Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm13341-201ENSMUST00000120780 672 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-0.3□□□□□ -2.46
Nphp4P59240 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Gm44057-201ENSMUST00000204547 96 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Gm44811-201ENSMUST00000209120 228 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Gm23404-201ENSMUST00000082543 97 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Gm22656-201ENSMUST00000104199 171 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Gm24629-201ENSMUST00000122762 89 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Gm24847-201ENSMUST00000158032 108 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Gm24728-201ENSMUST00000158226 125 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
Nphp4P59240 Gm23148-201ENSMUST00000180367 107 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Gm10105-201ENSMUST00000184601 270 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Gm28597-201ENSMUST00000187664 666 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Mir7661-201ENSMUST00000197023 61 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Gm42857-201ENSMUST00000200823 339 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Gm23625-201ENSMUST00000082457 100 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Gm25258-201ENSMUST00000083049 107 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Mir18-201ENSMUST00000083469 96 ntBASIC-0.3□□□□□ -2.46
Nphp4P59240 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.31□□□□□ -2.46
Nphp4P59240 Gm25444-201ENSMUST00000158999 113 ntBASIC-0.31□□□□□ -2.46
Nphp4P59240 Gm27410-201ENSMUST00000183851 115 ntBASIC-0.31□□□□□ -2.46
Nphp4P59240 AC116589.3-202ENSMUST00000221770 649 ntBASIC-0.31□□□□□ -2.46
Nphp4P59240 AC116589.6-201ENSMUST00000222252 649 ntBASIC-0.31□□□□□ -2.46
Nphp4P59240 Gm15719-201ENSMUST00000120619 635 ntBASIC-0.32□□□□□ -2.46
Nphp4P59240 Gm24509-201ENSMUST00000157086 101 ntBASIC-0.32□□□□□ -2.46
Nphp4P59240 Gm25559-201ENSMUST00000157182 74 ntBASIC-0.32□□□□□ -2.46
Nphp4P59240 Gm25358-201ENSMUST00000157189 101 ntBASIC-0.32□□□□□ -2.46
Nphp4P59240 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.32□□□□□ -2.46
Nphp4P59240 Gm22387-201ENSMUST00000158191 131 ntBASIC-0.32□□□□□ -2.46
Nphp4P59240 Gm22841-201ENSMUST00000158443 62 ntBASIC-0.32□□□□□ -2.46
Nphp4P59240 Gm23660-201ENSMUST00000178362 79 ntBASIC-0.32□□□□□ -2.46
Nphp4P59240 Gm25671-201ENSMUST00000178612 105 ntBASIC-0.32□□□□□ -2.46
Nphp4P59240 Gm24088-201ENSMUST00000179100 79 ntBASIC-0.32□□□□□ -2.46
Nphp4P59240 Gm23307-201ENSMUST00000179167 105 ntBASIC-0.32□□□□□ -2.46
Nphp4P59240 Gm25286-201ENSMUST00000179790 105 ntBASIC-0.32□□□□□ -2.46
Nphp4P59240 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
Nphp4P59240 Gm25078-201ENSMUST00000082530 107 ntBASIC-0.32□□□□□ -2.46
Nphp4P59240 Gm23301-201ENSMUST00000082713 65 ntBASIC-0.32□□□□□ -2.46
Nphp4P59240 Gm24043-201ENSMUST00000083108 116 ntBASIC-0.32□□□□□ -2.46
Nphp4P59240 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.32□□□□□ -2.46
Nphp4P59240 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.33□□□□□ -2.46
Nphp4P59240 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-0.33□□□□□ -2.46
Nphp4P59240 Gm13059-201ENSMUST00000119881 398 ntBASIC-0.33□□□□□ -2.46
Nphp4P59240 Gm23921-201ENSMUST00000175258 107 ntBASIC-0.33□□□□□ -2.46
Nphp4P59240 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC-0.33□□□□□ -2.46
Nphp4P59240 Gm28330-201ENSMUST00000190353 171 ntBASIC-0.33□□□□□ -2.46
Nphp4P59240 Mir376a-201ENSMUST00000197584 68 ntBASIC-0.33□□□□□ -2.46
Nphp4P59240 Gm44464-201ENSMUST00000198010 138 ntBASIC-0.33□□□□□ -2.46
Nphp4P59240 Mir721-201ENSMUST00000200230 88 ntBASIC-0.33□□□□□ -2.46
Nphp4P59240 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC-0.33□□□□□ -2.46
Nphp4P59240 AC153541.1-201ENSMUST00000213786 294 ntBASIC-0.33□□□□□ -2.46
Nphp4P59240 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.33□□□□□ -2.46
Nphp4P59240 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.33□□□□□ -2.46
Nphp4P59240 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.33□□□□□ -2.46
Nphp4P59240 Mir532-201ENSMUST00000093630 96 ntBASIC-0.33□□□□□ -2.46
Nphp4P59240 Gm23191-201ENSMUST00000179147 107 ntBASIC-0.34□□□□□ -2.46
Nphp4P59240 AC102369.1-201ENSMUST00000218415 373 ntBASIC-0.34□□□□□ -2.46
Nphp4P59240 Gm26107-201ENSMUST00000083972 107 ntBASIC-0.34□□□□□ -2.46
Nphp4P59240 Gm26329-201ENSMUST00000093723 110 ntBASIC-0.34□□□□□ -2.46
Nphp4P59240 Gm15899-201ENSMUST00000128586 238 ntBASIC-0.35□□□□□ -2.47
Nphp4P59240 Gm22814-201ENSMUST00000157452 104 ntBASIC-0.35□□□□□ -2.47
Nphp4P59240 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.35□□□□□ -2.47
Nphp4P59240 Gm25241-201ENSMUST00000174909 84 ntBASIC-0.35□□□□□ -2.47
Nphp4P59240 Gm26217-201ENSMUST00000175212 84 ntBASIC-0.35□□□□□ -2.47
Nphp4P59240 Gm25450-201ENSMUST00000179144 107 ntBASIC-0.35□□□□□ -2.47
Nphp4P59240 Gm27919-201ENSMUST00000185163 107 ntBASIC-0.35□□□□□ -2.47
Nphp4P59240 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.35□□□□□ -2.47
Nphp4P59240 AC115735.2-201ENSMUST00000227135 351 ntBASIC-0.35□□□□□ -2.47
Nphp4P59240 Mir377-201ENSMUST00000083504 68 ntBASIC-0.35□□□□□ -2.47
Nphp4P59240 Gm23536-201ENSMUST00000157541 134 ntBASIC-0.36□□□□□ -2.47
Nphp4P59240 Gm24438-201ENSMUST00000157893 115 ntBASIC-0.36□□□□□ -2.47
Nphp4P59240 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.36□□□□□ -2.47
Nphp4P59240 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.36□□□□□ -2.47
Nphp4P59240 Gm22421-201ENSMUST00000083058 107 ntBASIC-0.36□□□□□ -2.47
Nphp4P59240 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-0.36□□□□□ -2.47
Nphp4P59240 Mir496a-201ENSMUST00000093627 79 ntBASIC-0.36□□□□□ -2.47
Nphp4P59240 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.36□□□□□ -2.47
Nphp4P59240 Mir574-201ENSMUST00000103854 78 ntBASIC-0.37□□□□□ -2.47
Nphp4P59240 Gm24372-201ENSMUST00000104400 110 ntBASIC-0.37□□□□□ -2.47
Nphp4P59240 Gm26011-201ENSMUST00000104410 104 ntBASIC-0.37□□□□□ -2.47
Nphp4P59240 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-0.37□□□□□ -2.47
Nphp4P59240 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-0.37□□□□□ -2.47
Nphp4P59240 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.37□□□□□ -2.47
Nphp4P59240 Gm12785-201ENSMUST00000122052 172 ntBASIC-0.37□□□□□ -2.47
Nphp4P59240 Gm24634-201ENSMUST00000158672 107 ntBASIC-0.37□□□□□ -2.47
Nphp4P59240 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.37□□□□□ -2.47
Nphp4P59240 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
Nphp4P59240 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.37□□□□□ -2.47
Nphp4P59240 AC132615.1-201ENSMUST00000213873 255 ntBASIC-0.37□□□□□ -2.47
Nphp4P59240 Snora75-201ENSMUST00000082903 133 ntBASIC-0.37□□□□□ -2.47
Nphp4P59240 Gm26123-201ENSMUST00000083363 135 ntBASIC-0.37□□□□□ -2.47
Nphp4P59240 Gm25538-201ENSMUST00000101943 107 ntBASIC-0.38□□□□□ -2.47
Nphp4P59240 Gm24296-201ENSMUST00000158297 106 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 150.8 ms