Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm22559-201ENSMUST00000157329 134 ntBASIC1.08□□□□□ -2.24
Trav13d-3J3QMG8 Gm22944-201ENSMUST00000158662 133 ntBASIC1.08□□□□□ -2.24
Trav13d-3J3QMG8 Snora24-201ENSMUST00000174989 130 ntBASIC1.08□□□□□ -2.24
Trav13d-3J3QMG8 Gm44483-201ENSMUST00000197203 97 ntBASIC1.08□□□□□ -2.24
Trav13d-3J3QMG8 Gm46993-201ENSMUST00000220708 259 ntBASIC1.08□□□□□ -2.24
Trav13d-3J3QMG8 Gm26224-201ENSMUST00000082506 80 ntBASIC1.08□□□□□ -2.24
Trav13d-3J3QMG8 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.08□□□□□ -2.24
Trav13d-3J3QMG8 Gm23011-201ENSMUST00000104148 132 ntBASIC1.07□□□□□ -2.24
Trav13d-3J3QMG8 Gm26090-201ENSMUST00000157897 128 ntBASIC1.07□□□□□ -2.24
Trav13d-3J3QMG8 Gm22663-201ENSMUST00000158721 102 ntBASIC1.07□□□□□ -2.24
Trav13d-3J3QMG8 Gm24880-201ENSMUST00000158776 85 ntBASIC1.07□□□□□ -2.24
Trav13d-3J3QMG8 Gm22914-201ENSMUST00000175195 77 ntBASIC1.07□□□□□ -2.24
Trav13d-3J3QMG8 Gm27365-201ENSMUST00000184041 177 ntBASIC1.07□□□□□ -2.24
Trav13d-3J3QMG8 Gm28794-201ENSMUST00000185276 136 ntBASIC1.07□□□□□ -2.24
Trav13d-3J3QMG8 Gm44358-201ENSMUST00000196301 98 ntBASIC1.07□□□□□ -2.24
Trav13d-3J3QMG8 Snora20-201ENSMUST00000082703 128 ntBASIC1.07□□□□□ -2.24
Trav13d-3J3QMG8 Mir451a-201ENSMUST00000093557 72 ntBASIC1.07□□□□□ -2.24
Trav13d-3J3QMG8 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Trav13d-3J3QMG8 Gm25938-201ENSMUST00000104139 166 ntBASIC1.06□□□□□ -2.24
Trav13d-3J3QMG8 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Trav13d-3J3QMG8 Snord100-201ENSMUST00000116836 74 ntBASIC1.06□□□□□ -2.24
Trav13d-3J3QMG8 Gm22485-201ENSMUST00000157990 109 ntBASIC1.06□□□□□ -2.24
Trav13d-3J3QMG8 Gm27898-201ENSMUST00000183987 80 ntBASIC1.06□□□□□ -2.24
Trav13d-3J3QMG8 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.06□□□□□ -2.24
Trav13d-3J3QMG8 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.06□□□□□ -2.24
Trav13d-3J3QMG8 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.06□□□□□ -2.24
Trav13d-3J3QMG8 Gm24271-201ENSMUST00000102327 111 ntBASIC1.05□□□□□ -2.24
Trav13d-3J3QMG8 Gm24015-201ENSMUST00000157725 232 ntBASIC1.05□□□□□ -2.24
Trav13d-3J3QMG8 Gm16539-201ENSMUST00000160086 327 ntBASIC1.05□□□□□ -2.24
Trav13d-3J3QMG8 Gm22259-201ENSMUST00000178926 107 ntBASIC1.05□□□□□ -2.24
Trav13d-3J3QMG8 Gm27465-201ENSMUST00000184290 91 ntBASIC1.05□□□□□ -2.24
Trav13d-3J3QMG8 Gm14567-201ENSMUST00000117155 174 ntBASIC1.04□□□□□ -2.24
Trav13d-3J3QMG8 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.04□□□□□ -2.24
Trav13d-3J3QMG8 Gm23114-201ENSMUST00000158478 117 ntBASIC1.04□□□□□ -2.24
Trav13d-3J3QMG8 Gm37586-201ENSMUST00000193654 204 ntBASIC1.04□□□□□ -2.24
Trav13d-3J3QMG8 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC1.04□□□□□ -2.24
Trav13d-3J3QMG8 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.04□□□□□ -2.24
Trav13d-3J3QMG8 Gm13345-201ENSMUST00000121928 228 ntBASIC1.03□□□□□ -2.24
Trav13d-3J3QMG8 Gm22850-201ENSMUST00000157714 82 ntBASIC1.03□□□□□ -2.24
Trav13d-3J3QMG8 Mir3098-201ENSMUST00000175416 87 ntBASIC1.03□□□□□ -2.24
Trav13d-3J3QMG8 Gm28256-201ENSMUST00000188953 139 ntBASIC1.03□□□□□ -2.24
Trav13d-3J3QMG8 Gm28559-201ENSMUST00000190532 139 ntBASIC1.03□□□□□ -2.24
Trav13d-3J3QMG8 Mir721-201ENSMUST00000200230 88 ntBASIC1.03□□□□□ -2.24
Trav13d-3J3QMG8 Gm22980-201ENSMUST00000082608 70 ntBASIC1.03□□□□□ -2.24
Trav13d-3J3QMG8 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
Trav13d-3J3QMG8 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.02□□□□□ -2.25
Trav13d-3J3QMG8 Gm22233-201ENSMUST00000157464 114 ntBASIC1.02□□□□□ -2.25
Trav13d-3J3QMG8 Gm25868-201ENSMUST00000158253 114 ntBASIC1.02□□□□□ -2.25
Trav13d-3J3QMG8 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.02□□□□□ -2.25
Trav13d-3J3QMG8 Mir3087-201ENSMUST00000199405 56 ntBASIC1.02□□□□□ -2.25
Trav13d-3J3QMG8 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Trav13d-3J3QMG8 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.02□□□□□ -2.25
Trav13d-3J3QMG8 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.01□□□□□ -2.25
Trav13d-3J3QMG8 Gm44976-201ENSMUST00000205543 261 ntBASIC1.01□□□□□ -2.25
Trav13d-3J3QMG8 Mir302d-201ENSMUST00000083513 66 ntBASIC1.01□□□□□ -2.25
Trav13d-3J3QMG8 Mir471-201ENSMUST00000093596 67 ntBASIC1.01□□□□□ -2.25
Trav13d-3J3QMG8 Gm25565-201ENSMUST00000104605 105 ntBASIC1□□□□□ -2.25
Trav13d-3J3QMG8 Gm23083-201ENSMUST00000157851 116 ntBASIC1□□□□□ -2.25
Trav13d-3J3QMG8 Gm26089-201ENSMUST00000157898 107 ntBASIC1□□□□□ -2.25
Trav13d-3J3QMG8 Gm27285-201ENSMUST00000183875 127 ntBASIC1□□□□□ -2.25
Trav13d-3J3QMG8 Gm42988-201ENSMUST00000198116 225 ntBASIC1□□□□□ -2.25
Trav13d-3J3QMG8 Gm45471-201ENSMUST00000211270 281 ntBASIC1□□□□□ -2.25
Trav13d-3J3QMG8 CT025630.1-201ENSMUST00000227901 172 ntBASIC1□□□□□ -2.25
Trav13d-3J3QMG8 Gm25851-201ENSMUST00000082794 107 ntBASIC1□□□□□ -2.25
Trav13d-3J3QMG8 Gm22999-201ENSMUST00000157082 88 ntBASIC0.99□□□□□ -2.25
Trav13d-3J3QMG8 Gm22074-201ENSMUST00000158595 113 ntBASIC0.99□□□□□ -2.25
Trav13d-3J3QMG8 Gm26029-201ENSMUST00000158659 132 ntBASIC0.99□□□□□ -2.25
Trav13d-3J3QMG8 Gm25364-201ENSMUST00000158851 107 ntBASIC0.99□□□□□ -2.25
Trav13d-3J3QMG8 Gm22476-201ENSMUST00000158902 100 ntBASIC0.99□□□□□ -2.25
Trav13d-3J3QMG8 Gm25241-201ENSMUST00000174909 84 ntBASIC0.99□□□□□ -2.25
Trav13d-3J3QMG8 Gm26217-201ENSMUST00000175212 84 ntBASIC0.99□□□□□ -2.25
Trav13d-3J3QMG8 Gm27694-201ENSMUST00000184740 86 ntBASIC0.99□□□□□ -2.25
Trav13d-3J3QMG8 Gm22515-201ENSMUST00000158273 305 ntBASIC0.98□□□□□ -2.25
Trav13d-3J3QMG8 Gm25044-201ENSMUST00000158603 104 ntBASIC0.98□□□□□ -2.25
Trav13d-3J3QMG8 Gm24221-201ENSMUST00000158833 313 ntBASIC0.98□□□□□ -2.25
Trav13d-3J3QMG8 Gm23375-201ENSMUST00000175407 83 ntBASIC0.98□□□□□ -2.25
Trav13d-3J3QMG8 Gm44396-201ENSMUST00000199843 114 ntBASIC0.98□□□□□ -2.25
Trav13d-3J3QMG8 Gm45002-201ENSMUST00000208045 120 ntBASIC0.98□□□□□ -2.25
Trav13d-3J3QMG8 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.98□□□□□ -2.25
Trav13d-3J3QMG8 Gm23461-201ENSMUST00000083265 107 ntBASIC0.98□□□□□ -2.25
Trav13d-3J3QMG8 Gm22738-201ENSMUST00000083440 147 ntBASIC0.98□□□□□ -2.25
Trav13d-3J3QMG8 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
Trav13d-3J3QMG8 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
Trav13d-3J3QMG8 Gm22195-201ENSMUST00000116861 108 ntBASIC0.97□□□□□ -2.25
Trav13d-3J3QMG8 Gm25011-201ENSMUST00000158398 126 ntBASIC0.97□□□□□ -2.25
Trav13d-3J3QMG8 Gm25771-201ENSMUST00000158565 144 ntBASIC0.97□□□□□ -2.25
Trav13d-3J3QMG8 Gm26363-201ENSMUST00000158866 83 ntBASIC0.97□□□□□ -2.25
Trav13d-3J3QMG8 Gm26360-201ENSMUST00000158872 103 ntBASIC0.97□□□□□ -2.25
Trav13d-3J3QMG8 Gm25069-201ENSMUST00000175238 86 ntBASIC0.97□□□□□ -2.25
Trav13d-3J3QMG8 Gm24415-201ENSMUST00000180218 107 ntBASIC0.97□□□□□ -2.25
Trav13d-3J3QMG8 Gm27419-201ENSMUST00000184576 109 ntBASIC0.97□□□□□ -2.25
Trav13d-3J3QMG8 Gm37116-201ENSMUST00000195161 147 ntBASIC0.97□□□□□ -2.25
Trav13d-3J3QMG8 Gm25636-201ENSMUST00000082666 133 ntBASIC0.97□□□□□ -2.25
Trav13d-3J3QMG8 Gm22809-201ENSMUST00000082743 156 ntBASIC0.97□□□□□ -2.25
Trav13d-3J3QMG8 Mir324-201ENSMUST00000083600 89 ntBASIC0.97□□□□□ -2.25
Trav13d-3J3QMG8 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Trav13d-3J3QMG8 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.96□□□□□ -2.26
Trav13d-3J3QMG8 Gm22780-201ENSMUST00000104084 132 ntBASIC0.96□□□□□ -2.26
Trav13d-3J3QMG8 Gm22557-201ENSMUST00000157804 102 ntBASIC0.96□□□□□ -2.26
Trav13d-3J3QMG8 Mir6381-201ENSMUST00000183426 87 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 196.6 ms