118-201ENSMUST00000175593 171 ntBASIC0.32□□□□□ -2.36
Nkx3-1P97436 Mir6389-201ENSMUST00000183661 102 ntBASIC0.32□□□□□ -2.36
Nkx3-1P97436 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.32□□□□□ -2.36
Nkx3-1P97436 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
Nkx3-1P97436 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.32□□□□□ -2.36
Nkx3-1P97436 Gm24208-201ENSMUST00000082783 135 ntBASIC0.32□□□□□ -2.36
Nkx3-1P97436 Gm23969-201ENSMUST00000083324 74 ntBASIC0.32□□□□□ -2.36
Nkx3-1P97436 Mir101a-201ENSMUST00000083517 83 ntBASIC0.32□□□□□ -2.36
Nkx3-1P97436 Mir224-201ENSMUST00000083608 82 ntBASIC0.32□□□□□ -2.36
Nkx3-1P97436 Gm25318-201ENSMUST00000122554 314 ntBASIC0.31□□□□□ -2.36
Nkx3-1P97436 Gm25375-201ENSMUST00000158157 135 ntBASIC0.31□□□□□ -2.36
Nkx3-1P97436 Gm26287-201ENSMUST00000158887 81 ntBASIC0.31□□□□□ -2.36
Nkx3-1P97436 Mir6364-201ENSMUST00000183396 86 ntBASIC0.31□□□□□ -2.36
Nkx3-1P97436 Mir6377-201ENSMUST00000183760 114 ntBASIC0.31□□□□□ -2.36
Nkx3-1P97436 Mir7077-201ENSMUST00000183991 57 ntBASIC0.31□□□□□ -2.36
Nkx3-1P97436 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.31□□□□□ -2.36
Nkx3-1P97436 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.31□□□□□ -2.36
Nkx3-1P97436 mt-Tr-201ENSMUST00000082412 68 ntBASIC0.31□□□□□ -2.36
Nkx3-1P97436 Gm26497-201ENSMUST00000083146 107 ntBASIC0.31□□□□□ -2.36
Nkx3-1P97436 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.31□□□□□ -2.36
Nkx3-1P97436 Gm23345-201ENSMUST00000083817 150 ntBASIC0.31□□□□□ -2.36
Nkx3-1P97436 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.31□□□□□ -2.36
Nkx3-1P97436 Gm12837-201ENSMUST00000120131 373 ntBASIC0.3□□□□□ -2.36
Nkx3-1P97436 Gm25828-201ENSMUST00000157087 95 ntBASIC0.3□□□□□ -2.36
Nkx3-1P97436 Gm22706-201ENSMUST00000157907 112 ntBASIC0.3□□□□□ -2.36
Nkx3-1P97436 Gm22801-201ENSMUST00000175624 84 ntBASIC0.3□□□□□ -2.36
Nkx3-1P97436 Gm36189-201ENSMUST00000204113 523 ntBASIC0.3□□□□□ -2.36
Nkx3-1P97436 Gm45313-201ENSMUST00000210584 178 ntBASIC0.3□□□□□ -2.36
Nkx3-1P97436 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.3□□□□□ -2.36
Nkx3-1P97436 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.3□□□□□ -2.36
Nkx3-1P97436 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
Nkx3-1P97436 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.29□□□□□ -2.36
Nkx3-1P97436 Gm24594-201ENSMUST00000122502 99 ntBASIC0.29□□□□□ -2.36
Nkx3-1P97436 Gm24559-201ENSMUST00000157519 121 ntBASIC0.29□□□□□ -2.36
Nkx3-1P97436 Gm26484-201ENSMUST00000158018 106 ntBASIC0.29□□□□□ -2.36
Nkx3-1P97436 Gm16307-201ENSMUST00000161269 210 ntBASIC0.29□□□□□ -2.36
Nkx3-1P97436 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms