Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Gm26213-201ENSMUST00000158582 110 ntBASIC1.15□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm22403-201ENSMUST00000174919 84 ntBASIC1.15□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Mir3061-201ENSMUST00000175129 91 ntBASIC1.15□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm27265-201ENSMUST00000183559 77 ntBASIC1.15□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm37624-201ENSMUST00000193751 219 ntBASIC1.15□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Mir1a-2-201ENSMUST00000198520 72 ntBASIC1.15□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm23299-201ENSMUST00000082708 79 ntBASIC1.15□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Mir471-201ENSMUST00000093596 67 ntBASIC1.15□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.14□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm25274-201ENSMUST00000104296 135 ntBASIC1.14□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm6952-201ENSMUST00000118629 159 ntBASIC1.14□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm22477-201ENSMUST00000122569 316 ntBASIC1.14□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm24559-201ENSMUST00000157519 121 ntBASIC1.14□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm22963-201ENSMUST00000157960 91 ntBASIC1.14□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm24345-201ENSMUST00000158706 124 ntBASIC1.14□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm24222-201ENSMUST00000158834 93 ntBASIC1.14□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm26160-201ENSMUST00000158965 63 ntBASIC1.14□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Mir7039-201ENSMUST00000183852 85 ntBASIC1.14□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Mir721-201ENSMUST00000200230 88 ntBASIC1.14□□□□□ -2.23
Ighv3-4A0A0A6YXF1 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.14□□□□□ -2.23
Ighv3-4A0A0A6YXF1 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.14□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm22169-201ENSMUST00000083229 107 ntBASIC1.14□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm24523-201ENSMUST00000083965 132 ntBASIC1.14□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm26074-201ENSMUST00000104063 129 ntBASIC1.13□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm25878-201ENSMUST00000104327 93 ntBASIC1.13□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Mir880-201ENSMUST00000104809 78 ntBASIC1.13□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm26301-201ENSMUST00000104813 95 ntBASIC1.13□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm23328-201ENSMUST00000157418 132 ntBASIC1.13□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm26415-201ENSMUST00000157673 292 ntBASIC1.13□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm24000-201ENSMUST00000158063 89 ntBASIC1.13□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm23760-201ENSMUST00000158350 116 ntBASIC1.13□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm26073-201ENSMUST00000179906 127 ntBASIC1.13□□□□□ -2.23
Ighv3-4A0A0A6YXF1 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.13□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm24624-201ENSMUST00000082617 164 ntBASIC1.13□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Snord1a-201ENSMUST00000083160 74 ntBASIC1.13□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.13□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.13□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm25985-201ENSMUST00000122677 107 ntBASIC1.12□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm23106-201ENSMUST00000157554 101 ntBASIC1.12□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm23221-201ENSMUST00000158118 93 ntBASIC1.12□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm26038-201ENSMUST00000158151 106 ntBASIC1.12□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm25976-201ENSMUST00000158695 130 ntBASIC1.12□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm27668-201ENSMUST00000184188 120 ntBASIC1.12□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm44464-201ENSMUST00000198010 138 ntBASIC1.12□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC1.12□□□□□ -2.23
Ighv3-4A0A0A6YXF1 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.12□□□□□ -2.23
Ighv3-4A0A0A6YXF1 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.12□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm22283-201ENSMUST00000082556 161 ntBASIC1.12□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm22003-201ENSMUST00000101885 107 ntBASIC1.11□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Mir653-201ENSMUST00000102402 85 ntBASIC1.11□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm24171-201ENSMUST00000104126 131 ntBASIC1.11□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm25170-201ENSMUST00000104191 129 ntBASIC1.11□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm23636-201ENSMUST00000175070 95 ntBASIC1.11□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm22129-201ENSMUST00000179034 107 ntBASIC1.11□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm23410-201ENSMUST00000179967 107 ntBASIC1.11□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm22756-201ENSMUST00000180118 107 ntBASIC1.11□□□□□ -2.23
Ighv3-4A0A0A6YXF1 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.11□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm19790-201ENSMUST00000214414 251 ntBASIC1.11□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm18188-201ENSMUST00000219386 478 ntBASIC1.11□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm22505-201ENSMUST00000082956 108 ntBASIC1.11□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm22363-201ENSMUST00000083100 108 ntBASIC1.11□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm23814-201ENSMUST00000083230 102 ntBASIC1.11□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm23095-201ENSMUST00000083446 107 ntBASIC1.11□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Mir186-201ENSMUST00000083497 71 ntBASIC1.11□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm25409-201ENSMUST00000083764 131 ntBASIC1.11□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm22164-201ENSMUST00000158413 106 ntBASIC1.1□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm23209-201ENSMUST00000158667 110 ntBASIC1.1□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Mir1954-201ENSMUST00000175595 86 ntBASIC1.1□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm22802-201ENSMUST00000175621 89 ntBASIC1.1□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm38364-201ENSMUST00000191814 179 ntBASIC1.1□□□□□ -2.23
Ighv3-4A0A0A6YXF1 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm45544-201ENSMUST00000211130 88 ntBASIC1.1□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm24252-201ENSMUST00000083700 132 ntBASIC1.1□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm24494-201ENSMUST00000083804 81 ntBASIC1.1□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.1□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Snord100-201ENSMUST00000116836 74 ntBASIC1.09□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm24895-201ENSMUST00000122742 74 ntBASIC1.09□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm22557-201ENSMUST00000157804 102 ntBASIC1.09□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm26029-201ENSMUST00000158659 132 ntBASIC1.09□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm22476-201ENSMUST00000158902 100 ntBASIC1.09□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Traj60-201ENSMUST00000167781 54 ntBASIC1.09□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm22929-201ENSMUST00000175517 107 ntBASIC1.09□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm27672-201ENSMUST00000183751 204 ntBASIC1.09□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm27656-201ENSMUST00000185055 80 ntBASIC1.09□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Gm45471-201ENSMUST00000211270 281 ntBASIC1.09□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.09□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Snord96a-201ENSMUST00000082791 81 ntBASIC1.09□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Snord47-201ENSMUST00000083034 77 ntBASIC1.09□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Mir448-201ENSMUST00000083516 112 ntBASIC1.09□□□□□ -2.23
Ighv3-4A0A0A6YXF1 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
Ighv3-4A0A0A6YXF1 Gm25663-201ENSMUST00000157698 135 ntBASIC1.08□□□□□ -2.24
Ighv3-4A0A0A6YXF1 Gm22387-201ENSMUST00000158191 131 ntBASIC1.08□□□□□ -2.24
Ighv3-4A0A0A6YXF1 AC192091.2-201ENSMUST00000217869 117 ntBASIC1.08□□□□□ -2.24
Ighv3-4A0A0A6YXF1 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.08□□□□□ -2.24
Ighv3-4A0A0A6YXF1 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Ighv3-4A0A0A6YXF1 Gm22148-201ENSMUST00000104445 107 ntBASIC1.07□□□□□ -2.24
Ighv3-4A0A0A6YXF1 Gm14567-201ENSMUST00000117155 174 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 256.2 ms