Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm24116-201ENSMUST00000103975 107 ntBASIC-0.45□□□□□ -2.48
Col1a1P11087 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.45□□□□□ -2.48
Col1a1P11087 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.45□□□□□ -2.48
Col1a1P11087 Snord116l12-201ENSMUST00000179816 94 ntBASIC-0.45□□□□□ -2.48
Col1a1P11087 Mir6350-201ENSMUST00000183639 105 ntBASIC-0.45□□□□□ -2.48
Col1a1P11087 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.45□□□□□ -2.48
Col1a1P11087 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC-0.45□□□□□ -2.48
Col1a1P11087 AC159297.2-201ENSMUST00000219567 1075 ntBASIC-0.45□□□□□ -2.48
Col1a1P11087 CT009718.4-201ENSMUST00000221881 109 ntBASIC-0.45□□□□□ -2.48
Col1a1P11087 Gm23056-201ENSMUST00000082803 111 ntBASIC-0.45□□□□□ -2.48
Col1a1P11087 Snora62-201ENSMUST00000082991 149 ntBASIC-0.45□□□□□ -2.48
Col1a1P11087 Gm24921-201ENSMUST00000083024 107 ntBASIC-0.45□□□□□ -2.48
Col1a1P11087 Gm24490-201ENSMUST00000083803 98 ntBASIC-0.45□□□□□ -2.48
Col1a1P11087 Gm26108-201ENSMUST00000083973 191 ntBASIC-0.45□□□□□ -2.48
Col1a1P11087 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.46□□□□□ -2.48
Col1a1P11087 Gm24199-201ENSMUST00000157808 136 ntBASIC-0.46□□□□□ -2.48
Col1a1P11087 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.46□□□□□ -2.48
Col1a1P11087 Gm27385-201ENSMUST00000184747 104 ntBASIC-0.46□□□□□ -2.48
Col1a1P11087 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.46□□□□□ -2.48
Col1a1P11087 Gm44063-201ENSMUST00000203307 376 ntBASIC-0.46□□□□□ -2.48
Col1a1P11087 Gm44419-201ENSMUST00000203338 229 ntBASIC-0.46□□□□□ -2.48
Col1a1P11087 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-0.46□□□□□ -2.48
Col1a1P11087 AC153541.1-201ENSMUST00000213786 294 ntBASIC-0.46□□□□□ -2.48
Col1a1P11087 AC141438.3-201ENSMUST00000215632 202 ntBASIC-0.46□□□□□ -2.48
Col1a1P11087 AC154994.1-201ENSMUST00000217395 302 ntBASIC-0.46□□□□□ -2.48
Col1a1P11087 Gm22298-201ENSMUST00000082662 133 ntBASIC-0.46□□□□□ -2.48
Col1a1P11087 Gm22827-201ENSMUST00000083766 107 ntBASIC-0.46□□□□□ -2.48
Col1a1P11087 Mir532-201ENSMUST00000093630 96 ntBASIC-0.46□□□□□ -2.48
Col1a1P11087 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.47□□□□□ -2.48
Col1a1P11087 Gm26135-201ENSMUST00000101993 72 ntBASIC-0.47□□□□□ -2.48
Col1a1P11087 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.47□□□□□ -2.48
Col1a1P11087 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.47□□□□□ -2.48
Col1a1P11087 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.47□□□□□ -2.48
Col1a1P11087 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.47□□□□□ -2.48
Col1a1P11087 Snord50b-201ENSMUST00000178497 72 ntBASIC-0.47□□□□□ -2.48
Col1a1P11087 Gm25284-201ENSMUST00000180345 141 ntBASIC-0.47□□□□□ -2.48
Col1a1P11087 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.47□□□□□ -2.48
Col1a1P11087 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC-0.47□□□□□ -2.48
Col1a1P11087 Gm9973-202ENSMUST00000220926 166 ntBASIC-0.47□□□□□ -2.48
Col1a1P11087 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.47□□□□□ -2.48
Col1a1P11087 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.47□□□□□ -2.48
Col1a1P11087 Gm24043-201ENSMUST00000083108 116 ntBASIC-0.47□□□□□ -2.48
Col1a1P11087 Mir133a-1-201ENSMUST00000083465 68 ntBASIC-0.47□□□□□ -2.48
Col1a1P11087 Snord38a-201ENSMUST00000083746 71 ntBASIC-0.47□□□□□ -2.48
Col1a1P11087 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.47□□□□□ -2.48
Col1a1P11087 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Gm26051-201ENSMUST00000104642 93 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Gm24577-201ENSMUST00000158580 63 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Gm26359-201ENSMUST00000158873 101 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Gm9593-201ENSMUST00000166034 469 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 AC155712.1-201ENSMUST00000219704 160 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Gm24509-201ENSMUST00000157086 101 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Gm25358-201ENSMUST00000157189 101 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Gm24728-201ENSMUST00000158226 125 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Gm26123-201ENSMUST00000083363 135 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Mir16-2-201ENSMUST00000083672 95 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.48□□□□□ -2.49
Col1a1P11087 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.49□□□□□ -2.49
Col1a1P11087 Gm24283-201ENSMUST00000104233 107 ntBASIC-0.49□□□□□ -2.49
Col1a1P11087 Gm24595-201ENSMUST00000122501 110 ntBASIC-0.49□□□□□ -2.49
Col1a1P11087 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.49□□□□□ -2.49
Col1a1P11087 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC-0.49□□□□□ -2.49
Col1a1P11087 Gm26090-201ENSMUST00000157897 128 ntBASIC-0.49□□□□□ -2.49
Col1a1P11087 Gm25434-201ENSMUST00000158278 167 ntBASIC-0.49□□□□□ -2.49
Col1a1P11087 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.49□□□□□ -2.49
Col1a1P11087 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.49□□□□□ -2.49
Col1a1P11087 Gm25241-201ENSMUST00000174909 84 ntBASIC-0.49□□□□□ -2.49
Col1a1P11087 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC-0.49□□□□□ -2.49
Col1a1P11087 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.49□□□□□ -2.49
Col1a1P11087 Gm44464-201ENSMUST00000198010 138 ntBASIC-0.49□□□□□ -2.49
Col1a1P11087 Gm44923-201ENSMUST00000206673 85 ntBASIC-0.49□□□□□ -2.49
Col1a1P11087 CT009550.5-201ENSMUST00000226286 382 ntBASIC-0.49□□□□□ -2.49
Col1a1P11087 Gm24459-201ENSMUST00000082730 86 ntBASIC-0.49□□□□□ -2.49
Col1a1P11087 Gm24764-201ENSMUST00000083686 199 ntBASIC-0.49□□□□□ -2.49
Col1a1P11087 Gm23039-201ENSMUST00000083870 161 ntBASIC-0.49□□□□□ -2.49
Col1a1P11087 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
Col1a1P11087 Gm12255-201ENSMUST00000117184 284 ntBASIC-0.5□□□□□ -2.49
Col1a1P11087 Gm24648-201ENSMUST00000157111 132 ntBASIC-0.5□□□□□ -2.49
Col1a1P11087 Gm23411-201ENSMUST00000157988 62 ntBASIC-0.5□□□□□ -2.49
Col1a1P11087 Gm22767-201ENSMUST00000158365 165 ntBASIC-0.5□□□□□ -2.49
Col1a1P11087 Gm23182-201ENSMUST00000158688 135 ntBASIC-0.5□□□□□ -2.49
Col1a1P11087 Gm23375-201ENSMUST00000175407 83 ntBASIC-0.5□□□□□ -2.49
Col1a1P11087 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.5□□□□□ -2.49
Col1a1P11087 Gm38261-201ENSMUST00000192608 316 ntBASIC-0.5□□□□□ -2.49
Col1a1P11087 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
Col1a1P11087 Gm24614-201ENSMUST00000083269 107 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms