Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm24261-201ENSMUST00000083744 104 ntBASIC2.23□□□□□ -2.05
Usp4P35123 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Usp4P35123 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Usp4P35123 Gm24234-201ENSMUST00000104316 107 ntBASIC2.22□□□□□ -2.05
Usp4P35123 Gm14937-201ENSMUST00000119709 208 ntBASIC2.22□□□□□ -2.05
Usp4P35123 Gm24851-201ENSMUST00000158028 103 ntBASIC2.22□□□□□ -2.05
Usp4P35123 Gm22665-201ENSMUST00000158720 275 ntBASIC2.22□□□□□ -2.05
Usp4P35123 Mir669j-201ENSMUST00000179023 121 ntBASIC2.22□□□□□ -2.05
Usp4P35123 Snora3-201ENSMUST00000083082 132 ntBASIC2.22□□□□□ -2.05
Usp4P35123 Mir322-201ENSMUST00000083484 95 ntBASIC2.22□□□□□ -2.05
Usp4P35123 Gm26168-201ENSMUST00000083787 112 ntBASIC2.22□□□□□ -2.05
Usp4P35123 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Usp4P35123 Gm12941-201ENSMUST00000117934 220 ntBASIC2.21□□□□□ -2.06
Usp4P35123 Gm13433-201ENSMUST00000121701 240 ntBASIC2.21□□□□□ -2.06
Usp4P35123 Gm22079-201ENSMUST00000157592 106 ntBASIC2.21□□□□□ -2.06
Usp4P35123 Gm24345-201ENSMUST00000158706 124 ntBASIC2.21□□□□□ -2.06
Usp4P35123 Gm7258-201ENSMUST00000179317 300 ntBASIC2.21□□□□□ -2.06
Usp4P35123 Mir6388-201ENSMUST00000184417 75 ntBASIC2.21□□□□□ -2.06
Usp4P35123 Gm42844-201ENSMUST00000200355 112 ntBASIC2.21□□□□□ -2.06
Usp4P35123 Gm25855-201ENSMUST00000082787 72 ntBASIC2.21□□□□□ -2.06
Usp4P35123 Mir489-201ENSMUST00000093599 107 ntBASIC2.21□□□□□ -2.06
Usp4P35123 Gm22558-201ENSMUST00000157326 95 ntBASIC2.2□□□□□ -2.06
Usp4P35123 Gm24718-201ENSMUST00000157521 136 ntBASIC2.2□□□□□ -2.06
Usp4P35123 Gm22387-201ENSMUST00000158191 131 ntBASIC2.2□□□□□ -2.06
Usp4P35123 Gm26004-201ENSMUST00000158804 116 ntBASIC2.2□□□□□ -2.06
Usp4P35123 Gm22070-201ENSMUST00000178475 107 ntBASIC2.2□□□□□ -2.06
Usp4P35123 Mir7009-201ENSMUST00000184519 64 ntBASIC2.2□□□□□ -2.06
Usp4P35123 Mir93-201ENSMUST00000083593 88 ntBASIC2.2□□□□□ -2.06
Usp4P35123 Mir490-201ENSMUST00000093567 84 ntBASIC2.2□□□□□ -2.06
Usp4P35123 Gm22545-201ENSMUST00000104350 132 ntBASIC2.19□□□□□ -2.06
Usp4P35123 Gm23656-201ENSMUST00000122626 112 ntBASIC2.19□□□□□ -2.06
Usp4P35123 Gm23469-201ENSMUST00000157131 104 ntBASIC2.19□□□□□ -2.06
Usp4P35123 Mir6406-201ENSMUST00000183592 120 ntBASIC2.19□□□□□ -2.06
Usp4P35123 Mir6997-201ENSMUST00000184313 71 ntBASIC2.19□□□□□ -2.06
Usp4P35123 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Usp4P35123 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.18□□□□□ -2.06
Usp4P35123 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.18□□□□□ -2.06
Usp4P35123 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Usp4P35123 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Usp4P35123 Gm22494-201ENSMUST00000104495 128 ntBASIC2.18□□□□□ -2.06
Usp4P35123 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.18□□□□□ -2.06
Usp4P35123 Gm26073-201ENSMUST00000179906 127 ntBASIC2.18□□□□□ -2.06
Usp4P35123 Mir30d-201ENSMUST00000083503 82 ntBASIC2.18□□□□□ -2.06
Usp4P35123 Mir222-201ENSMUST00000083537 79 ntBASIC2.18□□□□□ -2.06
Usp4P35123 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Usp4P35123 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Usp4P35123 Gm22803-201ENSMUST00000158049 283 ntBASIC2.17□□□□□ -2.06
Usp4P35123 Gm25367-201ENSMUST00000158846 106 ntBASIC2.17□□□□□ -2.06
Usp4P35123 Mir6928-201ENSMUST00000185166 70 ntBASIC2.17□□□□□ -2.06
Usp4P35123 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.17□□□□□ -2.06
Usp4P35123 Gm26379-202ENSMUST00000200225 132 ntBASIC2.17□□□□□ -2.06
Usp4P35123 Gm22683-201ENSMUST00000082854 137 ntBASIC2.17□□□□□ -2.06
Usp4P35123 Gm25006-201ENSMUST00000083813 107 ntBASIC2.17□□□□□ -2.06
Usp4P35123 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.17□□□□□ -2.06
Usp4P35123 Gm26081-201ENSMUST00000104068 132 ntBASIC2.16□□□□□ -2.06
Usp4P35123 Gm15289-201ENSMUST00000117793 244 ntBASIC2.16□□□□□ -2.06
Usp4P35123 Gm14946-201ENSMUST00000119859 296 ntBASIC2.16□□□□□ -2.06
Usp4P35123 Gm25364-201ENSMUST00000158851 107 ntBASIC2.16□□□□□ -2.06
Usp4P35123 Gm23813-201ENSMUST00000175153 77 ntBASIC2.16□□□□□ -2.06
Usp4P35123 Gm24656-201ENSMUST00000177548 132 ntBASIC2.16□□□□□ -2.06
Usp4P35123 Mir7017-201ENSMUST00000184894 62 ntBASIC2.16□□□□□ -2.06
Usp4P35123 Mir3569-201ENSMUST00000185080 58 ntBASIC2.16□□□□□ -2.06
Usp4P35123 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Usp4P35123 Mir497-201ENSMUST00000200557 84 ntBASIC2.16□□□□□ -2.06
Usp4P35123 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.16□□□□□ -2.06
Usp4P35123 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.06
Usp4P35123 Gm12086-201ENSMUST00000120863 228 ntBASIC2.15□□□□□ -2.07
Usp4P35123 Gm23181-201ENSMUST00000158685 110 ntBASIC2.15□□□□□ -2.07
Usp4P35123 Mir3094-201ENSMUST00000175121 64 ntBASIC2.15□□□□□ -2.07
Usp4P35123 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.15□□□□□ -2.07
Usp4P35123 Gm24412-201ENSMUST00000083426 109 ntBASIC2.15□□□□□ -2.07
Usp4P35123 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Usp4P35123 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Usp4P35123 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Usp4P35123 Gm23907-201ENSMUST00000104595 189 ntBASIC2.14□□□□□ -2.07
Usp4P35123 Gm26345-201ENSMUST00000157534 120 ntBASIC2.14□□□□□ -2.07
Usp4P35123 Gm22213-201ENSMUST00000157564 119 ntBASIC2.14□□□□□ -2.07
Usp4P35123 Gm22159-201ENSMUST00000158412 130 ntBASIC2.14□□□□□ -2.07
Usp4P35123 Gm23342-201ENSMUST00000158958 115 ntBASIC2.14□□□□□ -2.07
Usp4P35123 Mir7016-201ENSMUST00000184308 72 ntBASIC2.14□□□□□ -2.07
Usp4P35123 Gm43512-201ENSMUST00000198495 176 ntBASIC2.14□□□□□ -2.07
Usp4P35123 Gm45544-201ENSMUST00000211130 88 ntBASIC2.14□□□□□ -2.07
Usp4P35123 Snora20-201ENSMUST00000082703 128 ntBASIC2.14□□□□□ -2.07
Usp4P35123 Gm22743-201ENSMUST00000083445 133 ntBASIC2.14□□□□□ -2.07
Usp4P35123 Mir466-201ENSMUST00000093591 73 ntBASIC2.14□□□□□ -2.07
Usp4P35123 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Usp4P35123 Mir547-201ENSMUST00000102051 78 ntBASIC2.13□□□□□ -2.07
Usp4P35123 Gm24250-201ENSMUST00000157320 135 ntBASIC2.13□□□□□ -2.07
Usp4P35123 Gm24000-201ENSMUST00000158063 89 ntBASIC2.13□□□□□ -2.07
Usp4P35123 Gm25368-201ENSMUST00000158847 131 ntBASIC2.13□□□□□ -2.07
Usp4P35123 Gm23770-201ENSMUST00000178009 108 ntBASIC2.13□□□□□ -2.07
Usp4P35123 Gm22832-201ENSMUST00000178022 108 ntBASIC2.13□□□□□ -2.07
Usp4P35123 Gm23863-201ENSMUST00000178265 108 ntBASIC2.13□□□□□ -2.07
Usp4P35123 Gm24828-201ENSMUST00000178507 108 ntBASIC2.13□□□□□ -2.07
Usp4P35123 Gm23052-201ENSMUST00000178633 108 ntBASIC2.13□□□□□ -2.07
Usp4P35123 Gm25729-201ENSMUST00000179050 108 ntBASIC2.13□□□□□ -2.07
Usp4P35123 Gm25359-201ENSMUST00000179315 108 ntBASIC2.13□□□□□ -2.07
Usp4P35123 Gm22624-201ENSMUST00000179913 108 ntBASIC2.13□□□□□ -2.07
Usp4P35123 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.13□□□□□ -2.07
Usp4P35123 Mir300-201ENSMUST00000083485 79 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms