Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Pcdha4O88689 Gm25697-201ENSMUST00000082902 98 ntBASIC2.11□□□□□ -2.07
Pcdha4O88689 Gm24044-201ENSMUST00000083107 156 ntBASIC2.11□□□□□ -2.07
Pcdha4O88689 Gm24261-201ENSMUST00000083744 104 ntBASIC2.11□□□□□ -2.07
Pcdha4O88689 Gm24030-201ENSMUST00000083931 164 ntBASIC2.11□□□□□ -2.07
Pcdha4O88689 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Pcdha4O88689 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Pcdha4O88689 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Pcdha4O88689 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC2.1□□□□□ -2.07
Pcdha4O88689 Mir7021-201ENSMUST00000197026 63 ntBASIC2.1□□□□□ -2.07
Pcdha4O88689 Mir7217-201ENSMUST00000200304 62 ntBASIC2.1□□□□□ -2.07
Pcdha4O88689 Gm23509-201ENSMUST00000083080 160 ntBASIC2.1□□□□□ -2.07
Pcdha4O88689 Gm23095-201ENSMUST00000083446 107 ntBASIC2.1□□□□□ -2.07
Pcdha4O88689 Gm22576-201ENSMUST00000083733 104 ntBASIC2.1□□□□□ -2.07
Pcdha4O88689 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Pcdha4O88689 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Pcdha4O88689 Snord64-201ENSMUST00000104003 67 ntBASIC2.09□□□□□ -2.07
Pcdha4O88689 Gm25113-201ENSMUST00000157185 143 ntBASIC2.09□□□□□ -2.07
Pcdha4O88689 Gm26415-201ENSMUST00000157673 292 ntBASIC2.09□□□□□ -2.07
Pcdha4O88689 Gm26864-201ENSMUST00000181346 156 ntBASIC2.09□□□□□ -2.07
Pcdha4O88689 Mir7678-201ENSMUST00000185076 71 ntBASIC2.09□□□□□ -2.07
Pcdha4O88689 Snora3-201ENSMUST00000083082 132 ntBASIC2.09□□□□□ -2.07
Pcdha4O88689 Gm25006-201ENSMUST00000083813 107 ntBASIC2.09□□□□□ -2.07
Pcdha4O88689 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.08□□□□□ -2.08
Pcdha4O88689 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Pcdha4O88689 Gm23950-201ENSMUST00000104026 129 ntBASIC2.08□□□□□ -2.08
Pcdha4O88689 Gm24907-201ENSMUST00000116932 128 ntBASIC2.08□□□□□ -2.08
Pcdha4O88689 Gm24718-201ENSMUST00000157521 136 ntBASIC2.08□□□□□ -2.08
Pcdha4O88689 Gm22554-201ENSMUST00000157798 147 ntBASIC2.08□□□□□ -2.08
Pcdha4O88689 Gm22803-201ENSMUST00000158049 283 ntBASIC2.08□□□□□ -2.08
Pcdha4O88689 Gm22387-201ENSMUST00000158191 131 ntBASIC2.08□□□□□ -2.08
Pcdha4O88689 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.08□□□□□ -2.08
Pcdha4O88689 Mir6950-201ENSMUST00000184438 73 ntBASIC2.08□□□□□ -2.08
Pcdha4O88689 Gm25820-202ENSMUST00000197479 128 ntBASIC2.08□□□□□ -2.08
Pcdha4O88689 Gm43865-201ENSMUST00000204721 127 ntBASIC2.08□□□□□ -2.08
Pcdha4O88689 Gm25402-201ENSMUST00000082966 131 ntBASIC2.08□□□□□ -2.08
Pcdha4O88689 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.08□□□□□ -2.08
Pcdha4O88689 Gm42718-201ENSMUST00000197319 2681 ntBASIC2.08□□□□□ -2.08
Pcdha4O88689 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Pcdha4O88689 Gm25090-201ENSMUST00000104000 132 ntBASIC2.07□□□□□ -2.08
Pcdha4O88689 Gm23109-201ENSMUST00000116867 126 ntBASIC2.07□□□□□ -2.08
Pcdha4O88689 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.07□□□□□ -2.08
Pcdha4O88689 Gm25769-201ENSMUST00000158569 127 ntBASIC2.07□□□□□ -2.08
Pcdha4O88689 Mir669n-201ENSMUST00000158636 54 ntBASIC2.07□□□□□ -2.08
Pcdha4O88689 Gm22708-201ENSMUST00000158987 103 ntBASIC2.07□□□□□ -2.08
Pcdha4O88689 Mir6406-201ENSMUST00000183592 120 ntBASIC2.07□□□□□ -2.08
Pcdha4O88689 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC2.07□□□□□ -2.08
Pcdha4O88689 Gm26326-201ENSMUST00000083070 129 ntBASIC2.07□□□□□ -2.08
Pcdha4O88689 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Pcdha4O88689 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Pcdha4O88689 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.06□□□□□ -2.08
Pcdha4O88689 Gm24246-201ENSMUST00000157315 132 ntBASIC2.06□□□□□ -2.08
Pcdha4O88689 Gm24842-201ENSMUST00000158681 54 ntBASIC2.06□□□□□ -2.08
Pcdha4O88689 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.06□□□□□ -2.08
Pcdha4O88689 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.06□□□□□ -2.08
Pcdha4O88689 Gm43512-201ENSMUST00000198495 176 ntBASIC2.06□□□□□ -2.08
Pcdha4O88689 Gm45544-201ENSMUST00000211130 88 ntBASIC2.06□□□□□ -2.08
Pcdha4O88689 AC147101.2-201ENSMUST00000219756 184 ntBASIC2.06□□□□□ -2.08
Pcdha4O88689 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Pcdha4O88689 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.05□□□□□ -2.08
Pcdha4O88689 Mir758-201ENSMUST00000103260 81 ntBASIC2.05□□□□□ -2.08
Pcdha4O88689 Gm26420-201ENSMUST00000104273 103 ntBASIC2.05□□□□□ -2.08
Pcdha4O88689 Gm24234-201ENSMUST00000104316 107 ntBASIC2.05□□□□□ -2.08
Pcdha4O88689 Gm14946-201ENSMUST00000119859 296 ntBASIC2.05□□□□□ -2.08
Pcdha4O88689 Gm22228-201ENSMUST00000157364 101 ntBASIC2.05□□□□□ -2.08
Pcdha4O88689 Gm23253-201ENSMUST00000157441 104 ntBASIC2.05□□□□□ -2.08
Pcdha4O88689 Snord87-201ENSMUST00000175437 87 ntBASIC2.05□□□□□ -2.08
Pcdha4O88689 Mir7683-201ENSMUST00000183842 61 ntBASIC2.05□□□□□ -2.08
Pcdha4O88689 Mir7050-201ENSMUST00000184636 60 ntBASIC2.05□□□□□ -2.08
Pcdha4O88689 Gm27544-201ENSMUST00000185069 155 ntBASIC2.05□□□□□ -2.08
Pcdha4O88689 Gm37778-201ENSMUST00000191732 190 ntBASIC2.05□□□□□ -2.08
Pcdha4O88689 Gm22683-201ENSMUST00000082854 137 ntBASIC2.05□□□□□ -2.08
Pcdha4O88689 Gm23197-201ENSMUST00000158809 112 ntBASIC2.04□□□□□ -2.08
Pcdha4O88689 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.04□□□□□ -2.08
Pcdha4O88689 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Pcdha4O88689 Gm22509-201ENSMUST00000082775 107 ntBASIC2.04□□□□□ -2.08
Pcdha4O88689 Mir490-201ENSMUST00000093567 84 ntBASIC2.04□□□□□ -2.08
Pcdha4O88689 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Pcdha4O88689 Gm15289-201ENSMUST00000117793 244 ntBASIC2.03□□□□□ -2.08
Pcdha4O88689 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.03□□□□□ -2.08
Pcdha4O88689 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.03□□□□□ -2.08
Pcdha4O88689 Gm22558-201ENSMUST00000157326 95 ntBASIC2.03□□□□□ -2.08
Pcdha4O88689 Gm22665-201ENSMUST00000158720 275 ntBASIC2.03□□□□□ -2.08
Pcdha4O88689 Gm27722-201ENSMUST00000183908 76 ntBASIC2.03□□□□□ -2.08
Pcdha4O88689 mt-Tf-201ENSMUST00000082387 68 ntBASIC2.03□□□□□ -2.08
Pcdha4O88689 Gm22283-201ENSMUST00000082556 161 ntBASIC2.03□□□□□ -2.08
Pcdha4O88689 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Pcdha4O88689 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.02□□□□□ -2.09
Pcdha4O88689 Gm22796-201ENSMUST00000157234 106 ntBASIC2.02□□□□□ -2.09
Pcdha4O88689 Gm22079-201ENSMUST00000157592 106 ntBASIC2.02□□□□□ -2.09
Pcdha4O88689 Gm24000-201ENSMUST00000158063 89 ntBASIC2.02□□□□□ -2.09
Pcdha4O88689 Gm24345-201ENSMUST00000158706 124 ntBASIC2.02□□□□□ -2.09
Pcdha4O88689 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.02□□□□□ -2.09
Pcdha4O88689 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Pcdha4O88689 BC022960-201ENSMUST00000119987 1815 ntBASIC2.01□□□□□ -2.09
Pcdha4O88689 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Pcdha4O88689 Gm25658-201ENSMUST00000158472 128 ntBASIC2.01□□□□□ -2.09
Pcdha4O88689 Gm26004-201ENSMUST00000158804 116 ntBASIC2.01□□□□□ -2.09
Pcdha4O88689 Gm25367-201ENSMUST00000158846 106 ntBASIC2.01□□□□□ -2.09
Pcdha4O88689 Gm24656-201ENSMUST00000177548 132 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 166.2 ms