Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm38295-201ENSMUST00000191951 151 ntBASIC-1.12□□□□□ -2.59
Trav12-1A0N8R1 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-1.12□□□□□ -2.59
Trav12-1A0N8R1 Mir376b-201ENSMUST00000195930 82 ntBASIC-1.12□□□□□ -2.59
Trav12-1A0N8R1 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC-1.12□□□□□ -2.59
Trav12-1A0N8R1 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC-1.13□□□□□ -2.59
Trav12-1A0N8R1 Gm28766-201ENSMUST00000191086 234 ntBASIC-1.13□□□□□ -2.59
Trav12-1A0N8R1 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC-1.13□□□□□ -2.59
Trav12-1A0N8R1 Gm38213-201ENSMUST00000193203 173 ntBASIC-1.13□□□□□ -2.59
Trav12-1A0N8R1 Gm44469-201ENSMUST00000198558 79 ntBASIC-1.13□□□□□ -2.59
Trav12-1A0N8R1 Gm24340-201ENSMUST00000104208 97 ntBASIC-1.14□□□□□ -2.59
Trav12-1A0N8R1 Gm14126-201ENSMUST00000122345 395 ntBASIC-1.14□□□□□ -2.59
Trav12-1A0N8R1 Gm10548-202ENSMUST00000165672 272 ntBASIC-1.14□□□□□ -2.59
Trav12-1A0N8R1 Mir5124b-201ENSMUST00000184251 85 ntBASIC-1.14□□□□□ -2.59
Trav12-1A0N8R1 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC-1.14□□□□□ -2.59
Trav12-1A0N8R1 Gm44473-201ENSMUST00000204039 152 ntBASIC-1.14□□□□□ -2.59
Trav12-1A0N8R1 AC112972.1-201ENSMUST00000227329 365 ntBASIC-1.14□□□□□ -2.59
Trav12-1A0N8R1 Snord49b-201ENSMUST00000082503 72 ntBASIC-1.14□□□□□ -2.59
Trav12-1A0N8R1 Gm23056-201ENSMUST00000082803 111 ntBASIC-1.14□□□□□ -2.59
Trav12-1A0N8R1 Gm22827-201ENSMUST00000083766 107 ntBASIC-1.14□□□□□ -2.59
Trav12-1A0N8R1 Mir706-201ENSMUST00000102262 84 ntBASIC-1.15□□□□□ -2.59
Trav12-1A0N8R1 Gm44490-201ENSMUST00000198566 127 ntBASIC-1.15□□□□□ -2.59
Trav12-1A0N8R1 Mir18b-201ENSMUST00000103923 83 ntBASIC-1.16□□□□□ -2.6
Trav12-1A0N8R1 Gm25756-201ENSMUST00000103990 136 ntBASIC-1.16□□□□□ -2.6
Trav12-1A0N8R1 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-1.16□□□□□ -2.6
Trav12-1A0N8R1 Gm22631-201ENSMUST00000179656 94 ntBASIC-1.16□□□□□ -2.6
Trav12-1A0N8R1 Mir6346-201ENSMUST00000183982 81 ntBASIC-1.16□□□□□ -2.6
Trav12-1A0N8R1 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-1.16□□□□□ -2.6
Trav12-1A0N8R1 Gm43563-201ENSMUST00000196761 198 ntBASIC-1.16□□□□□ -2.6
Trav12-1A0N8R1 Gm22813-202ENSMUST00000200346 124 ntBASIC-1.16□□□□□ -2.6
Trav12-1A0N8R1 Gm23065-201ENSMUST00000158236 130 ntBASIC-1.17□□□□□ -2.6
Trav12-1A0N8R1 Gm28016-201ENSMUST00000184594 196 ntBASIC-1.17□□□□□ -2.6
Trav12-1A0N8R1 Gm9973-202ENSMUST00000220926 166 ntBASIC-1.17□□□□□ -2.6
Trav12-1A0N8R1 n-R5s96-201ENSMUST00000082574 124 ntBASIC-1.17□□□□□ -2.6
Trav12-1A0N8R1 Gm24030-201ENSMUST00000083931 164 ntBASIC-1.17□□□□□ -2.6
Trav12-1A0N8R1 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-1.18□□□□□ -2.6
Trav12-1A0N8R1 Snord98-201ENSMUST00000116819 65 ntBASIC-1.18□□□□□ -2.6
Trav12-1A0N8R1 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-1.18□□□□□ -2.6
Trav12-1A0N8R1 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC-1.18□□□□□ -2.6
Trav12-1A0N8R1 Gm15899-201ENSMUST00000128586 238 ntBASIC-1.18□□□□□ -2.6
Trav12-1A0N8R1 Gm25060-201ENSMUST00000157374 130 ntBASIC-1.18□□□□□ -2.6
Trav12-1A0N8R1 Gm23857-201ENSMUST00000158379 111 ntBASIC-1.18□□□□□ -2.6
Trav12-1A0N8R1 Gm24487-201ENSMUST00000178017 63 ntBASIC-1.18□□□□□ -2.6
Trav12-1A0N8R1 Gm27540-201ENSMUST00000184950 187 ntBASIC-1.18□□□□□ -2.6
Trav12-1A0N8R1 Gm5034-201ENSMUST00000199115 634 ntBASIC-1.18□□□□□ -2.6
Trav12-1A0N8R1 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC-1.18□□□□□ -2.6
Trav12-1A0N8R1 AC098718.2-201ENSMUST00000226822 285 ntBASIC-1.18□□□□□ -2.6
Trav12-1A0N8R1 Gm25797-201ENSMUST00000082640 107 ntBASIC-1.18□□□□□ -2.6
Trav12-1A0N8R1 Gm24707-201ENSMUST00000082812 107 ntBASIC-1.18□□□□□ -2.6
Trav12-1A0N8R1 Snord60-201ENSMUST00000082834 78 ntBASIC-1.18□□□□□ -2.6
Trav12-1A0N8R1 Gm24524-201ENSMUST00000082925 170 ntBASIC-1.18□□□□□ -2.6
Trav12-1A0N8R1 Mir141-201ENSMUST00000083540 72 ntBASIC-1.18□□□□□ -2.6
Trav12-1A0N8R1 Mir16-2-201ENSMUST00000083672 95 ntBASIC-1.18□□□□□ -2.6
Trav12-1A0N8R1 Gm24164-201ENSMUST00000093663 104 ntBASIC-1.18□□□□□ -2.6
Trav12-1A0N8R1 Gm25040-201ENSMUST00000103877 66 ntBASIC-1.19□□□□□ -2.6
Trav12-1A0N8R1 Mir1899-201ENSMUST00000122798 96 ntBASIC-1.19□□□□□ -2.6
Trav12-1A0N8R1 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC-1.19□□□□□ -2.6
Trav12-1A0N8R1 Gm23881-201ENSMUST00000116872 66 ntBASIC-1.2□□□□□ -2.6
Trav12-1A0N8R1 Gm22215-201ENSMUST00000157558 96 ntBASIC-1.2□□□□□ -2.6
Trav12-1A0N8R1 Gm25772-201ENSMUST00000158574 56 ntBASIC-1.2□□□□□ -2.6
Trav12-1A0N8R1 Gm23819-201ENSMUST00000158744 109 ntBASIC-1.2□□□□□ -2.6
Trav12-1A0N8R1 Gm27735-201ENSMUST00000185085 76 ntBASIC-1.2□□□□□ -2.6
Trav12-1A0N8R1 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC-1.2□□□□□ -2.6
Trav12-1A0N8R1 Gm44135-201ENSMUST00000205221 368 ntBASIC-1.2□□□□□ -2.6
Trav12-1A0N8R1 AC153541.1-201ENSMUST00000213786 294 ntBASIC-1.2□□□□□ -2.6
Trav12-1A0N8R1 Gm22652-201ENSMUST00000083207 131 ntBASIC-1.2□□□□□ -2.6
Trav12-1A0N8R1 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC-1.21□□□□□ -2.6
Trav12-1A0N8R1 Gm23253-201ENSMUST00000157441 104 ntBASIC-1.21□□□□□ -2.6
Trav12-1A0N8R1 Gm25434-201ENSMUST00000158278 167 ntBASIC-1.21□□□□□ -2.6
Trav12-1A0N8R1 Gm25693-201ENSMUST00000175443 85 ntBASIC-1.21□□□□□ -2.6
Trav12-1A0N8R1 Gm44311-201ENSMUST00000196448 69 ntBASIC-1.21□□□□□ -2.6
Trav12-1A0N8R1 Gm44419-201ENSMUST00000203338 229 ntBASIC-1.21□□□□□ -2.6
Trav12-1A0N8R1 AL772265.1-201ENSMUST00000214379 305 ntBASIC-1.21□□□□□ -2.6
Trav12-1A0N8R1 CT009550.5-201ENSMUST00000226286 382 ntBASIC-1.21□□□□□ -2.6
Trav12-1A0N8R1 Gm6293-201ENSMUST00000050339 195 ntBASIC-1.21□□□□□ -2.6
Trav12-1A0N8R1 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-1.21□□□□□ -2.6
Trav12-1A0N8R1 Mir465b-1-201ENSMUST00000103940 79 ntBASIC-1.22□□□□□ -2.6
Trav12-1A0N8R1 Gm24171-201ENSMUST00000104126 131 ntBASIC-1.22□□□□□ -2.6
Trav12-1A0N8R1 Mir465b-2-201ENSMUST00000104662 79 ntBASIC-1.22□□□□□ -2.6
Trav12-1A0N8R1 Gm24648-201ENSMUST00000157111 132 ntBASIC-1.22□□□□□ -2.6
Trav12-1A0N8R1 Gm22733-201ENSMUST00000158094 91 ntBASIC-1.22□□□□□ -2.6
Trav12-1A0N8R1 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC-1.22□□□□□ -2.6
Trav12-1A0N8R1 Gm42623-201ENSMUST00000197225 379 ntBASIC-1.22□□□□□ -2.6
Trav12-1A0N8R1 Gm35558-203ENSMUST00000222264 204 ntBASIC-1.22□□□□□ -2.6
Trav12-1A0N8R1 Gm24468-201ENSMUST00000104489 104 ntBASIC-1.23□□□□□ -2.61
Trav12-1A0N8R1 Gm23101-201ENSMUST00000157550 137 ntBASIC-1.23□□□□□ -2.61
Trav12-1A0N8R1 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-1.23□□□□□ -2.61
Trav12-1A0N8R1 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
Trav12-1A0N8R1 Gm44487-201ENSMUST00000205145 325 ntBASIC-1.23□□□□□ -2.61
Trav12-1A0N8R1 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
Trav12-1A0N8R1 Gm24929-201ENSMUST00000083403 139 ntBASIC-1.23□□□□□ -2.61
Trav12-1A0N8R1 Gm25538-201ENSMUST00000101943 107 ntBASIC-1.24□□□□□ -2.61
Trav12-1A0N8R1 Gm25431-201ENSMUST00000101978 107 ntBASIC-1.24□□□□□ -2.61
Trav12-1A0N8R1 Gm25611-201ENSMUST00000104017 133 ntBASIC-1.24□□□□□ -2.61
Trav12-1A0N8R1 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC-1.24□□□□□ -2.61
Trav12-1A0N8R1 Gm24290-201ENSMUST00000157634 96 ntBASIC-1.24□□□□□ -2.61
Trav12-1A0N8R1 Gm22085-201ENSMUST00000158344 110 ntBASIC-1.24□□□□□ -2.61
Trav12-1A0N8R1 Gm26007-201ENSMUST00000158798 120 ntBASIC-1.24□□□□□ -2.61
Trav12-1A0N8R1 Gm26359-201ENSMUST00000158873 101 ntBASIC-1.24□□□□□ -2.61
Trav12-1A0N8R1 Mir496b-201ENSMUST00000184935 113 ntBASIC-1.24□□□□□ -2.61
Trav12-1A0N8R1 Gm18242-201ENSMUST00000218455 542 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms