Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gm45268-201ENSMUST00000210046 370 ntBASIC2.47□□□□□ -2.01
Ccdc9bA3KGF9 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.47□□□□□ -2.01
Ccdc9bA3KGF9 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.47□□□□□ -2.01
Ccdc9bA3KGF9 Gm23244-201ENSMUST00000083375 92 ntBASIC2.47□□□□□ -2.01
Ccdc9bA3KGF9 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.46□□□□□ -2.01
Ccdc9bA3KGF9 Gm22332-201ENSMUST00000158072 126 ntBASIC2.46□□□□□ -2.02
Ccdc9bA3KGF9 Gm24879-201ENSMUST00000158386 143 ntBASIC2.46□□□□□ -2.02
Ccdc9bA3KGF9 Gm22429-201ENSMUST00000158553 130 ntBASIC2.46□□□□□ -2.02
Ccdc9bA3KGF9 Gm26004-201ENSMUST00000158804 116 ntBASIC2.46□□□□□ -2.02
Ccdc9bA3KGF9 Gm24736-201ENSMUST00000158862 130 ntBASIC2.46□□□□□ -2.02
Ccdc9bA3KGF9 Gm20409-201ENSMUST00000173457 130 ntBASIC2.46□□□□□ -2.02
Ccdc9bA3KGF9 Gm24656-201ENSMUST00000177548 132 ntBASIC2.46□□□□□ -2.02
Ccdc9bA3KGF9 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.46□□□□□ -2.02
Ccdc9bA3KGF9 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.46□□□□□ -2.02
Ccdc9bA3KGF9 Gm25788-201ENSMUST00000082721 131 ntBASIC2.46□□□□□ -2.02
Ccdc9bA3KGF9 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
Ccdc9bA3KGF9 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Ccdc9bA3KGF9 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Ccdc9bA3KGF9 Mir880-201ENSMUST00000104809 78 ntBASIC2.45□□□□□ -2.02
Ccdc9bA3KGF9 Gm23656-201ENSMUST00000122626 112 ntBASIC2.45□□□□□ -2.02
Ccdc9bA3KGF9 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.45□□□□□ -2.02
Ccdc9bA3KGF9 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.45□□□□□ -2.02
Ccdc9bA3KGF9 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.45□□□□□ -2.02
Ccdc9bA3KGF9 Gm22330-201ENSMUST00000158068 115 ntBASIC2.45□□□□□ -2.02
Ccdc9bA3KGF9 Gm24075-201ENSMUST00000158175 72 ntBASIC2.45□□□□□ -2.02
Ccdc9bA3KGF9 Gm23409-201ENSMUST00000158516 237 ntBASIC2.45□□□□□ -2.02
Ccdc9bA3KGF9 Gm20477-201ENSMUST00000174028 280 ntBASIC2.45□□□□□ -2.02
Ccdc9bA3KGF9 Snord93-201ENSMUST00000175580 71 ntBASIC2.45□□□□□ -2.02
Ccdc9bA3KGF9 Mir7013-201ENSMUST00000183540 72 ntBASIC2.45□□□□□ -2.02
Ccdc9bA3KGF9 Gm28270-201ENSMUST00000188550 109 ntBASIC2.45□□□□□ -2.02
Ccdc9bA3KGF9 Gm28328-201ENSMUST00000188869 109 ntBASIC2.45□□□□□ -2.02
Ccdc9bA3KGF9 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.45□□□□□ -2.02
Ccdc9bA3KGF9 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.45□□□□□ -2.02
Ccdc9bA3KGF9 AC124687.1-201ENSMUST00000221868 189 ntBASIC2.45□□□□□ -2.02
Ccdc9bA3KGF9 Snora20-201ENSMUST00000082703 128 ntBASIC2.45□□□□□ -2.02
Ccdc9bA3KGF9 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.44□□□□□ -2.02
Ccdc9bA3KGF9 Gm26421-201ENSMUST00000104279 132 ntBASIC2.44□□□□□ -2.02
Ccdc9bA3KGF9 Gm25500-201ENSMUST00000104426 123 ntBASIC2.44□□□□□ -2.02
Ccdc9bA3KGF9 Gm22031-201ENSMUST00000116945 126 ntBASIC2.44□□□□□ -2.02
Ccdc9bA3KGF9 Gm15272-201ENSMUST00000120865 233 ntBASIC2.44□□□□□ -2.02
Ccdc9bA3KGF9 Snord53-201ENSMUST00000175146 78 ntBASIC2.44□□□□□ -2.02
Ccdc9bA3KGF9 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.44□□□□□ -2.02
Ccdc9bA3KGF9 Gm44308-201ENSMUST00000197080 99 ntBASIC2.44□□□□□ -2.02
Ccdc9bA3KGF9 Gm3724-201ENSMUST00000197957 349 ntBASIC2.44□□□□□ -2.02
Ccdc9bA3KGF9 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.44□□□□□ -2.02
Ccdc9bA3KGF9 Gm45522-201ENSMUST00000210784 166 ntBASIC2.44□□□□□ -2.02
Ccdc9bA3KGF9 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.44□□□□□ -2.02
Ccdc9bA3KGF9 Gm25855-201ENSMUST00000082787 72 ntBASIC2.44□□□□□ -2.02
Ccdc9bA3KGF9 Gm26494-201ENSMUST00000083154 143 ntBASIC2.44□□□□□ -2.02
Ccdc9bA3KGF9 Mir411-201ENSMUST00000083543 82 ntBASIC2.44□□□□□ -2.02
Ccdc9bA3KGF9 Gm24493-201ENSMUST00000083805 143 ntBASIC2.44□□□□□ -2.02
Ccdc9bA3KGF9 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.44□□□□□ -2.02
Ccdc9bA3KGF9 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Ccdc9bA3KGF9 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Ccdc9bA3KGF9 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Ccdc9bA3KGF9 Gm22545-201ENSMUST00000104350 132 ntBASIC2.43□□□□□ -2.02
Ccdc9bA3KGF9 Gm24468-201ENSMUST00000104489 104 ntBASIC2.43□□□□□ -2.02
Ccdc9bA3KGF9 Gm26341-201ENSMUST00000104561 134 ntBASIC2.43□□□□□ -2.02
Ccdc9bA3KGF9 Mir669d-201ENSMUST00000104644 121 ntBASIC2.43□□□□□ -2.02
Ccdc9bA3KGF9 Gm24274-201ENSMUST00000116787 124 ntBASIC2.43□□□□□ -2.02
Ccdc9bA3KGF9 Gm24443-201ENSMUST00000157242 132 ntBASIC2.43□□□□□ -2.02
Ccdc9bA3KGF9 Mir3075-201ENSMUST00000175340 85 ntBASIC2.43□□□□□ -2.02
Ccdc9bA3KGF9 Gm27330-201ENSMUST00000184689 132 ntBASIC2.43□□□□□ -2.02
Ccdc9bA3KGF9 Gm27959-201ENSMUST00000185172 111 ntBASIC2.43□□□□□ -2.02
Ccdc9bA3KGF9 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Ccdc9bA3KGF9 Gm25022-201ENSMUST00000102205 83 ntBASIC2.42□□□□□ -2.02
Ccdc9bA3KGF9 Gm23083-201ENSMUST00000157851 116 ntBASIC2.42□□□□□ -2.02
Ccdc9bA3KGF9 Mir3086-201ENSMUST00000175072 87 ntBASIC2.42□□□□□ -2.02
Ccdc9bA3KGF9 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.42□□□□□ -2.02
Ccdc9bA3KGF9 Mir467a-6-201ENSMUST00000177790 83 ntBASIC2.42□□□□□ -2.02
Ccdc9bA3KGF9 Mir467a-3-201ENSMUST00000178082 83 ntBASIC2.42□□□□□ -2.02
Ccdc9bA3KGF9 Mir467a-7-201ENSMUST00000178635 83 ntBASIC2.42□□□□□ -2.02
Ccdc9bA3KGF9 Mir467a-10-201ENSMUST00000179320 83 ntBASIC2.42□□□□□ -2.02
Ccdc9bA3KGF9 Mir467a-5-201ENSMUST00000179352 83 ntBASIC2.42□□□□□ -2.02
Ccdc9bA3KGF9 Mir467a-2-201ENSMUST00000179447 83 ntBASIC2.42□□□□□ -2.02
Ccdc9bA3KGF9 Mir467a-9-201ENSMUST00000179752 83 ntBASIC2.42□□□□□ -2.02
Ccdc9bA3KGF9 Mir467a-4-201ENSMUST00000179923 83 ntBASIC2.42□□□□□ -2.02
Ccdc9bA3KGF9 Mir467a-8-201ENSMUST00000180070 83 ntBASIC2.42□□□□□ -2.02
Ccdc9bA3KGF9 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC2.42□□□□□ -2.02
Ccdc9bA3KGF9 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Ccdc9bA3KGF9 Gm22622-201ENSMUST00000082870 129 ntBASIC2.42□□□□□ -2.02
Ccdc9bA3KGF9 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Ccdc9bA3KGF9 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.42□□□□□ -2.02
Ccdc9bA3KGF9 Gm22638-201ENSMUST00000179674 107 ntBASIC2.41□□□□□ -2.02
Ccdc9bA3KGF9 mt-Tv-201ENSMUST00000082389 69 ntBASIC2.41□□□□□ -2.02
Ccdc9bA3KGF9 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.41□□□□□ -2.02
Ccdc9bA3KGF9 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Ccdc9bA3KGF9 Gm11856-201ENSMUST00000118712 276 ntBASIC2.4□□□□□ -2.03
Ccdc9bA3KGF9 Gm23377-201ENSMUST00000082943 126 ntBASIC2.4□□□□□ -2.03
Ccdc9bA3KGF9 Gm23507-201ENSMUST00000083078 107 ntBASIC2.4□□□□□ -2.03
Ccdc9bA3KGF9 Snora3-201ENSMUST00000083082 132 ntBASIC2.4□□□□□ -2.03
Ccdc9bA3KGF9 Mir300-201ENSMUST00000083485 79 ntBASIC2.4□□□□□ -2.03
Ccdc9bA3KGF9 Mir127-201ENSMUST00000093568 70 ntBASIC2.4□□□□□ -2.03
Ccdc9bA3KGF9 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Ccdc9bA3KGF9 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Ccdc9bA3KGF9 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Ccdc9bA3KGF9 Mir466k-201ENSMUST00000116774 122 ntBASIC2.39□□□□□ -2.03
Ccdc9bA3KGF9 Gm26090-201ENSMUST00000157897 128 ntBASIC2.39□□□□□ -2.03
Ccdc9bA3KGF9 Gm23033-201ENSMUST00000157996 134 ntBASIC2.39□□□□□ -2.03
Ccdc9bA3KGF9 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms