Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm15068-201ENSMUST00000119796 192 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Gm13801-201ENSMUST00000120750 160 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Mir1904-201ENSMUST00000122702 80 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Gm25825-201ENSMUST00000157091 124 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Gm25914-201ENSMUST00000157618 153 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Gm24837-201ENSMUST00000158683 81 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Snord47-201ENSMUST00000083034 77 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Gm24453-201ENSMUST00000083346 76 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Gm25895-201ENSMUST00000083714 100 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
Col5a1O88207 Gm22051-201ENSMUST00000117002 127 ntBASIC0.81□□□□□ -2.28
Col5a1O88207 Gm16032-201ENSMUST00000118534 168 ntBASIC0.81□□□□□ -2.28
Col5a1O88207 Gm23665-201ENSMUST00000158054 62 ntBASIC0.81□□□□□ -2.28
Col5a1O88207 Gm23545-201ENSMUST00000158205 104 ntBASIC0.81□□□□□ -2.28
Col5a1O88207 Gm25491-201ENSMUST00000158733 308 ntBASIC0.81□□□□□ -2.28
Col5a1O88207 Gm22476-201ENSMUST00000158902 100 ntBASIC0.81□□□□□ -2.28
Col5a1O88207 Gm25834-201ENSMUST00000158916 101 ntBASIC0.81□□□□□ -2.28
Col5a1O88207 Gm23002-201ENSMUST00000179221 107 ntBASIC0.81□□□□□ -2.28
Col5a1O88207 Gm27699-201ENSMUST00000183553 180 ntBASIC0.81□□□□□ -2.28
Col5a1O88207 Gm27285-201ENSMUST00000183875 127 ntBASIC0.81□□□□□ -2.28
Col5a1O88207 Gm27878-201ENSMUST00000184000 106 ntBASIC0.81□□□□□ -2.28
Col5a1O88207 Gm38183-201ENSMUST00000193189 205 ntBASIC0.81□□□□□ -2.28
Col5a1O88207 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.81□□□□□ -2.28
Col5a1O88207 Gm24457-201ENSMUST00000083196 105 ntBASIC0.81□□□□□ -2.28
Col5a1O88207 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.81□□□□□ -2.28
Col5a1O88207 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 Gm22048-201ENSMUST00000104721 89 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 Mir293-201ENSMUST00000104841 80 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 Gm25316-201ENSMUST00000116826 118 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 Gm14674-201ENSMUST00000117816 342 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 Gm22767-201ENSMUST00000158365 165 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 Gm22075-201ENSMUST00000158599 192 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 Gm23181-201ENSMUST00000158685 110 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 Gm22663-201ENSMUST00000158721 102 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 Gm28912-201ENSMUST00000189001 234 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 CT485608.2-201ENSMUST00000227210 291 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 Gm22686-201ENSMUST00000082847 100 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 Gm22744-201ENSMUST00000083444 65 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 Gm24276-201ENSMUST00000102181 110 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 Gm20386-201ENSMUST00000174010 132 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 Gm27587-201ENSMUST00000185116 163 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 Gm23370-201ENSMUST00000199545 130 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 AC120540.2-201ENSMUST00000221716 387 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Col5a1O88207 Gm25357-201ENSMUST00000082745 72 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 Gm23100-201ENSMUST00000083455 141 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 Mir300-201ENSMUST00000083485 79 ntBASIC0.8□□□□□ -2.28
Col5a1O88207 Mir223-201ENSMUST00000102112 110 ntBASIC0.79□□□□□ -2.28
Col5a1O88207 Gm25985-201ENSMUST00000122677 107 ntBASIC0.79□□□□□ -2.28
Col5a1O88207 Gm23466-201ENSMUST00000157133 106 ntBASIC0.79□□□□□ -2.28
Col5a1O88207 Gm24668-201ENSMUST00000158935 104 ntBASIC0.79□□□□□ -2.28
Col5a1O88207 Mir3057-201ENSMUST00000175040 91 ntBASIC0.79□□□□□ -2.28
Col5a1O88207 Snord87-201ENSMUST00000175437 87 ntBASIC0.79□□□□□ -2.28
Col5a1O88207 Gm27465-201ENSMUST00000184290 91 ntBASIC0.79□□□□□ -2.28
Col5a1O88207 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Col5a1O88207 Gm34139-201ENSMUST00000196166 294 ntBASIC0.79□□□□□ -2.28
Col5a1O88207 Gm44322-201ENSMUST00000196830 115 ntBASIC0.79□□□□□ -2.28
Col5a1O88207 Gm19855-201ENSMUST00000210145 249 ntBASIC0.79□□□□□ -2.28
Col5a1O88207 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.79□□□□□ -2.28
Col5a1O88207 AC165293.1-201ENSMUST00000219669 329 ntBASIC0.79□□□□□ -2.28
Col5a1O88207 Gm25142-201ENSMUST00000082698 107 ntBASIC0.79□□□□□ -2.28
Col5a1O88207 Snord72-201ENSMUST00000104549 81 ntBASIC0.78□□□□□ -2.28
Col5a1O88207 Gm25323-201ENSMUST00000122555 103 ntBASIC0.78□□□□□ -2.28
Col5a1O88207 Gm23994-201ENSMUST00000158059 88 ntBASIC0.78□□□□□ -2.28
Col5a1O88207 Gm22768-201ENSMUST00000158366 153 ntBASIC0.78□□□□□ -2.28
Col5a1O88207 Gm16404-201ENSMUST00000177739 468 ntBASIC0.78□□□□□ -2.28
Col5a1O88207 Gm14598-201ENSMUST00000180109 468 ntBASIC0.78□□□□□ -2.28
Col5a1O88207 Gm14625-201ENSMUST00000180231 468 ntBASIC0.78□□□□□ -2.28
Col5a1O88207 Mir155-201ENSMUST00000083463 65 ntBASIC0.78□□□□□ -2.28
Col5a1O88207 Mir141-201ENSMUST00000083540 72 ntBASIC0.78□□□□□ -2.28
Col5a1O88207 Mir107-201ENSMUST00000083660 87 ntBASIC0.78□□□□□ -2.28
Col5a1O88207 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.78□□□□□ -2.28
Col5a1O88207 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.78□□□□□ -2.29
Col5a1O88207 Gm24431-201ENSMUST00000104073 66 ntBASIC0.78□□□□□ -2.29
Col5a1O88207 Gm23988-201ENSMUST00000117034 122 ntBASIC0.78□□□□□ -2.29
Col5a1O88207 Gm22482-201ENSMUST00000122563 359 ntBASIC0.78□□□□□ -2.29
Col5a1O88207 Gm23390-201ENSMUST00000157393 106 ntBASIC0.78□□□□□ -2.29
Col5a1O88207 Gm24559-201ENSMUST00000157519 121 ntBASIC0.78□□□□□ -2.29
Col5a1O88207 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.29
Col5a1O88207 Mir3086-201ENSMUST00000175072 87 ntBASIC0.78□□□□□ -2.29
Col5a1O88207 Gm27672-201ENSMUST00000183751 204 ntBASIC0.78□□□□□ -2.29
Col5a1O88207 Gm37997-201ENSMUST00000193515 267 ntBASIC0.78□□□□□ -2.29
Col5a1O88207 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.78□□□□□ -2.29
Col5a1O88207 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC0.77□□□□□ -2.29
Col5a1O88207 Gm25878-201ENSMUST00000104327 93 ntBASIC0.77□□□□□ -2.29
Col5a1O88207 Gm24132-201ENSMUST00000104745 91 ntBASIC0.77□□□□□ -2.29
Col5a1O88207 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.77□□□□□ -2.29
Col5a1O88207 Gm6952-201ENSMUST00000118629 159 ntBASIC0.77□□□□□ -2.29
Col5a1O88207 Gm14838-201ENSMUST00000118913 248 ntBASIC0.77□□□□□ -2.29
Col5a1O88207 Gm11857-201ENSMUST00000119817 324 ntBASIC0.77□□□□□ -2.29
Col5a1O88207 Gm13797-201ENSMUST00000121792 120 ntBASIC0.77□□□□□ -2.29
Col5a1O88207 Gm24851-201ENSMUST00000158028 103 ntBASIC0.77□□□□□ -2.29
Col5a1O88207 Mir1931-201ENSMUST00000158589 119 ntBASIC0.77□□□□□ -2.29
Col5a1O88207 Gm44384-201ENSMUST00000200208 114 ntBASIC0.77□□□□□ -2.29
Col5a1O88207 Mir721-201ENSMUST00000200230 88 ntBASIC0.77□□□□□ -2.29
Col5a1O88207 Snora3-201ENSMUST00000083082 132 ntBASIC0.77□□□□□ -2.29
Col5a1O88207 Mir151-201ENSMUST00000083678 68 ntBASIC0.77□□□□□ -2.29
Col5a1O88207 Gm6025-201ENSMUST00000121517 201 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms