Protein–RNA interactions for Protein: O35054

Cldn4, Claudin-4, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn4O35054 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.47□□□□□ -2.17
Cldn4O35054 AC165138.1-201ENSMUST00000226984 270 ntBASIC1.47□□□□□ -2.17
Cldn4O35054 Gm16976-205ENSMUST00000227324 226 ntBASIC1.47□□□□□ -2.17
Cldn4O35054 Mir490-201ENSMUST00000093567 84 ntBASIC1.47□□□□□ -2.17
Cldn4O35054 Gm25992-201ENSMUST00000102437 109 ntBASIC1.46□□□□□ -2.18
Cldn4O35054 Gm26018-201ENSMUST00000104406 128 ntBASIC1.46□□□□□ -2.18
Cldn4O35054 Gm16546-201ENSMUST00000159442 355 ntBASIC1.46□□□□□ -2.18
Cldn4O35054 Gm27894-201ENSMUST00000184177 92 ntBASIC1.46□□□□□ -2.18
Cldn4O35054 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Cldn4O35054 Gm44464-201ENSMUST00000198010 138 ntBASIC1.46□□□□□ -2.18
Cldn4O35054 Gm22306-201ENSMUST00000082692 107 ntBASIC1.46□□□□□ -2.18
Cldn4O35054 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Cldn4O35054 Gm24171-201ENSMUST00000104126 131 ntBASIC1.45□□□□□ -2.18
Cldn4O35054 Gm22545-201ENSMUST00000104350 132 ntBASIC1.45□□□□□ -2.18
Cldn4O35054 Snord100-201ENSMUST00000116836 74 ntBASIC1.45□□□□□ -2.18
Cldn4O35054 Gm13922-201ENSMUST00000119505 156 ntBASIC1.45□□□□□ -2.18
Cldn4O35054 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.45□□□□□ -2.18
Cldn4O35054 Gm24262-201ENSMUST00000157431 144 ntBASIC1.45□□□□□ -2.18
Cldn4O35054 Gm23208-201ENSMUST00000158666 127 ntBASIC1.45□□□□□ -2.18
Cldn4O35054 Mir6351-201ENSMUST00000183826 99 ntBASIC1.45□□□□□ -2.18
Cldn4O35054 Gm27517-201ENSMUST00000184347 236 ntBASIC1.45□□□□□ -2.18
Cldn4O35054 Gm28409-201ENSMUST00000187064 103 ntBASIC1.45□□□□□ -2.18
Cldn4O35054 Gm37116-201ENSMUST00000195161 147 ntBASIC1.45□□□□□ -2.18
Cldn4O35054 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.45□□□□□ -2.18
Cldn4O35054 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.44□□□□□ -2.18
Cldn4O35054 Gm26415-201ENSMUST00000157673 292 ntBASIC1.44□□□□□ -2.18
Cldn4O35054 Gm23080-201ENSMUST00000157846 103 ntBASIC1.44□□□□□ -2.18
Cldn4O35054 Gm23760-201ENSMUST00000158350 116 ntBASIC1.44□□□□□ -2.18
Cldn4O35054 Gm23337-201ENSMUST00000158959 118 ntBASIC1.44□□□□□ -2.18
Cldn4O35054 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Cldn4O35054 Gm27672-201ENSMUST00000183751 204 ntBASIC1.44□□□□□ -2.18
Cldn4O35054 Gm29603-201ENSMUST00000186792 334 ntBASIC1.44□□□□□ -2.18
Cldn4O35054 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.44□□□□□ -2.18
Cldn4O35054 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.44□□□□□ -2.18
Cldn4O35054 Gm25697-201ENSMUST00000082902 98 ntBASIC1.44□□□□□ -2.18
Cldn4O35054 Gm23678-201ENSMUST00000083157 107 ntBASIC1.44□□□□□ -2.18
Cldn4O35054 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Cldn4O35054 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Cldn4O35054 Gm26082-201ENSMUST00000104070 127 ntBASIC1.43□□□□□ -2.18
Cldn4O35054 Gm15069-201ENSMUST00000117792 192 ntBASIC1.43□□□□□ -2.18
Cldn4O35054 Gm15068-201ENSMUST00000119796 192 ntBASIC1.43□□□□□ -2.18
Cldn4O35054 Gm23170-201ENSMUST00000157158 106 ntBASIC1.43□□□□□ -2.18
Cldn4O35054 Gm24559-201ENSMUST00000157519 121 ntBASIC1.43□□□□□ -2.18
Cldn4O35054 Gm23996-201ENSMUST00000158062 131 ntBASIC1.43□□□□□ -2.18
Cldn4O35054 Gm22612-201ENSMUST00000158293 101 ntBASIC1.43□□□□□ -2.18
Cldn4O35054 Mir3968-201ENSMUST00000175355 100 ntBASIC1.43□□□□□ -2.18
Cldn4O35054 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Cldn4O35054 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Cldn4O35054 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.43□□□□□ -2.18
Cldn4O35054 Gm43602-201ENSMUST00000196772 300 ntBASIC1.43□□□□□ -2.18
Cldn4O35054 Gm13345-201ENSMUST00000121928 228 ntBASIC1.42□□□□□ -2.18
Cldn4O35054 Snord13-201ENSMUST00000157627 104 ntBASIC1.42□□□□□ -2.18
Cldn4O35054 Gm24054-201ENSMUST00000158619 105 ntBASIC1.42□□□□□ -2.18
Cldn4O35054 Gm22888-201ENSMUST00000158640 77 ntBASIC1.42□□□□□ -2.18
Cldn4O35054 Gm24677-201ENSMUST00000158755 150 ntBASIC1.42□□□□□ -2.18
Cldn4O35054 Gm24229-201ENSMUST00000158830 118 ntBASIC1.42□□□□□ -2.18
Cldn4O35054 Gm22699-201ENSMUST00000175376 105 ntBASIC1.42□□□□□ -2.18
Cldn4O35054 Gm45544-201ENSMUST00000211130 88 ntBASIC1.42□□□□□ -2.18
Cldn4O35054 AC168880.2-201ENSMUST00000224488 201 ntBASIC1.42□□□□□ -2.18
Cldn4O35054 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Cldn4O35054 BC022960-201ENSMUST00000119987 1815 ntBASIC1.41□□□□□ -2.18
Cldn4O35054 Gm23772-201ENSMUST00000104433 102 ntBASIC1.41□□□□□ -2.18
Cldn4O35054 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.41□□□□□ -2.18
Cldn4O35054 Gm25558-201ENSMUST00000158083 106 ntBASIC1.41□□□□□ -2.18
Cldn4O35054 Gm17020-201ENSMUST00000172274 274 ntBASIC1.41□□□□□ -2.18
Cldn4O35054 Gm24366-201ENSMUST00000175383 86 ntBASIC1.41□□□□□ -2.18
Cldn4O35054 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC1.41□□□□□ -2.18
Cldn4O35054 Gm27265-201ENSMUST00000183559 77 ntBASIC1.41□□□□□ -2.18
Cldn4O35054 Mir7063-201ENSMUST00000184158 91 ntBASIC1.41□□□□□ -2.18
Cldn4O35054 Gm42988-201ENSMUST00000198116 225 ntBASIC1.41□□□□□ -2.18
Cldn4O35054 Mir6962-201ENSMUST00000199512 63 ntBASIC1.41□□□□□ -2.18
Cldn4O35054 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.41□□□□□ -2.18
Cldn4O35054 Mir489-201ENSMUST00000093599 107 ntBASIC1.41□□□□□ -2.18
Cldn4O35054 Mir343-201ENSMUST00000102360 75 ntBASIC1.4□□□□□ -2.19
Cldn4O35054 Gm24263-201ENSMUST00000104059 107 ntBASIC1.4□□□□□ -2.19
Cldn4O35054 Gm26074-201ENSMUST00000104063 129 ntBASIC1.4□□□□□ -2.19
Cldn4O35054 Gm25878-201ENSMUST00000104327 93 ntBASIC1.4□□□□□ -2.19
Cldn4O35054 Gm25541-201ENSMUST00000116888 126 ntBASIC1.4□□□□□ -2.19
Cldn4O35054 Gm14567-201ENSMUST00000117155 174 ntBASIC1.4□□□□□ -2.19
Cldn4O35054 Gm27934-201ENSMUST00000158795 63 ntBASIC1.4□□□□□ -2.19
Cldn4O35054 Gm25936-201ENSMUST00000179952 114 ntBASIC1.4□□□□□ -2.19
Cldn4O35054 Gm18502-201ENSMUST00000218679 199 ntBASIC1.4□□□□□ -2.19
Cldn4O35054 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.4□□□□□ -2.19
Cldn4O35054 Mir201-201ENSMUST00000083470 66 ntBASIC1.4□□□□□ -2.19
Cldn4O35054 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Cldn4O35054 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
Cldn4O35054 Gm24345-201ENSMUST00000158706 124 ntBASIC1.39□□□□□ -2.19
Cldn4O35054 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.39□□□□□ -2.19
Cldn4O35054 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.39□□□□□ -2.19
Cldn4O35054 Gm25409-201ENSMUST00000083764 131 ntBASIC1.39□□□□□ -2.19
Cldn4O35054 Gm12432-201ENSMUST00000119540 186 ntBASIC1.38□□□□□ -2.19
Cldn4O35054 Gm25428-201ENSMUST00000157608 114 ntBASIC1.38□□□□□ -2.19
Cldn4O35054 Gm25423-201ENSMUST00000157609 107 ntBASIC1.38□□□□□ -2.19
Cldn4O35054 Gm22163-201ENSMUST00000158408 135 ntBASIC1.38□□□□□ -2.19
Cldn4O35054 Gm22139-201ENSMUST00000158747 105 ntBASIC1.38□□□□□ -2.19
Cldn4O35054 Gm26073-201ENSMUST00000179906 127 ntBASIC1.38□□□□□ -2.19
Cldn4O35054 Gm44962-201ENSMUST00000206460 279 ntBASIC1.38□□□□□ -2.19
Cldn4O35054 Snord14a-201ENSMUST00000082807 87 ntBASIC1.38□□□□□ -2.19
Cldn4O35054 Snord61-201ENSMUST00000083176 71 ntBASIC1.38□□□□□ -2.19
Cldn4O35054 Gm22738-201ENSMUST00000083440 147 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 403.2 ms