Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm26071-201ENSMUST00000083261 107 ntBASIC0.23□□□□□ -2.37
Sdc1P18828 Gm24521-201ENSMUST00000083958 107 ntBASIC0.23□□□□□ -2.37
Sdc1P18828 Gm22003-201ENSMUST00000101885 107 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 Gm25170-201ENSMUST00000104191 129 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 Gm23672-201ENSMUST00000157471 107 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 Gm22586-201ENSMUST00000157507 122 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 Gm24500-201ENSMUST00000158447 124 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 Gm24549-201ENSMUST00000158647 139 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 Gm26285-201ENSMUST00000177923 107 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 Gm23410-201ENSMUST00000179967 107 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 Gm22756-201ENSMUST00000180118 107 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 Gm27475-201ENSMUST00000183420 61 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 Mir6377-201ENSMUST00000183760 114 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 Mir7065-201ENSMUST00000185110 61 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 Gm26379-202ENSMUST00000200225 132 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.22□□□□□ -2.37
Sdc1P18828 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0.22□□□□□ -2.37
Sdc1P18828 Gm23622-201ENSMUST00000082460 107 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 Gm22505-201ENSMUST00000082956 108 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 Gm22363-201ENSMUST00000083100 108 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 Gm23814-201ENSMUST00000083230 102 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 Gm23969-201ENSMUST00000083324 74 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 Gm23095-201ENSMUST00000083446 107 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 Mir10b-201ENSMUST00000083566 68 ntBASIC0.22□□□□□ -2.37
Sdc1P18828 Gm23838-201ENSMUST00000158067 162 ntBASIC0.21□□□□□ -2.38
Sdc1P18828 Gm25241-201ENSMUST00000174909 84 ntBASIC0.21□□□□□ -2.38
Sdc1P18828 Gm26217-201ENSMUST00000175212 84 ntBASIC0.21□□□□□ -2.38
Sdc1P18828 Gm22466-201ENSMUST00000175278 69 ntBASIC0.21□□□□□ -2.38
Sdc1P18828 Gm25300-201ENSMUST00000175284 84 ntBASIC0.21□□□□□ -2.38
Sdc1P18828 Gm28579-201ENSMUST00000186143 369 ntBASIC0.21□□□□□ -2.38
Sdc1P18828 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.21□□□□□ -2.38
Sdc1P18828 Mir448-201ENSMUST00000083516 112 ntBASIC0.21□□□□□ -2.38
Sdc1P18828 Gm27668-201ENSMUST00000184188 120 ntBASIC0.2□□□□□ -2.38
Sdc1P18828 Gm44464-201ENSMUST00000198010 138 ntBASIC0.2□□□□□ -2.38
Sdc1P18828 Gm44828-201ENSMUST00000203745 106 ntBASIC0.2□□□□□ -2.38
Sdc1P18828 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.2□□□□□ -2.38
Sdc1P18828 Gm7240-201ENSMUST00000220769 664 ntBASIC0.2□□□□□ -2.38
Sdc1P18828 Gm23989-201ENSMUST00000117030 66 ntBASIC0.19□□□□□ -2.38
Sdc1P18828 Gm23991-201ENSMUST00000117033 93 ntBASIC0.19□□□□□ -2.38
Sdc1P18828 Gm25424-201ENSMUST00000157612 58 ntBASIC0.19□□□□□ -2.38
Sdc1P18828 Gm23008-201ENSMUST00000158946 80 ntBASIC0.19□□□□□ -2.38
Sdc1P18828 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.19□□□□□ -2.38
Sdc1P18828 Gm42506-201ENSMUST00000202009 150 ntBASIC0.19□□□□□ -2.38
Sdc1P18828 Gm44563-201ENSMUST00000207958 178 ntBASIC0.19□□□□□ -2.38
Sdc1P18828 Gm45616-201ENSMUST00000211711 319 ntBASIC0.19□□□□□ -2.38
Sdc1P18828 Gm26497-201ENSMUST00000083146 107 ntBASIC0.19□□□□□ -2.38
Sdc1P18828 Gm25274-201ENSMUST00000104296 135 ntBASIC0.18□□□□□ -2.38
Sdc1P18828 Gm11248-201ENSMUST00000119568 201 ntBASIC0.18□□□□□ -2.38
Sdc1P18828 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.18□□□□□ -2.38
Sdc1P18828 Gm24559-201ENSMUST00000157519 121 ntBASIC0.18□□□□□ -2.38
Sdc1P18828 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
Sdc1P18828 Gm22448-201ENSMUST00000179254 107 ntBASIC0.18□□□□□ -2.38
Sdc1P18828 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.18□□□□□ -2.38
Sdc1P18828 Gm19572-201ENSMUST00000214326 338 ntBASIC0.18□□□□□ -2.38
Sdc1P18828 AC192333.1-201ENSMUST00000224573 376 ntBASIC0.18□□□□□ -2.38
Sdc1P18828 Gm23941-201ENSMUST00000101953 107 ntBASIC0.17□□□□□ -2.38
Sdc1P18828 Gm25024-201ENSMUST00000179667 104 ntBASIC0.17□□□□□ -2.38
Sdc1P18828 Mir6365-201ENSMUST00000183990 101 ntBASIC0.17□□□□□ -2.38
Sdc1P18828 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
Sdc1P18828 Gm42594-201ENSMUST00000199511 246 ntBASIC0.17□□□□□ -2.38
Sdc1P18828 Mir7227-201ENSMUST00000200408 59 ntBASIC0.17□□□□□ -2.38
Sdc1P18828 Gm43944-201ENSMUST00000205220 120 ntBASIC0.17□□□□□ -2.38
Sdc1P18828 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.17□□□□□ -2.38
Sdc1P18828 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
Sdc1P18828 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.16□□□□□ -2.38
Sdc1P18828 Gm13922-201ENSMUST00000119505 156 ntBASIC0.16□□□□□ -2.38
Sdc1P18828 Gm24509-201ENSMUST00000157086 101 ntBASIC0.16□□□□□ -2.38
Sdc1P18828 Gm25358-201ENSMUST00000157189 101 ntBASIC0.16□□□□□ -2.38
Sdc1P18828 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.16□□□□□ -2.38
Sdc1P18828 Gm22239-201ENSMUST00000175220 103 ntBASIC0.16□□□□□ -2.38
Sdc1P18828 Mir6394-201ENSMUST00000184738 99 ntBASIC0.16□□□□□ -2.38
Sdc1P18828 Gm37997-201ENSMUST00000193515 267 ntBASIC0.16□□□□□ -2.38
Sdc1P18828 Gm44458-201ENSMUST00000196594 143 ntBASIC0.16□□□□□ -2.38
Sdc1P18828 Gm24833-201ENSMUST00000116775 120 ntBASIC0.15□□□□□ -2.39
Sdc1P18828 Gm13577-201ENSMUST00000121365 205 ntBASIC0.15□□□□□ -2.39
Sdc1P18828 Gm24635-201ENSMUST00000122712 128 ntBASIC0.15□□□□□ -2.39
Sdc1P18828 Gm22080-201ENSMUST00000157591 106 ntBASIC0.15□□□□□ -2.39
Sdc1P18828 Gm22767-201ENSMUST00000158365 165 ntBASIC0.15□□□□□ -2.39
Sdc1P18828 Gm27717-201ENSMUST00000183933 151 ntBASIC0.15□□□□□ -2.39
Sdc1P18828 AC154552.1-201ENSMUST00000222969 202 ntBASIC0.15□□□□□ -2.39
Sdc1P18828 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
Sdc1P18828 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
Sdc1P18828 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.14□□□□□ -2.39
Sdc1P18828 Gm12924-201ENSMUST00000121747 318 ntBASIC0.14□□□□□ -2.39
Sdc1P18828 Gm13797-201ENSMUST00000121792 120 ntBASIC0.14□□□□□ -2.39
Sdc1P18828 Gm25494-201ENSMUST00000158143 100 ntBASIC0.14□□□□□ -2.39
Sdc1P18828 Scarna8-201ENSMUST00000158333 131 ntBASIC0.14□□□□□ -2.39
Sdc1P18828 Gm24415-201ENSMUST00000180218 107 ntBASIC0.14□□□□□ -2.39
Sdc1P18828 Mir7010-201ENSMUST00000183464 63 ntBASIC0.14□□□□□ -2.39
Sdc1P18828 Mir6985-201ENSMUST00000184641 61 ntBASIC0.14□□□□□ -2.39
Sdc1P18828 Gm3702-201ENSMUST00000211754 346 ntBASIC0.14□□□□□ -2.39
Sdc1P18828 Gm25634-201ENSMUST00000082667 105 ntBASIC0.14□□□□□ -2.39
Sdc1P18828 Gm23321-201ENSMUST00000104465 126 ntBASIC0.13□□□□□ -2.39
Sdc1P18828 Gm12797-201ENSMUST00000118645 273 ntBASIC0.13□□□□□ -2.39
Sdc1P18828 Gm25828-201ENSMUST00000157087 95 ntBASIC0.13□□□□□ -2.39
Sdc1P18828 Gm24392-201ENSMUST00000158136 103 ntBASIC0.13□□□□□ -2.39
Sdc1P18828 Gm24728-201ENSMUST00000158226 125 ntBASIC0.13□□□□□ -2.39
Sdc1P18828 Gm26287-201ENSMUST00000158887 81 ntBASIC0.13□□□□□ -2.39
Sdc1P18828 Gm24667-201ENSMUST00000158938 103 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms