Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm12086-201ENSMUST00000120863 228 ntBASIC1.39□□□□□ -2.19
Nkx2-1P50220 Gm25423-201ENSMUST00000157609 107 ntBASIC1.39□□□□□ -2.19
Nkx2-1P50220 Gm24747-201ENSMUST00000157835 87 ntBASIC1.39□□□□□ -2.19
Nkx2-1P50220 Gm22212-201ENSMUST00000158096 106 ntBASIC1.39□□□□□ -2.19
Nkx2-1P50220 Gm23208-201ENSMUST00000158666 127 ntBASIC1.39□□□□□ -2.19
Nkx2-1P50220 Gm26160-201ENSMUST00000158965 63 ntBASIC1.39□□□□□ -2.19
Nkx2-1P50220 Mir6351-201ENSMUST00000183826 99 ntBASIC1.39□□□□□ -2.19
Nkx2-1P50220 Gm44326-201ENSMUST00000198226 101 ntBASIC1.39□□□□□ -2.19
Nkx2-1P50220 AC160962.3-201ENSMUST00000225914 112 ntBASIC1.39□□□□□ -2.19
Nkx2-1P50220 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.39□□□□□ -2.19
Nkx2-1P50220 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.39□□□□□ -2.19
Nkx2-1P50220 Mir186-201ENSMUST00000083497 71 ntBASIC1.39□□□□□ -2.19
Nkx2-1P50220 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Nkx2-1P50220 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.39□□□□□ -2.19
Nkx2-1P50220 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.39□□□□□ -2.19
Nkx2-1P50220 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Nkx2-1P50220 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.38□□□□□ -2.19
Nkx2-1P50220 Gm22031-201ENSMUST00000116945 126 ntBASIC1.38□□□□□ -2.19
Nkx2-1P50220 Gm13560-201ENSMUST00000121865 329 ntBASIC1.38□□□□□ -2.19
Nkx2-1P50220 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.38□□□□□ -2.19
Nkx2-1P50220 Gm22227-201ENSMUST00000157356 259 ntBASIC1.38□□□□□ -2.19
Nkx2-1P50220 Gm25882-201ENSMUST00000157784 85 ntBASIC1.38□□□□□ -2.19
Nkx2-1P50220 Mir3103-201ENSMUST00000175474 67 ntBASIC1.38□□□□□ -2.19
Nkx2-1P50220 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Nkx2-1P50220 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.38□□□□□ -2.19
Nkx2-1P50220 Gm22509-201ENSMUST00000082775 107 ntBASIC1.38□□□□□ -2.19
Nkx2-1P50220 Gm44489-201ENSMUST00000104619 97 ntBASIC1.37□□□□□ -2.19
Nkx2-1P50220 Gm25828-201ENSMUST00000157087 95 ntBASIC1.37□□□□□ -2.19
Nkx2-1P50220 Gm22490-201ENSMUST00000157188 119 ntBASIC1.37□□□□□ -2.19
Nkx2-1P50220 Gm22850-201ENSMUST00000157714 82 ntBASIC1.37□□□□□ -2.19
Nkx2-1P50220 Gm23080-201ENSMUST00000157846 103 ntBASIC1.37□□□□□ -2.19
Nkx2-1P50220 Gm23817-201ENSMUST00000158449 104 ntBASIC1.37□□□□□ -2.19
Nkx2-1P50220 Gm25444-201ENSMUST00000158999 113 ntBASIC1.37□□□□□ -2.19
Nkx2-1P50220 Gm22264-201ENSMUST00000178200 107 ntBASIC1.37□□□□□ -2.19
Nkx2-1P50220 Mir669j-201ENSMUST00000179023 121 ntBASIC1.37□□□□□ -2.19
Nkx2-1P50220 Gm27248-201ENSMUST00000184004 166 ntBASIC1.37□□□□□ -2.19
Nkx2-1P50220 Gm27792-201ENSMUST00000184031 115 ntBASIC1.37□□□□□ -2.19
Nkx2-1P50220 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.37□□□□□ -2.19
Nkx2-1P50220 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.37□□□□□ -2.19
Nkx2-1P50220 Gm25684-201ENSMUST00000083941 107 ntBASIC1.37□□□□□ -2.19
Nkx2-1P50220 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Nkx2-1P50220 Mir466-201ENSMUST00000093591 73 ntBASIC1.37□□□□□ -2.19
Nkx2-1P50220 Snord64-201ENSMUST00000104003 67 ntBASIC1.36□□□□□ -2.19
Nkx2-1P50220 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.36□□□□□ -2.19
Nkx2-1P50220 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.36□□□□□ -2.19
Nkx2-1P50220 Gm23170-201ENSMUST00000157158 106 ntBASIC1.36□□□□□ -2.19
Nkx2-1P50220 Gm24262-201ENSMUST00000157431 144 ntBASIC1.36□□□□□ -2.19
Nkx2-1P50220 Gm26360-201ENSMUST00000158872 103 ntBASIC1.36□□□□□ -2.19
Nkx2-1P50220 Gm16584-201ENSMUST00000159267 189 ntBASIC1.36□□□□□ -2.19
Nkx2-1P50220 Gm43898-201ENSMUST00000204456 424 ntBASIC1.36□□□□□ -2.19
Nkx2-1P50220 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.36□□□□□ -2.19
Nkx2-1P50220 AC147101.2-201ENSMUST00000219756 184 ntBASIC1.36□□□□□ -2.19
Nkx2-1P50220 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.36□□□□□ -2.19
Nkx2-1P50220 Gm24038-201ENSMUST00000082872 159 ntBASIC1.36□□□□□ -2.19
Nkx2-1P50220 Snord61-201ENSMUST00000083176 71 ntBASIC1.36□□□□□ -2.19
Nkx2-1P50220 Gm26168-201ENSMUST00000083787 112 ntBASIC1.36□□□□□ -2.19
Nkx2-1P50220 Gm25513-201ENSMUST00000083861 162 ntBASIC1.36□□□□□ -2.19
Nkx2-1P50220 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Nkx2-1P50220 BC022960-201ENSMUST00000119987 1815 ntBASIC1.36□□□□□ -2.19
Nkx2-1P50220 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Nkx2-1P50220 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Nkx2-1P50220 Gm24650-201ENSMUST00000157105 103 ntBASIC1.35□□□□□ -2.19
Nkx2-1P50220 Gm22279-201ENSMUST00000157200 93 ntBASIC1.35□□□□□ -2.19
Nkx2-1P50220 Gm25623-201ENSMUST00000157216 108 ntBASIC1.35□□□□□ -2.19
Nkx2-1P50220 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.35□□□□□ -2.19
Nkx2-1P50220 Mir7675-201ENSMUST00000184262 58 ntBASIC1.35□□□□□ -2.19
Nkx2-1P50220 Gm18665-201ENSMUST00000189783 270 ntBASIC1.35□□□□□ -2.19
Nkx2-1P50220 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC1.35□□□□□ -2.19
Nkx2-1P50220 Gm44320-201ENSMUST00000199276 86 ntBASIC1.35□□□□□ -2.19
Nkx2-1P50220 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.35□□□□□ -2.19
Nkx2-1P50220 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.35□□□□□ -2.19
Nkx2-1P50220 Snord14a-201ENSMUST00000082807 87 ntBASIC1.35□□□□□ -2.19
Nkx2-1P50220 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.35□□□□□ -2.19
Nkx2-1P50220 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Nkx2-1P50220 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
Nkx2-1P50220 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Nkx2-1P50220 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Gm26339-201ENSMUST00000102368 99 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Mir653-201ENSMUST00000102402 85 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Mir669d-201ENSMUST00000104644 121 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Gm14626-201ENSMUST00000117619 216 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Gm14947-201ENSMUST00000133704 303 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Gm23718-201ENSMUST00000157350 307 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Gm25267-201ENSMUST00000158522 63 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Gm24366-201ENSMUST00000175383 86 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Gm25380-201ENSMUST00000175463 107 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Gm24926-201ENSMUST00000178053 79 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Gm24641-201ENSMUST00000178055 107 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Gm25484-201ENSMUST00000178217 107 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Gm22632-201ENSMUST00000178266 79 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Gm26138-201ENSMUST00000179236 107 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Gm22821-201ENSMUST00000179288 107 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Mir6997-201ENSMUST00000184313 71 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Mir7226-201ENSMUST00000184953 60 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Mir3969-201ENSMUST00000197106 92 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Gm43324-201ENSMUST00000197482 289 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Gm44921-201ENSMUST00000205290 301 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Gm44962-201ENSMUST00000206460 279 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.34□□□□□ -2.19
Nkx2-1P50220 Gm23140-201ENSMUST00000082487 107 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms